Experiment set1IT046 for Caulobacter crescentus NA1000

Compare to:

L-Proline carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01059 +2.4 20.6 S-layer protein rsaA compare
CCNA_00699 +1.9 8.8 LSU ribosomal protein L28P compare
CCNA_01525 +1.9 8.9 flagellar biosynthesis repressor flbT compare
CCNA_02646 +1.9 3.6 cell division protein MraZ compare
CCNA_01526 +1.8 6.0 flagellar biosynthesis regulatory protein flaF compare
CCNA_01712 +1.8 14.7 CopY/TcrY family transcriptional repressor compare
CCNA_02000 +1.8 2.1 SSU ribosomal protein S2P compare
CCNA_01840 +1.8 13.3 MerR-family transcriptional regulator compare
CCNA_01361 +1.8 3.1 PepSY superfamily protein compare
CCNA_00292 +1.8 4.5 phosphate transport system permease protein pstC compare
CCNA_01790 +1.7 6.8 protein translocase subunit secG compare
CCNA_01801 +1.7 6.3 hypothetical protein compare
CCNA_01802 +1.7 3.6 hypothetical protein compare
CCNA_01804 +1.7 9.2 glutathione peroxidase compare
CCNA_02250 +1.6 3.4 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_02575 +1.6 5.0 hypothetical protein compare
CCNA_03280 +1.6 13.8 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01780 +1.6 11.5 exopolyphosphatase compare
CCNA_02644 +1.6 4.7 cell division protein FtsL compare
CCNA_02957 +1.6 6.1 ArsR-family transcriptional regulator compare
CCNA_03740 +1.6 8.2 cysteine synthase compare
CCNA_01814 +1.6 8.9 nitrogen regulation protein ntrB compare
CCNA_01771 +1.6 1.7 hypothetical protein compare
CCNA_01220 +1.6 5.4 7-keto-8-aminopelargonate synthetase compare
CCNA_02591 +1.6 6.8 glutaredoxin compare
CCNA_02252 +1.6 4.9 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_01848 +1.5 9.6 quinol cytochrome oxidase polypeptide IV compare
CCNA_01690 +1.5 4.9 MAPEG family membrane protein compare
CCNA_01826 +1.5 9.0 vitamin B12 receptor compare
CCNA_02619 +1.5 12.5 stomatin/prohibitin-related protein compare
CCNA_01742 +1.5 6.1 hypothetical protein compare
CCNA_01752 +1.5 8.3 YicC-family protein compare
CCNA_01541 +1.5 10.4 LysR-family transcriptional regulator compare
CCNA_01573 +1.5 8.0 ArsR-family transcriptional regulator compare
CCNA_02021 +1.5 6.0 hypothetical protein compare
CCNA_03951 +1.5 6.2 hypothetical protein compare
CCNA_00684 +1.5 4.7 anti-sigma factor, ChrR-family compare
CCNA_03961 +1.5 5.5 hypothetical protein compare
CCNA_02254 +1.4 6.1 isovaleryl-CoA dehydrogenase compare
CCNA_01913 +1.4 8.6 MarR-family transcriptional regulator compare
CCNA_03944 +1.4 1.9 hypothetical protein compare
CCNA_00518 +1.4 8.8 LSU ribosomal protein L25P compare
CCNA_03062 +1.4 9.9 cell wall hydrolase family protein compare
CCNA_R0037 +1.4 4.8 tRNA-Glu compare
CCNA_01061 +1.4 5.9 type I secretion adaptor protein RsaE compare
CCNA_01931 +1.4 8.1 TetR-family transcriptional regulator compare
CCNA_01684 +1.4 6.5 phenylalanine-4-hydroxylase compare
CCNA_02004 +1.4 2.7 SOS-induced inhibitor of cell division SidA compare
CCNA_03012 +1.4 7.7 peroxiredoxin compare
CCNA_00895 +1.4 8.1 hypothetical protein compare
CCNA_03959 +1.4 1.4 hypothetical protein compare
CCNA_00161 +1.4 7.2 hypothetical protein compare
CCNA_01681 +1.4 5.0 RimI-like acetyltransferase compare
CCNA_02467 +1.4 7.8 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_01583 +1.4 2.7 phosphate-binding protein compare
CCNA_03252 +1.3 10.6 CopY/TcrY-family transcriptional regulator compare
CCNA_01942 +1.3 7.3 Rrf2 family protein compare
CCNA_01619 +1.3 7.5 NYN domain protein compare
CCNA_02330 +1.3 5.2 hypothetical protein compare
CCNA_01847 +1.3 9.2 cytochrome c oxidase assembly protein Surf1 compare
CCNA_02617 +1.3 9.1 histidinol-phosphate aminotransferase compare
CCNA_02103 +1.3 9.9 hypothetical protein compare
CCNA_02324 +1.3 8.4 heat shock protein 33 hsp33 compare
CCNA_03612 +1.3 6.8 HTH XRE-family transcriptional regulator compare
CCNA_01679 +1.3 8.2 succinylglutamic semialdehyde dehydrogenase compare
CCNA_R0054 +1.3 2.8 tRNA-Gly compare
CCNA_01728 +1.3 6.5 short chain dehydrogenase compare
CCNA_03989 +1.3 9.4 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_03893 +1.3 2.8 hypothetical protein compare
CCNA_03123 +1.3 8.4 ArsR-family transcriptional regulator compare
CCNA_03214 +1.3 6.7 hypothetical protein compare
CCNA_01608 +1.3 5.5 TetR-family transcriptional regulator compare
CCNA_02576 +1.3 8.5 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_01505 +1.3 3.0 hypothetical protein compare
CCNA_03643 +1.3 1.7 succinate dehydrogenase membrane anchor subunit compare
CCNA_00726 +1.3 10.0 acyl-CoA dehydrogenase compare
CCNA_02942 +1.3 3.9 nucleoside-diphosphate-sugar epimerase compare
CCNA_02980 +1.3 8.2 tryptophan 2,3-dioxygenase compare
CCNA_00954 +1.3 9.3 AAA-family response regulator flbD compare
CCNA_01060 +1.3 5.1 type I protein secretion ATP-binding protein RsaD compare
CCNA_01979 +1.3 5.9 LexA repressor compare
CCNA_01813 +1.3 6.7 tRNA-dihydrouridine synthase compare
CCNA_03030 +1.3 6.1 cytochrome c2 compare
CCNA_01415 +1.2 8.8 methyltransferase compare
CCNA_03064 +1.2 7.9 PadR-family transcriptional regulator compare
CCNA_03271 +1.2 8.3 methionine gamma-lyase compare
CCNA_02475 +1.2 8.9 transcriptional regulator vanR compare
CCNA_00296 +1.2 6.7 phosphate regulon response regulator PhoB compare
CCNA_03287 +1.2 7.4 PadR-family transcriptional regulator compare
CCNA_01678 +1.2 6.7 arginine N-succinyltransferase, beta chain compare
CCNA_02133 +1.2 6.1 glucokinase compare
CCNA_01528 +1.2 7.0 flagellin fljK compare
CCNA_02805 +1.2 5.1 hypothetical protein compare
CCNA_01406 +1.2 5.4 metal-dependent hydrolase compare
CCNA_01181 +1.2 7.3 hypothetical protein compare
CCNA_01186 +1.2 5.8 hypothetical protein compare
CCNA_01094 +1.2 2.5 hypothetical protein compare
CCNA_01531 +1.2 8.7 acetyltransferase compare
CCNA_01751 +1.2 6.6 aminodeoxychorismate lyase compare
CCNA_01949 +1.2 4.1 bactofilin A BacA compare
CCNA_01926 +1.2 6.0 GGDEF diguanylate cyclase DgcB compare
CCNA_00950 +1.2 8.5 flagellar M-ring protein FliF compare
CCNA_02878 +1.2 1.1 hypothetical protein compare
CCNA_02616 +1.2 7.6 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01680 +1.2 6.8 succinylarginine dihydrolase compare
CCNA_02316 +1.2 6.6 hypothetical protein compare
CCNA_01596 +1.2 4.8 DNA helicase II compare
CCNA_03136 +1.2 4.3 flagellar export protein FliJ compare
CCNA_02728 +1.2 5.6 hypothetical protein compare
CCNA_00931 +1.2 7.4 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_03808 +1.1 6.9 organic solvent resistance transport system Ttg2C protein compare
CCNA_01057 +1.1 6.3 hypothetical protein compare
CCNA_03464 +1.1 4.1 glycine cleavage system H protein compare
CCNA_00147 +1.1 1.8 hypothetical protein compare
CCNA_03089 +1.1 5.6 hypothetical protein compare
CCNA_00919 +1.1 3.1 hypothetical protein compare
CCNA_02447 +1.1 8.5 PspA/IM30 family regulatory protein compare
CCNA_03515 +1.1 5.7 hypothetical protein compare
CCNA_01129 +1.1 5.8 flagellar biosynthesis protein FliQ compare
CCNA_01731 +1.1 5.6 colicin V production protein CvpA compare
CCNA_01339 +1.1 4.8 ArsR-family transcriptional regulator compare
CCNA_01827 +1.1 6.0 cobyric acid synthase CobQ compare
CCNA_00811 +1.1 5.6 TetR-family transcriptional regulator compare
CCNA_00947 +1.1 8.2 flagellar hook protein FlgE compare
CCNA_00756 +1.1 2.2 hypothetical protein compare
CCNA_03289 +1.1 5.4 HicB-family RNA-binding protein compare
CCNA_01429 +1.1 6.4 ubiquinol-cytochrome C reductase chaperone compare
CCNA_03479 +1.1 5.9 MarR-family transcriptional regulator compare
CCNA_00447 +1.1 5.8 chemotaxis protein cheD compare
CCNA_01006 +1.1 4.0 flagellar hook-basal body complex protein FliE compare
CCNA_00750 +1.1 7.8 FeaR-family transcriptional regulator compare
CCNA_03325 +1.1 3.6 hypothetical protein compare
CCNA_03964 +1.1 2.5 hypothetical protein compare
CCNA_02687 +1.1 5.6 serine-pyruvate aminotransferase compare
CCNA_00448 +1.1 6.6 cheU protein compare
CCNA_00803 +1.1 4.5 chemotaxis protein cheW compare
CCNA_02534 +1.1 2.2 hypothetical protein compare
CCNA_03043 +1.1 4.1 type IV pilin protein pilA compare
CCNA_01655 +1.1 4.9 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_00929 +1.1 8.0 Riboflavin-specific deaminase family protein compare
CCNA_00675 +1.1 4.3 VapC-like PIN domain ribonuclease compare
CCNA_03107 +1.1 6.7 cytidine deaminase compare
CCNA_01074 +1.1 2.4 entericidin B-like protein compare
CCNA_03952 +1.1 4.3 hypothetical protein compare
CCNA_01414 +1.1 6.3 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_00429 +1.1 2.1 hypothetical protein compare
CCNA_01533 +1.1 5.0 hypothetical protein compare
CCNA_03805 +1.1 7.1 PadR-family transcriptional regulator compare
CCNA_01193 +1.0 7.8 amylosucrase compare
CCNA_00944 +1.0 5.1 flagellar hook length determination protein compare
CCNA_01011 +1.0 5.1 imidazolonepropionase compare
CCNA_01433 +1.0 3.5 integration host factor alpha-subunit compare
CCNA_01116 +1.0 7.0 histidine protein kinase DivJ compare
CCNA_02614 +1.0 5.2 fumarylacetoacetase superfamily protein compare
CCNA_02448 +1.0 8.0 hypothetical protein compare
CCNA_02138 +1.0 6.1 hypothetical protein compare
CCNA_01393 +1.0 7.9 soluble lytic murein transglycosylase compare
CCNA_00505 +1.0 4.8 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_02698 +1.0 6.4 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_01173 +1.0 6.7 chorismate mutase compare
CCNA_00952 +1.0 5.6 flagellar assembly protein FlbE/FliH compare
CCNA_02841 +1.0 3.6 hypothetical protein compare
CCNA_02151 +1.0 3.7 exodeoxyribonuclease VII small subunit compare
CCNA_01575 +1.0 6.7 glucose / sorbosone dehydrogenase compare
CCNA_02732 +1.0 3.5 hypothetical protein compare
CCNA_00400 +1.0 5.0 MarR/EmrR-family transcriptional regulator compare
CCNA_00951 +1.0 6.3 flagellar motor switch protein FliG compare
CCNA_03156 +1.0 4.2 putative periplasmic protein compare
CCNA_03614 +1.0 4.3 hypothetical protein compare
CCNA_02760 +1.0 2.1 hypothetical protein compare
CCNA_01025 +1.0 6.3 hypothetical protein compare
CCNA_02297 +1.0 4.3 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_03108 +1.0 7.4 TonB-dependent outer membrane receptor compare
CCNA_02854 +1.0 3.6 two-component response regulator compare
CCNA_00322 +1.0 6.6 hypothetical protein compare
CCNA_00860 +1.0 2.7 holdfast inhibitor protein HfiA compare
CCNA_00946 +1.0 5.0 Basal-body rod modification protein FlgD compare
CCNA_03215 +1.0 6.4 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_00527 +1.0 5.6 hypothetical protein compare
CCNA_01405 +1.0 5.0 GIY-YIG domain protein compare
CCNA_00114 +1.0 4.6 MarR/EmrR-family transcriptional regulator compare
CCNA_00781 +1.0 7.5 two-component receiver protein CpdR compare
CCNA_01933 +1.0 3.5 hypothetical protein compare
CCNA_02134 +1.0 7.0 phosphogluconate dehydratase compare
CCNA_02601 +1.0 7.5 glutathione-dependent formaldehyde dehydrogenase compare
CCNA_00705 +1.0 3.2 hypothetical protein compare
CCNA_00555 +1.0 4.2 nitrogen regulatory protein P-II compare
CCNA_00028 +1.0 2.8 TonB-dependent receptor compare
CCNA_01530 +1.0 6.2 flagellin FljJ compare
CCNA_02339 +1.0 6.9 methyltransferase compare
CCNA_00129 +1.0 6.1 hypothetical protein compare
CCNA_02270 +1.0 3.0 MarR-family transcriptional regulator compare
CCNA_02567 +1.0 7.1 sensory transduction histidine kinase pleC compare
CCNA_03806 +1.0 7.0 outer membrane lipoprotein compare
CCNA_02081 +1.0 2.2 Sec-independent protein translocase protein tatB compare
CCNA_00441 +1.0 4.3 chemotaxis receiver domain protein cheYI compare
CCNA_02140 +1.0 4.1 flagellar motor switch protein fliM compare
CCNA_03636 +1.0 5.9 biotin synthase compare
CCNA_00752 +1.0 6.6 3-hydroxybutyryl-CoA dehydrogenase compare
CCNA_00443 +1.0 4.8 chemotaxis protein cheW compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in carbon source experiments

For carbon source L-Proline across organisms