Experiment set1IT045 for Rhodanobacter denitrificans FW104-10B01

R2A with Aluminum chloride hydrate 3.125 mM

Group: stress
Media: R2A + Aluminum chloride hydrate (3.125 mM)
Culturing: rhodanobacter_10B01_ML12, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
By: Trenton on 1/24/21
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate

Specific Phenotypes

For 17 genes in this experiment

For stress Aluminum chloride hydrate in Rhodanobacter denitrificans FW104-10B01

For stress Aluminum chloride hydrate across organisms

SEED Subsystems

Subsystem	#Specific
Cobalt-zinc-cadmium resistance	1
Oxidative stress	1
Peptidoglycan Biosynthesis	1
Type IV pilus	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Peptidoglycan biosynthesis
• Purine metabolism
• Lysine degradation
• Lipopolysaccharide biosynthesis
• Biotin metabolism
• Folate biosynthesis

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
peptidoglycan biosynthesis IV (Enterococcus faecium)	17	11	2
peptidoglycan biosynthesis II (staphylococci)	17	11	2
peptidoglycan biosynthesis V (β-lactam resistance)	17	10	2
peptidoglycan biosynthesis I (meso-diaminopimelate containing)	12	10	1
peptidoglycan maturation (meso-diaminopimelate containing)	12	4	1
peptidoglycan biosynthesis III (mycobacteria)	15	10	1