Experiment set1IT045 for Burkholderia phytofirmans PsJN

Compare to:

LB with Bacitracin 0.25 mg/ml

200 most important genes:

  gene name fitness t score description  
BPHYT_RS14865 -7.6 -4.7 UDP-glucose 6-dehydrogenase compare
BPHYT_RS34810 -7.0 -5.8 RND transporter compare
BPHYT_RS04370 -6.5 -2.4 glycosyl transferase compare
BPHYT_RS13245 -6.3 -6.1 hypothetical protein compare
BPHYT_RS04285 -6.1 -3.8 rhamnosyltransferase compare
BPHYT_RS17760 -5.7 -10.9 ABC transporter permease compare
BPHYT_RS12615 -5.7 -2.0 dihydrodipicolinate synthase compare
BPHYT_RS14855 -5.6 -3.4 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS06175 -5.5 -6.5 LPS biosynthesis compare
BPHYT_RS14060 -5.4 -3.3 peptidase M23 compare
BPHYT_RS04965 -5.3 -8.9 ATP-binding protein compare
BPHYT_RS33515 -5.3 -17.0 porin compare
BPHYT_RS34815 -5.3 -3.6 ABC transporter compare
BPHYT_RS34805 -5.2 -12.6 ABC transporter compare
BPHYT_RS06190 -5.2 -6.1 heptosyltransferase compare
BPHYT_RS01485 -5.0 -1.8 histidine kinase compare
BPHYT_RS18610 -4.8 -12.0 lytic transglycosylase compare
BPHYT_RS02540 -4.8 -2.4 hypothetical protein compare
BPHYT_RS15075 -4.7 -3.6 dihydrokaempferol 4-reductase compare
BPHYT_RS17745 -4.5 -8.6 toluene tolerance family protein compare
BPHYT_RS04950 -4.4 -16.3 hypothetical protein compare
BPHYT_RS29745 -4.4 -3.6 phosphonopyruvate decarboxylase compare
BPHYT_RS09315 -4.3 -1.6 chemotaxis protein CheY compare
BPHYT_RS16840 -4.3 -3.0 transketolase compare
BPHYT_RS09515 -4.3 -5.5 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS02865 -4.2 -4.1 hypothetical protein compare
BPHYT_RS33580 -4.1 -6.7 geranyltranstransferase compare
BPHYT_RS04385 -4.0 -5.8 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS08850 -4.0 -3.5 transcriptional regulator compare
BPHYT_RS04290 -3.9 -3.5 glycosyl transferase family 2 compare
BPHYT_RS04945 -3.9 -25.3 membrane protein compare
BPHYT_RS23740 -3.9 -9.8 AraC family transcriptional regulator compare
BPHYT_RS12990 -3.9 -3.6 iron transporter compare
BPHYT_RS17520 -3.9 -6.9 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS17765 -3.8 -6.2 toluene ABC transporter ATP-binding protein compare
BPHYT_RS15615 -3.8 -6.2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
BPHYT_RS18885 -3.7 -7.8 flagellar basal body rod modification protein FlgD compare
BPHYT_RS15415 -3.7 -14.8 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS18925 -3.6 -9.3 RNA polymerase sigma70 compare
BPHYT_RS03640 -3.6 -5.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS16710 -3.5 -2.2 LysR family transcriptional regulator compare
BPHYT_RS29740 -3.5 -6.3 2-aminoethylphosphonate aminotransferase compare
BPHYT_RS17035 -3.4 -6.1 sugar kinase compare
BPHYT_RS03655 -3.4 -1.7 membrane protein compare
BPHYT_RS21350 -3.4 -3.3 ADP-glucose pyrophosphorylase compare
BPHYT_RS23840 -3.4 -4.4 methyltransferase compare
BPHYT_RS21335 -3.3 -2.9 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS01435 -3.3 -20.3 LysR family transcriptional regulator compare
BPHYT_RS18800 -3.2 -9.5 flagellar hook-length control protein compare
BPHYT_RS18795 -3.2 -7.7 flagellar export protein FliJ compare
BPHYT_RS21340 -3.2 -5.6 2OG-Fe(II) oxygenase compare
BPHYT_RS29750 -3.2 -3.2 phosphoenolpyruvate phosphomutase compare
BPHYT_RS18785 -3.2 -2.5 flagellar assembly protein FliH compare
BPHYT_RS18935 -3.2 -11.5 flagellar biosynthesis regulator FlhF compare
BPHYT_RS18760 -3.1 -3.3 flagellar biosynthesis protein FliT compare
BPHYT_RS18900 -3.1 -17.3 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS17530 -3.1 -8.0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS18890 -3.0 -11.4 flagellar basal body rod protein FlgC compare
BPHYT_RS18895 -3.0 -4.4 flagellar basal body rod protein FlgB compare
BPHYT_RS09100 -3.0 -6.6 stationary phase survival protein SurE compare
BPHYT_RS17755 -3.0 -4.4 ABC transporter substrate-binding protein compare
BPHYT_RS16175 -3.0 -3.3 hemolysin D compare
BPHYT_RS18870 -2.9 -6.7 flagellar basal body rod protein FlgG compare
BPHYT_RS02860 -2.9 -1.7 membrane protein compare
BPHYT_RS18790 -2.8 -9.9 ATP synthase compare
BPHYT_RS18875 -2.8 -11.0 flagellar basal body rod protein FlgF compare
BPHYT_RS08945 -2.8 -3.9 hypothetical protein compare
BPHYT_RS08960 -2.8 -2.0 threonine synthase compare
BPHYT_RS10065 -2.8 -2.7 cytochrome C oxidase subunit I compare
BPHYT_RS18860 -2.8 -6.3 flagellar P-ring protein FlgI compare
BPHYT_RS33850 -2.7 -2.6 sporulation protein compare
BPHYT_RS07145 -2.6 -2.4 DNA-binding protein compare
BPHYT_RS36275 -2.6 -2.4 hypothetical protein compare
BPHYT_RS33840 -2.6 -8.6 amidophosphoribosyltransferase compare
BPHYT_RS18835 -2.6 -1.7 flagellar biosynthesis protein FliR compare
BPHYT_RS18865 -2.5 -5.0 flagellar L-ring protein FlgH compare
BPHYT_RS18940 -2.5 -11.9 flagellar biosynthesis protein FlhA compare
BPHYT_RS06405 -2.5 -7.9 phosphoribosylamine--glycine ligase compare
BPHYT_RS18825 -2.5 -6.9 flagellar biosynthesis protein FliP compare
BPHYT_RS02285 -2.5 -7.7 cell division protein compare
BPHYT_RS18880 -2.5 -11.5 flagellar hook protein FlgE compare
BPHYT_RS18810 -2.5 -9.4 flagellar motor switch protein FliM compare
BPHYT_RS17640 -2.4 -6.2 2-alkenal reductase compare
BPHYT_RS12055 -2.4 -13.7 phosphoenolpyruvate synthase compare
BPHYT_RS18945 -2.4 -6.8 flagellar biosynthesis protein FlhB compare
BPHYT_RS13220 -2.4 -7.6 phosphomethylpyrimidine synthase compare
BPHYT_RS16255 -2.3 -6.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS18775 -2.2 -15.4 flagellar M-ring protein FliF compare
BPHYT_RS01585 -2.2 -6.7 major facilitator superfamily protein compare
BPHYT_RS06610 -2.2 -3.1 triosephosphate isomerase compare
BPHYT_RS18590 -2.2 -1.5 hypothetical protein compare
BPHYT_RS06975 -2.2 -3.1 glutamate racemase compare
BPHYT_RS18855 -2.2 -5.4 flagellar rod assembly protein FlgJ compare
BPHYT_RS33845 -2.2 -5.1 bacteriocin production protein compare
BPHYT_RS16215 -2.2 -7.1 sensor histidine kinase compare
BPHYT_RS03175 -2.2 -7.6 sterol-binding protein compare
BPHYT_RS13080 -2.2 -2.1 hypothetical protein compare
BPHYT_RS18780 -2.1 -6.2 flagellar motor switch protein FliG compare
BPHYT_RS14920 -2.1 -4.5 hypothetical protein compare
BPHYT_RS18830 -2.1 -6.7 flagellar biosynthesis protein FliQ compare
BPHYT_RS01630 -2.1 -2.1 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS17100 -2.0 -6.6 RNA pyrophosphohydrolase compare
BPHYT_RS17890 -2.0 -2.9 shikimate kinase compare
BPHYT_RS07130 -2.0 -1.9 biopolymer transporter ExbD compare
BPHYT_RS15575 -1.9 -8.3 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
BPHYT_RS23140 -1.9 -2.6 putrescine/spermidine ABC transporter permease compare
BPHYT_RS02590 -1.9 -6.8 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS07515 -1.9 -3.3 photosystem reaction center subunit H compare
BPHYT_RS33060 -1.9 -2.3 hypothetical protein compare
BPHYT_RS03725 -1.9 -2.1 serine hydroxymethyltransferase compare
BPHYT_RS34825 -1.9 -9.9 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
BPHYT_RS16835 -1.9 -7.7 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS02610 -1.9 -6.4 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS09330 -1.9 -9.6 phytoene synthase compare
BPHYT_RS15020 -1.8 -8.3 tetratricopeptide repeat protein compare
BPHYT_RS35010 -1.8 -3.6 2-alkenal reductase compare
BPHYT_RS06195 -1.8 -2.7 membrane protein compare
BPHYT_RS16665 -1.8 -3.7 peroxiredoxin compare
BPHYT_RS12725 -1.8 -10.9 regulator compare
BPHYT_RS06075 -1.8 -7.2 hypothetical protein compare
BPHYT_RS14670 -1.7 -1.6 hypothetical protein compare
BPHYT_RS16245 -1.7 -4.5 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS14390 -1.7 -4.6 peptidase compare
BPHYT_RS04940 -1.7 -1.3 hypothetical protein compare
BPHYT_RS26685 -1.7 -1.8 precorrin-8X methylmutase compare
BPHYT_RS14945 -1.6 -4.3 phosphoglycolate phosphatase compare
BPHYT_RS03280 -1.6 -1.8 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS26355 -1.6 -1.6 hypothetical protein compare
BPHYT_RS17525 -1.6 -1.7 glutaredoxin compare
BPHYT_RS17040 -1.5 -4.8 membrane protein compare
BPHYT_RS11705 -1.5 -1.0 hypothetical protein compare
BPHYT_RS06530 -1.5 -1.8 membrane protein compare
BPHYT_RS06685 -1.5 -3.0 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS14740 -1.5 -8.7 threonine-phosphate decarboxylase compare
BPHYT_RS06585 -1.5 -10.8 hypothetical protein compare
BPHYT_RS05725 -1.5 -3.5 hypothetical protein compare
BPHYT_RS09480 -1.4 -1.1 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS07480 -1.4 -1.5 FAD-dependent oxidoreductase compare
BPHYT_RS22555 -1.4 -5.7 transcriptional regulator compare
BPHYT_RS04675 -1.4 -7.2 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS14505 -1.4 -1.8 membrane protein compare
BPHYT_RS26855 -1.4 -3.9 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS21905 -1.4 -1.3 IclR family transcriptional regulator compare
BPHYT_RS36000 -1.4 -2.7 hypothetical protein compare
BPHYT_RS13610 -1.4 -3.5 MerR family transcriptional regulator compare
BPHYT_RS20840 -1.4 -2.6 beta-lactamase compare
BPHYT_RS03285 -1.4 -6.6 aminoglycoside phosphotransferase compare
BPHYT_RS16270 -1.4 -3.4 phosphoglycerate kinase compare
BPHYT_RS30450 -1.4 -1.2 ABC transporter permease compare
BPHYT_RS06410 -1.4 -2.1 transcriptional regulator compare
BPHYT_RS08235 -1.4 -1.3 nucleoprotein, Hfg, host factor I compare
BPHYT_RS19570 -1.3 -10.0 sodium/hydrogen exchanger compare
BPHYT_RS19565 -1.3 -8.7 gamma-glutamyl:cysteine ligase compare
BPHYT_RS09105 -1.3 -2.0 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS36300 -1.3 -5.4 hypothetical protein compare
BPHYT_RS26185 -1.3 -1.5 thioesterase compare
BPHYT_RS34780 -1.3 -4.2 phytoene synthase compare
BPHYT_RS23570 -1.2 -5.0 chemotaxis protein CheY compare
BPHYT_RS12510 -1.2 -1.8 RNA-binding protein compare
BPHYT_RS33590 -1.2 -6.9 Rieske (2Fe-2S) protein compare
BPHYT_RS12785 -1.2 -2.2 Rrf2 family transcriptional regulator compare
BPHYT_RS19320 -1.2 -4.6 glycine cleavage system protein T compare
BPHYT_RS08245 -1.2 -4.3 anti-sigma factor compare
BPHYT_RS15620 -1.2 -3.1 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS19325 -1.2 -2.4 glycine cleavage system H protein compare
BPHYT_RS26025 -1.2 -1.0 hypothetical protein compare
BPHYT_RS04890 -1.2 -1.3 cobalamin biosynthesis protein CobD compare
BPHYT_RS16135 -1.2 -5.7 ABC transporter ATP-binding protein compare
BPHYT_RS16130 -1.2 -4.6 cation ABC transporter substrate-binding protein compare
BPHYT_RS28920 -1.2 -1.5 cellulose synthase compare
BPHYT_RS36220 -1.2 -1.3 hypothetical protein compare
BPHYT_RS17830 -1.2 -4.5 histidine kinase compare
BPHYT_RS16975 -1.1 -4.2 shikimate 5-dehydrogenase compare
BPHYT_RS21970 -1.1 -4.2 nucleoside hydrolase compare
BPHYT_RS31050 -1.1 -1.2 epimerase compare
BPHYT_RS31205 -1.1 -2.1 peptide ABC transporter ATP-binding protein compare
BPHYT_RS31210 -1.1 -3.1 ABC transporter substrate-binding protein compare
BPHYT_RS14370 -1.1 -1.5 ribonuclease III compare
BPHYT_RS23770 -1.1 -1.9 GntR family transcriptional regulator compare
BPHYT_RS14840 -1.1 -5.8 lytic transglycosylase compare
BPHYT_RS14680 -1.1 -2.1 peptidase C39 compare
BPHYT_RS14345 -1.1 -3.1 beta-hexosaminidase compare
BPHYT_RS11310 -1.1 -1.2 LysR family transcriptional regulator compare
BPHYT_RS28485 -1.1 -1.2 GntR family transcriptional regulator compare
BPHYT_RS34675 -1.1 -3.5 DNA-binding protein compare
BPHYT_RS20245 -1.1 -3.8 iron ABC transporter substrate-binding protein compare
BPHYT_RS05615 -1.1 -1.1 hypothetical protein compare
BPHYT_RS05610 -1.1 -6.3 DNA-cytosine methyltransferase compare
BPHYT_RS30860 -1.1 -2.0 sugar ABC transporter permease compare
BPHYT_RS03400 -1.1 -1.1 ATP-dependent DNA helicase RecG compare
BPHYT_RS34555 -1.1 -4.2 hypothetical protein compare
BPHYT_RS32880 -1.1 -1.3 alanine acetyltransferase compare
BPHYT_RS28670 -1.1 -1.3 MFS transporter compare
BPHYT_RS28305 -1.1 -1.6 protein tyrosine phosphatase compare
BPHYT_RS35005 -1.1 -2.7 molecular chaperone DnaJ compare
BPHYT_RS03155 -1.0 -2.2 histidine triad (HIT) protein compare
BPHYT_RS12480 -1.0 -4.9 hypothetical protein compare
BPHYT_RS34445 -1.0 -3.5 GntR family transcriptional regulator compare
BPHYT_RS02100 -1.0 -1.5 AsnC family transcriptional regulator compare
BPHYT_RS15205 -1.0 -6.6 hypothetical protein compare


Specific Phenotypes

For 12 genes in this experiment

For stress Bacitracin in Burkholderia phytofirmans PsJN

For stress Bacitracin across organisms