Experiment set1IT045 for Burkholderia phytofirmans PsJN

Compare to:

LB with Bacitracin 0.25 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS01795 +3.4 26.1 histidine kinase compare
BPHYT_RS01790 +3.3 25.5 LuxR family transcriptional regulator compare
BPHYT_RS33535 +3.2 29.0 RNA polymerase sigma factor RpoD compare
BPHYT_RS19025 +2.7 8.8 transcriptional regulator compare
BPHYT_RS14250 +2.7 22.8 glycosyl transferase compare
BPHYT_RS14255 +2.6 21.2 ABC transporter compare
BPHYT_RS33540 +2.5 3.2 hypothetical protein compare
BPHYT_RS14185 +2.0 7.5 transcription elongation factor GreA compare
BPHYT_RS05190 +1.6 10.3 ADP-heptose--LPS heptosyltransferase compare
BPHYT_RS03645 +1.5 5.3 tRNA dimethylallyltransferase compare
BPHYT_RS23705 +1.5 11.6 hypothetical protein compare
BPHYT_RS15715 +1.5 7.6 ATP-dependent Clp protease adapter protein ClpS compare
BPHYT_RS19020 +1.4 11.9 transcriptional regulator compare
BPHYT_RS12160 +1.3 7.2 peptide deformylase compare
BPHYT_RS03455 +1.3 4.0 paraquat-inducible protein A compare
BPHYT_RS10475 +1.3 2.5 mammalian cell entry protein compare
BPHYT_RS06550 +1.3 5.4 acetolactate synthase compare
BPHYT_RS10470 +1.3 2.9 hypothetical protein compare
BPHYT_RS14260 +1.3 9.5 trehalose-6-phosphate synthase compare
BPHYT_RS03625 +1.3 7.3 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS03470 +1.2 6.1 LysR family transcriptional regulator compare
BPHYT_RS31020 +1.2 2.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BPHYT_RS25780 +1.2 1.8 DeoR faimly transcriptional regulator compare
BPHYT_RS04450 +1.2 7.3 UDP-glucose 4-epimerase compare
BPHYT_RS10345 +1.2 1.8 flagellar motor protein MotB compare
BPHYT_RS26955 +1.1 1.7 succinylglutamate desuccinylase compare
BPHYT_RS16590 +1.1 6.7 Fis family transcriptional regulator compare
BPHYT_RS11480 +1.1 4.6 heme ABC transporter ATP-binding protein compare
BPHYT_RS17750 +1.1 8.9 VacJ family lipoprotein compare
BPHYT_RS17705 +1.1 9.2 histidinol-phosphate aminotransferase compare
BPHYT_RS19015 +1.1 7.9 flagellar motor protein MotA compare
BPHYT_RS06600 +1.1 2.7 polynucleotide phosphorylase/polyadenylase compare
BPHYT_RS20880 +1.1 1.6 polyketide cyclase compare
BPHYT_RS18910 +1.1 1.1 FlgN compare
BPHYT_RS11215 +1.1 3.9 ribose ABC transporter ATPase compare
BPHYT_RS07705 +1.1 3.6 arginine succinyltransferase compare
BPHYT_RS34745 +1.0 2.0 hypothetical protein compare
BPHYT_RS01935 +1.0 7.3 lipoprotein compare
BPHYT_RS14205 +1.0 5.3 lytic transglycosylase compare
BPHYT_RS34185 +1.0 4.1 cold-shock protein compare
BPHYT_RS05905 +1.0 1.1 hypothetical protein compare
BPHYT_RS05395 +1.0 1.7 hypothetical protein compare
BPHYT_RS09895 +1.0 1.6 LysR family transcriptional regulator compare
BPHYT_RS17545 +1.0 4.8 cold-shock protein compare
BPHYT_RS06790 +1.0 7.6 hypothetical protein compare
BPHYT_RS29920 +1.0 1.2 hypothetical protein compare
BPHYT_RS10240 +0.9 1.3 translation initiation inhibitor compare
BPHYT_RS19130 +0.9 4.2 acetyltransferase compare
BPHYT_RS04365 +0.9 6.8 membrane protein compare
BPHYT_RS03620 +0.9 4.3 poly(A) polymerase compare
BPHYT_RS29475 +0.9 2.8 carbon-phosphorus lyase complex subunit PhnJ compare
BPHYT_RS02770 +0.9 5.0 membrane protein compare
BPHYT_RS08060 +0.9 3.8 ribosome maturation factor RimP compare
BPHYT_RS12290 +0.9 2.1 universal stress protein UspA compare
BPHYT_RS19010 +0.9 3.5 flagellar motor protein MotB compare
BPHYT_RS03090 +0.9 1.3 hypothetical protein compare
BPHYT_RS03450 +0.9 3.9 paraquat-inducible protein A compare
BPHYT_RS02765 +0.9 2.6 cytochrome BD oxidase subunit I compare
BPHYT_RS18840 +0.9 6.7 flagellar hook-associated protein FlgL compare
BPHYT_RS23370 +0.9 1.9 glycosyl transferase family 1 compare
BPHYT_RS17185 +0.9 4.9 N-acetylglutamate synthase compare
BPHYT_RS14790 +0.9 3.2 D-amino acid dehydrogenase compare
BPHYT_RS35310 +0.8 1.4 GCN5 family N-acetyltransferase compare
BPHYT_RS30415 +0.8 1.9 AraC family transcriptional regulator compare
BPHYT_RS08340 +0.8 1.4 chemotaxis protein CheY compare
BPHYT_RS08615 +0.8 1.3 hypothetical protein compare
BPHYT_RS15290 +0.8 2.5 tRNA-Arg compare
BPHYT_RS25470 +0.8 1.6 alkylhydroperoxidase compare
BPHYT_RS03460 +0.8 5.1 mammalian cell entry protein compare
BPHYT_RS28930 +0.8 1.0 chromosome partitioning protein ParA compare
BPHYT_RS12430 +0.8 5.8 cysteinyl-tRNA synthetase compare
BPHYT_RS26770 +0.8 1.8 histidine kinase compare
BPHYT_RS34300 +0.8 2.6 major facilitator transporter compare
BPHYT_RS08715 +0.8 1.8 adenylyl-sulfate kinase compare
BPHYT_RS18845 +0.8 6.4 flagellar hook-associated protein FlgK compare
BPHYT_RS14450 +0.8 4.0 hypothetical protein compare
BPHYT_RS28440 +0.8 1.5 heat shock Hsp20 compare
BPHYT_RS11500 +0.8 1.8 ABC transporter permease compare
BPHYT_RS31015 +0.7 1.3 3-deoxy-manno-octulosonate cytidylyltransferase 2 compare
BPHYT_RS06855 +0.7 4.4 dTDP-4-dehydrorhamnose reductase compare
BPHYT_RS01455 +0.7 1.0 peptide deformylase compare
BPHYT_RS13285 +0.7 2.0 amino acid ABC transporter ATP-binding protein compare
BPHYT_RS07690 +0.7 2.7 AraC family transcriptional regulator compare
BPHYT_RS04425 +0.7 2.0 UDP-phosphate galactose phosphotransferase compare
BPHYT_RS33870 +0.7 3.2 DNA methylase N-4 compare
BPHYT_RS08210 +0.7 2.8 membrane protein compare
BPHYT_RS14400 +0.7 3.2 anti-sigma factor compare
BPHYT_RS16985 +0.7 2.0 esterase compare
BPHYT_RS02760 +0.7 2.6 cytochrome BD oxidase subunit II compare
BPHYT_RS12145 +0.7 4.0 methionine aminopeptidase compare
BPHYT_RS20115 +0.7 1.4 transcriptional regulator compare
BPHYT_RS12820 +0.7 4.0 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS12830 +0.7 3.3 dihydrolipoamide dehydrogenase compare
BPHYT_RS33215 +0.7 2.9 glycosyltransferase compare
BPHYT_RS11220 +0.7 1.4 LacI family transcriptional regulator compare
BPHYT_RS10980 +0.7 1.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BPHYT_RS30825 +0.7 1.6 extradiol dioxygenase compare
BPHYT_RS05010 +0.7 3.3 RpiR family transcriptional regulator compare
BPHYT_RS34970 +0.7 2.2 hypothetical protein compare
BPHYT_RS18970 +0.7 5.3 chemotaxis protein compare
BPHYT_RS29250 +0.7 1.2 dihydrodipicolinate synthase compare
BPHYT_RS31030 +0.7 2.5 tyrosine protein kinase compare
BPHYT_RS21620 +0.7 1.4 GCN5 family acetyltransferase compare
BPHYT_RS11230 +0.7 2.2 hypothetical protein compare
BPHYT_RS06985 +0.7 3.3 fumarate hydratase compare
BPHYT_RS26940 +0.7 1.9 nuclease compare
BPHYT_RS27155 +0.7 1.3 peroxiredoxin compare
BPHYT_RS00920 +0.7 2.5 transposase compare
BPHYT_RS28245 +0.7 1.5 MFS transporter compare
BPHYT_RS03465 +0.7 3.8 hypothetical protein compare
BPHYT_RS33525 +0.7 2.6 hypothetical protein compare
BPHYT_RS35980 +0.7 2.7 hypothetical protein compare
BPHYT_RS09160 +0.6 3.4 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS05515 +0.6 1.9 hypothetical protein compare
BPHYT_RS15210 +0.6 4.9 aminopeptidase N compare
BPHYT_RS16250 +0.6 1.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS25630 +0.6 2.3 glutathione S-transferase compare
BPHYT_RS03375 +0.6 1.3 NAD(P) transhydrogenase compare
BPHYT_RS23030 +0.6 1.0 gluconate 2-dehydrogenase compare
BPHYT_RS13395 +0.6 1.6 endoribonuclease L-PSP compare
BPHYT_RS06335 +0.6 1.1 CopG family transcriptional regulator compare
BPHYT_RS33220 +0.6 4.1 group 1 glycosyl transferase compare
BPHYT_RS05320 +0.6 1.2 beta-lactamase compare
BPHYT_RS26050 +0.6 1.9 ABC transporter permease compare
BPHYT_RS28410 +0.6 1.3 ubiquinol oxidase subunit II, cyanide insensitive compare
BPHYT_RS09345 +0.6 2.8 TetR family transcriptional regulator compare
BPHYT_RS19125 +0.6 3.4 short-chain dehydrogenase compare
BPHYT_RS00980 +0.6 0.8 GCN5 family acetyltransferase compare
BPHYT_RS03740 +0.6 0.8 hypothetical protein compare
BPHYT_RS32110 +0.6 1.1 transcriptional regulator compare
BPHYT_RS07835 +0.6 1.8 muconolactone delta-isomerase compare
BPHYT_RS02390 +0.6 1.3 ABC transporter substrate-binding protein compare
BPHYT_RS36060 +0.6 1.7 hypothetical protein compare
BPHYT_RS20000 +0.6 1.5 serine/threonine protein kinase compare
BPHYT_RS33680 +0.6 3.8 phosphoesterase compare
BPHYT_RS30085 +0.6 1.2 hypothetical protein compare
BPHYT_RS15165 +0.6 3.5 histidine ammonia-lyase compare
BPHYT_RS34995 +0.6 2.0 MFS transporter compare
BPHYT_RS02755 +0.6 1.4 cyd operon protein YbgT compare
BPHYT_RS27860 +0.6 1.6 membrane protein compare
BPHYT_RS02545 +0.6 2.1 nitrogen regulatory protein P-II 1 compare
BPHYT_RS35675 +0.6 1.6 short-chain dehydrogenase compare
BPHYT_RS25095 +0.6 1.6 AraC family transcriptional regulator compare
BPHYT_RS23160 +0.6 0.9 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) compare
BPHYT_RS02480 +0.6 0.8 alkaline phosphatase compare
BPHYT_RS16455 +0.6 4.4 ferritin compare
BPHYT_RS10465 +0.6 1.9 hypothetical protein compare
BPHYT_RS08135 +0.6 1.1 hypothetical protein compare
BPHYT_RS12985 +0.6 1.4 amino acid acetyltransferase compare
BPHYT_RS20095 +0.6 0.7 transcriptional regulator compare
BPHYT_RS03830 +0.6 1.6 hypothetical protein compare
BPHYT_RS22885 +0.6 1.7 hypothetical protein compare
BPHYT_RS14705 +0.6 3.8 peptidase C69 compare
BPHYT_RS16020 +0.6 1.5 AsnC family transcriptional regulator compare
BPHYT_RS36245 +0.6 2.6 hypothetical protein compare
BPHYT_RS35575 +0.6 1.1 transcriptional regulator compare
BPHYT_RS09565 +0.6 0.9 acetyl-CoA acetyltransferase compare
BPHYT_RS32240 +0.6 1.0 chromosome replication initiation inhibitor protein compare
BPHYT_RS12535 +0.6 0.8 membrane protein compare
BPHYT_RS36250 +0.6 1.9 hypothetical protein compare
BPHYT_RS01120 +0.6 1.9 plasmid partitioning protein ParB compare
BPHYT_RS13160 +0.6 1.0 membrane protein compare
BPHYT_RS30400 +0.6 1.4 amidohydrolase compare
BPHYT_RS20970 +0.6 1.3 hypothetical protein compare
BPHYT_RS35115 +0.6 1.8 phospholipase C compare
BPHYT_RS01170 +0.6 0.9 hypothetical protein compare
BPHYT_RS28535 +0.6 0.8 response regulator receiver compare
BPHYT_RS14005 +0.6 2.4 ABC transporter compare
BPHYT_RS08410 +0.6 0.8 dehydrogenase compare
BPHYT_RS15990 +0.6 2.8 heme biosynthesis protein HemY compare
BPHYT_RS12925 +0.6 0.8 exodeoxyribonuclease III compare
BPHYT_RS11635 +0.6 0.8 RNA polymerase subunit sigma-24 compare
BPHYT_RS19120 +0.6 3.0 3-oxoacyl-ACP synthase compare
BPHYT_RS20515 +0.6 1.3 alpha/beta hydrolase compare
BPHYT_RS29840 +0.6 1.2 polysaccharide biosynthesis protein compare
BPHYT_RS33160 +0.6 1.2 hypothetical protein compare
BPHYT_RS23155 +0.6 0.9 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS09560 +0.5 0.9 3-hydroxyacyl-CoA dehydrogenase compare
BPHYT_RS07380 +0.5 1.6 membrane protein compare
BPHYT_RS25480 +0.5 1.3 hypothetical protein compare
BPHYT_RS33805 +0.5 0.8 hypothetical protein compare
BPHYT_RS36495 +0.5 2.0 peptidase compare
BPHYT_RS19030 +0.5 2.9 glycosyl transferase compare
BPHYT_RS03505 +0.5 1.9 FAD-binding protein compare
BPHYT_RS11155 +0.5 0.9 hypothetical protein compare
BPHYT_RS00690 +0.5 0.8 transcriptional regulator compare
BPHYT_RS30795 +0.5 0.9 short-chain dehydrogenase compare
BPHYT_RS23940 +0.5 0.8 GntR family transcriptional regulator compare
BPHYT_RS10395 +0.5 1.3 sulfonate ABC transporter compare
BPHYT_RS23910 +0.5 0.9 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS06720 +0.5 2.5 acyl-CoA dehydrogenase compare
BPHYT_RS14785 +0.5 1.7 AsnC family transcriptional regulator compare
BPHYT_RS30140 +0.5 0.7 3-methylitaconate isomerase compare
BPHYT_RS32260 +0.5 0.8 hypothetical protein compare
BPHYT_RS06490 +0.5 1.6 membrane protein compare
BPHYT_RS26510 +0.5 0.8 transcriptional regulator compare
BPHYT_RS18515 +0.5 1.2 hypothetical protein compare
BPHYT_RS33880 +0.5 2.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS06945 +0.5 2.8 pirin compare
BPHYT_RS16815 +0.5 0.8 ureidoglycolate hydrolase compare


Specific Phenotypes

For 12 genes in this experiment

For stress Bacitracin in Burkholderia phytofirmans PsJN

For stress Bacitracin across organisms