Experiment set1IT044 for Caulobacter crescentus NA1000

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03281 +6.4 37.8 AsnC-family transcriptional regulator compare
CCNA_00684 +2.6 6.3 anti-sigma factor, ChrR-family compare
CCNA_02646 +2.6 5.0 cell division protein MraZ compare
CCNA_02644 +2.2 8.4 cell division protein FtsL compare
CCNA_02270 +2.1 7.4 MarR-family transcriptional regulator compare
CCNA_02028 +2.0 3.2 NTF2 superfamily protein compare
CCNA_00280 +2.0 15.8 tRNA pseudouridine synthase A compare
CCNA_02250 +1.9 3.9 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_00781 +1.9 14.8 two-component receiver protein CpdR compare
CCNA_03524 +1.9 11.7 di-/tripeptide transporter compare
CCNA_00296 +1.8 7.4 phosphate regulon response regulator PhoB compare
CCNA_03713 +1.8 11.1 RNA polymerase sigma-54 factor rpoN compare
CCNA_01918 +1.8 10.6 cyclic di-GMP effector protein PopA compare
CCNA_01526 +1.7 6.5 flagellar biosynthesis regulatory protein flaF compare
CCNA_00264 +1.7 10.4 C4-dicarboxylate transport protein compare
CCNA_01593 +1.7 10.4 Xaa-pro aminopeptidase compare
CCNA_03280 +1.7 14.5 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01061 +1.6 7.1 type I secretion adaptor protein RsaE compare
CCNA_00255 +1.6 3.2 esterase compare
CCNA_01060 +1.6 7.8 type I protein secretion ATP-binding protein RsaD compare
CCNA_00951 +1.6 9.6 flagellar motor switch protein FliG compare
CCNA_03404 +1.6 8.6 regulator of CtrA degradation RcdA compare
CCNA_02534 +1.6 3.5 hypothetical protein compare
CCNA_02254 +1.5 6.0 isovaleryl-CoA dehydrogenase compare
CCNA_01525 +1.5 6.3 flagellar biosynthesis repressor flbT compare
CCNA_02416 +1.5 8.7 DNA-binding protein HU compare
CCNA_00147 +1.5 2.7 hypothetical protein compare
CCNA_02021 +1.4 5.5 hypothetical protein compare
CCNA_02026 +1.4 4.9 hypothetical protein compare
CCNA_R0026 +1.4 1.2 tRNA-Gly compare
CCNA_02151 +1.4 4.0 exodeoxyribonuclease VII small subunit compare
CCNA_02138 +1.4 8.2 hypothetical protein compare
CCNA_03136 +1.4 5.2 flagellar export protein FliJ compare
CCNA_01848 +1.4 6.7 quinol cytochrome oxidase polypeptide IV compare
CCNA_01801 +1.4 5.8 hypothetical protein compare
CCNA_02030 +1.4 3.4 hypothetical protein compare
CCNA_02324 +1.4 8.4 heat shock protein 33 hsp33 compare
CCNA_01804 +1.4 8.1 glutathione peroxidase compare
CCNA_01802 +1.4 3.4 hypothetical protein compare
CCNA_03424 +1.4 9.1 AAA-family response regulator tacA compare
CCNA_03012 +1.4 7.5 peroxiredoxin compare
CCNA_00952 +1.4 6.9 flagellar assembly protein FlbE/FliH compare
CCNA_03498 +1.4 8.5 MarR-family transcriptional regulator compare
CCNA_02619 +1.4 11.4 stomatin/prohibitin-related protein compare
CCNA_01129 +1.4 6.4 flagellar biosynthesis protein FliQ compare
CCNA_00950 +1.3 9.8 flagellar M-ring protein FliF compare
CCNA_02140 +1.3 6.5 flagellar motor switch protein fliM compare
CCNA_01006 +1.3 5.5 flagellar hook-basal body complex protein FliE compare
CCNA_00954 +1.3 9.5 AAA-family response regulator flbD compare
CCNA_03961 +1.3 6.2 hypothetical protein compare
CCNA_02252 +1.3 3.9 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_01059 +1.3 9.6 S-layer protein rsaA compare
CCNA_03135 +1.3 9.0 flagellum-specific ATP synthase fliL compare
CCNA_01681 +1.2 4.9 RimI-like acetyltransferase compare
CCNA_02025 +1.2 7.2 hypothetical protein compare
CCNA_02316 +1.2 5.2 hypothetical protein compare
CCNA_01712 +1.2 8.6 CopY/TcrY family transcriptional repressor compare
CCNA_00953 +1.2 4.0 flagellar motor switch protein FliN compare
CCNA_01840 +1.2 9.3 MerR-family transcriptional regulator compare
CCNA_02103 +1.2 7.1 hypothetical protein compare
CCNA_00006 +1.2 7.2 enoyl-CoA hydratase compare
CCNA_03810 +1.2 8.6 organic solvent resistance transport system ATP-binding protein compare
CCNA_01414 +1.2 7.0 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_03271 +1.2 7.7 methionine gamma-lyase compare
CCNA_02942 +1.1 3.2 nucleoside-diphosphate-sugar epimerase compare
CCNA_03806 +1.1 8.3 outer membrane lipoprotein compare
CCNA_03808 +1.1 7.7 organic solvent resistance transport system Ttg2C protein compare
CCNA_00362 +1.1 2.9 zinc uptake regulation protein compare
CCNA_00485 +1.1 8.7 ribosomal large subunit pseudouridine synthase D compare
CCNA_01780 +1.1 7.8 exopolyphosphatase compare
CCNA_03400 +1.1 3.1 hypothetical protein compare
CCNA_01002 +1.1 6.1 flagellar biosyntheis protein FliP compare
CCNA_00429 +1.1 2.8 hypothetical protein compare
CCNA_01220 +1.1 3.8 7-keto-8-aminopelargonate synthetase compare
CCNA_01931 +1.1 6.5 TetR-family transcriptional regulator compare
CCNA_01507 +1.1 6.6 cystine transport system permease protein compare
CCNA_01508 +1.1 6.4 cystine-binding protein compare
CCNA_02447 +1.1 8.3 PspA/IM30 family regulatory protein compare
CCNA_01506 +1.1 6.4 cystine transport ATP-binding protein compare
CCNA_03790 +1.1 4.8 hypothetical protein compare
CCNA_02448 +1.1 8.1 hypothetical protein compare
CCNA_02066 +1.1 5.3 phytoene/squalene synthase family protein compare
CCNA_03948 +1.1 1.6 hypothetical protein compare
CCNA_00947 +1.1 8.1 flagellar hook protein FlgE compare
CCNA_01913 +1.0 6.3 MarR-family transcriptional regulator compare
CCNA_03275 +1.0 1.5 hypothetical protein compare
CCNA_01619 +1.0 5.8 NYN domain protein compare
CCNA_03689 +1.0 7.8 alanine dehydrogenase compare
CCNA_01393 +1.0 8.5 soluble lytic murein transglycosylase compare
CCNA_00944 +1.0 5.1 flagellar hook length determination protein compare
CCNA_01742 +1.0 4.2 hypothetical protein compare
CCNA_01942 +1.0 4.6 Rrf2 family protein compare
CCNA_02546 +1.0 7.0 GGDEF/response regulator protein PleD compare
CCNA_01847 +1.0 7.6 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01541 +1.0 7.3 LysR-family transcriptional regulator compare
CCNA_01295 +1.0 7.7 integral membrane protein compare
CCNA_01655 +1.0 4.8 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_03129 +1.0 7.4 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01754 +1.0 3.0 transglycosylase associated protein compare
CCNA_03811 +1.0 5.9 LysR-family transcriptional regulator compare
CCNA_01684 +1.0 4.7 phenylalanine-4-hydroxylase compare
CCNA_00847 +1.0 5.9 leucine-responsive regulatory protein compare
CCNA_03107 +1.0 6.4 cytidine deaminase compare
CCNA_00699 +1.0 3.5 LSU ribosomal protein L28P compare
CCNA_02729 +1.0 7.9 oligopeptide transporter compare
CCNA_02171 +1.0 7.1 nucleoside permease nupC compare
CCNA_03809 +1.0 4.6 organic solvent resistance transport system permease compare
CCNA_02297 +1.0 3.4 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_03108 +1.0 7.5 TonB-dependent outer membrane receptor compare
CCNA_03918 +1.0 1.6 hypothetical protein compare
CCNA_01851 +1.0 7.2 quinol cytochrome oxidase polypeptide II compare
CCNA_02687 +1.0 4.9 serine-pyruvate aminotransferase compare
CCNA_02225 +1.0 3.5 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_02841 +1.0 2.9 hypothetical protein compare
CCNA_03807 +1.0 6.3 organic solvent resistance transport system Ttg2D protein compare
CCNA_02617 +1.0 6.7 histidinol-phosphate aminotransferase compare
CCNA_02842 +1.0 5.9 two-component sensor histidine kinase compare
CCNA_01849 +0.9 5.8 quinol cytochrome oxidase polypeptide III compare
CCNA_02339 +0.9 6.4 methyltransferase compare
CCNA_00846 +0.9 8.3 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_03740 +0.9 5.2 cysteine synthase compare
CCNA_03604 +0.9 4.1 hypothetical protein compare
CCNA_00747 +0.9 5.1 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF compare
CCNA_01933 +0.9 4.2 hypothetical protein compare
CCNA_03062 +0.9 6.7 cell wall hydrolase family protein compare
CCNA_02406 +0.9 6.0 membrane lipoprotein compare
CCNA_03043 +0.9 3.5 type IV pilin protein pilA compare
CCNA_00137 +0.9 5.4 hybrid two-component histidine kinase/receiver protein ShkA compare
CCNA_00956 +0.9 6.7 flagellar biosynthesis protein FlhA compare
CCNA_02133 +0.9 3.3 glucokinase compare
CCNA_01181 +0.9 4.9 hypothetical protein compare
CCNA_01405 +0.9 3.4 GIY-YIG domain protein compare
CCNA_02338 +0.9 5.1 hypothetical protein compare
CCNA_01752 +0.9 5.2 YicC-family protein compare
CCNA_01003 +0.9 4.3 flagellar biosynthesis protein FliO compare
CCNA_01173 +0.9 6.7 chorismate mutase compare
CCNA_02273 +0.9 3.4 glutathione peroxidase compare
CCNA_03762 +0.9 2.2 acetolactate synthase-related protein compare
CCNA_02036 +0.9 2.6 DNA-binding protein HU compare
CCNA_02000 +0.9 1.3 SSU ribosomal protein S2P compare
CCNA_02805 +0.9 4.0 hypothetical protein compare
CCNA_02139 +0.9 3.7 polar flagellum positioning protein pflI compare
CCNA_03893 +0.9 3.5 hypothetical protein compare
CCNA_01186 +0.9 5.0 hypothetical protein compare
CCNA_02980 +0.9 6.5 tryptophan 2,3-dioxygenase compare
CCNA_03989 +0.9 6.3 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_R0037 +0.9 3.1 tRNA-Glu compare
CCNA_00895 +0.9 3.5 hypothetical protein compare
CCNA_01691 +0.9 4.2 tRNA/rRNA methyltransferase compare
CCNA_01116 +0.9 6.0 histidine protein kinase DivJ compare
CCNA_01914 +0.9 6.4 16S rRNA m(2)G 1207 methyltransferase RsmC compare
CCNA_02845 +0.9 3.9 two-component response regulator compare
CCNA_02567 +0.9 6.4 sensory transduction histidine kinase pleC compare
CCNA_01584 +0.9 6.9 multimodular transpeptidase-transglycosylase PBP 1A compare
CCNA_02616 +0.9 5.5 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01690 +0.9 3.4 MAPEG family membrane protein compare
CCNA_02575 +0.9 4.2 hypothetical protein compare
CCNA_01678 +0.9 6.0 arginine N-succinyltransferase, beta chain compare
CCNA_03214 +0.8 5.1 hypothetical protein compare
CCNA_01850 +0.8 6.7 quinol cytochrome oxidase polypeptide I compare
CCNA_01415 +0.8 6.1 methyltransferase compare
CCNA_03287 +0.8 5.3 PadR-family transcriptional regulator compare
CCNA_01779 +0.8 2.6 hypothetical protein compare
CCNA_00765 +0.8 4.4 hypothetical protein compare
CCNA_01979 +0.8 4.3 LexA repressor compare
CCNA_02475 +0.8 6.2 transcriptional regulator vanR compare
CCNA_01505 +0.8 2.4 hypothetical protein compare
CCNA_02141 +0.8 4.0 flagellar fliL protein compare
CCNA_01130 +0.8 4.7 flagellar biosynthesis protein FliR compare
CCNA_03913 +0.8 1.1 hypothetical protein compare
CCNA_00107 +0.8 2.4 Trm112p-like protein compare
CCNA_03252 +0.8 4.9 CopY/TcrY-family transcriptional regulator compare
CCNA_02615 +0.8 5.3 homogentisate 1,2-dioxygenase compare
CCNA_00945 +0.8 5.0 chemotaxis protein MotD compare
CCNA_03123 +0.8 4.9 ArsR-family transcriptional regulator compare
CCNA_01168 +0.8 1.5 3-ketoacyl-CoA thiolase compare
CCNA_02467 +0.8 4.6 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_01680 +0.8 5.5 succinylarginine dihydrolase compare
CCNA_00305 +0.8 5.4 cobalt-zinc-cadmium resistance protein czcD compare
CCNA_03479 +0.8 4.5 MarR-family transcriptional regulator compare
CCNA_01361 +0.8 1.9 PepSY superfamily protein compare
CCNA_00675 +0.8 4.1 VapC-like PIN domain ribonuclease compare
CCNA_00028 +0.8 2.1 TonB-dependent receptor compare
CCNA_01193 +0.8 6.0 amylosucrase compare
CCNA_01827 +0.8 4.3 cobyric acid synthase CobQ compare
CCNA_03838 +0.8 4.8 gluconate 2-dehydrogenase/glyoxylate reductase/hydroxypyruvate reductase compare
CCNA_01679 +0.8 4.6 succinylglutamic semialdehyde dehydrogenase compare
CCNA_02363 +0.8 3.9 hypothetical protein compare
CCNA_01949 +0.8 2.7 bactofilin A BacA compare
CCNA_03688 +0.8 4.1 AsnC-family transcriptional regulator compare
CCNA_03952 +0.8 3.6 hypothetical protein compare
CCNA_00790 +0.8 2.8 hypoxia negative feedback regulator FixT compare
CCNA_01771 +0.8 0.8 hypothetical protein compare
CCNA_02405 +0.8 4.9 ABC membrane transporter, periplasmic component compare
CCNA_02732 +0.8 3.8 hypothetical protein compare
CCNA_02698 +0.8 5.1 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_03849 +0.8 3.6 fructokinase compare
CCNA_03951 +0.8 3.3 hypothetical protein compare
CCNA_03325 +0.8 2.9 hypothetical protein compare
CCNA_01622 +0.8 2.8 Rsh ppGpp hydrolase-synthetase compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in carbon source experiments

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms