Experiment set1IT041 for Sinorhizobium meliloti 1021

Compare to:

LB with sodium fluoride 100 mM

200 most detrimental genes:

  gene name fitness t score description  
SMc00419 +1.6 9.2 glutathione synthetase compare
SMc01852 +1.4 9.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02901 +1.1 1.8 hypothetical protein compare
SMc02052 +1.0 1.6 hypothetical protein compare
SMc00169 +1.0 9.1 malic enzyme compare
SMc02095 +1.0 7.7 hypothetical protein compare
SMc02693 +1.0 2.5 peptidyl-tRNA hydrolase compare
SM_b20803 +1.0 4.3 3-deoxy-manno-octulosonate cytidylyltransferase compare
SMc01089 +1.0 2.1 hypothetical protein compare
SMc03069 +0.9 4.2 6-phosphogluconolactonase compare
SMc04453 +0.9 1.8 hypothetical protein compare
SM_b21192 +0.9 6.8 fructose-1,6-bisphosphate aldolase compare
SMc03008 +0.9 1.8 chemotaxis protein compare
SMc00802 +0.9 1.1 hypothetical protein compare
SMa2029 +0.9 2.7 amidohydrolase compare
SMc01568 +0.8 2.2 hypothetical protein compare
SM_b20806 +0.8 4.4 hypothetical protein compare
SMc02544 +0.8 1.2 hypothetical protein compare
SMa0314 +0.8 3.0 hypothetical protein compare
SMc02166 +0.8 5.5 dihydroorotase compare
SMc03111 +0.8 4.3 mannose 6-phosphate isomerase (EC 5.3.1.8) (from data) compare
SMc00937 +0.7 5.9 TRK system potassium uptake transmembrane protein compare
SMc01139 +0.7 3.2 RNA polymerase factor sigma-54 compare
SMa0674 +0.7 1.5 hypothetical protein compare
SMc00329 +0.7 3.5 iron response regulator protein compare
SMa0518 +0.7 1.6 hypothetical protein compare
SMc01041 +0.7 2.8 NIFR3-like protein compare
SMc00648 +0.7 2.8 hypothetical protein compare
SMa1170 +0.6 1.5 hypothetical protein compare
SMc03836 +0.6 0.8 acyl-CoA thioesterase i protein compare
SMc01153 +0.6 1.3 enoyl-CoA hydratase compare
SMc02245 +0.6 2.2 dihydroorotate dehydrogenase 2 compare
SM_b20611 +0.6 5.0 C4-dicarboxylate transporter DctA compare
SMc02232 +0.6 1.8 hypothetical protein compare
SMa1894 +0.6 1.5 methionine sulfoxide reductase B compare
SM_b20021 +0.6 1.0 transcriptional regulator compare
SMc00413 +0.6 3.0 hypothetical protein compare
SMc02246 +0.6 0.8 hypothetical protein compare
SM_b20805 +0.6 3.8 glycosyltransferase compare
SMc03060 +0.6 4.1 transcriptional regulator compare
SM_b20613 +0.6 3.8 C4-dicarboxylate transport transcriptional regulator compare
SM_b20387 +0.6 0.8 transcriptional regulator compare
SMc00806 +0.6 2.3 hypothetical protein compare
SMc02520 +0.6 3.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc02474 +0.6 1.8 ABC transporter ATP-binding protein compare
SMc02181 +0.6 4.4 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
SMc04233 +0.6 1.6 hypothetical protein compare
SM_b21512 +0.6 3.7 hypothetical protein compare
SM_b20725 +0.6 1.3 hypothetical protein compare
SMc04436 +0.6 1.7 hypothetical protein compare
SM_b21547 +0.6 3.4 hypothetical protein compare
SMc04456 +0.5 1.3 chaperone protein compare
SMc01132 +0.5 1.6 hypothetical protein compare
SMc00622 +0.5 2.5 ribonuclease D protein compare
SM_b20320 +0.5 0.8 TRAP-type large permease component compare
SMc02859 +0.5 1.8 hypothetical protein compare
SMc03996 +0.5 2.4 thiamine-phosphate pyrophosphorylase compare
SMc04092 +0.5 1.3 hypothetical protein compare
SMa0144 +0.5 0.8 hypothetical protein compare
SMa0412 +0.5 2.6 hypothetical protein compare
SMc04239 +0.5 1.8 hypothetical protein compare
SMa1697 +0.5 1.7 hypothetical protein compare
SMc01556 +0.5 1.2 hypothetical protein compare
SM_b21485 +0.5 1.8 hypothetical protein compare
SM_b20081 +0.5 2.1 hypothetical protein compare
SM_b20312 +0.5 3.0 dihydroxyacetone kinase compare
SMc04361 +0.5 2.1 hydantoin racemase compare
SMc04352 +0.5 2.8 signal peptide protein compare
SMc04182 +0.5 0.9 hypothetical protein compare
SMc04005 +0.5 2.7 pyruvate kinase compare
SMa5033 +0.5 0.8 hypothetical protein compare
SM_b21493 +0.5 1.9 AsnC family transcriptional regulator compare
SMc00187 +0.5 1.2 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc01232 +0.5 1.5 hypothetical protein compare
SMc02234 +0.5 1.0 hypothetical protein compare
SMc00280 +0.5 1.6 hypothetical protein compare
SMc02172 +0.5 2.6 transcriptional regulator compare
SMc00404 +0.5 0.7 hypothetical protein compare
SMa0312 +0.5 1.1 hypothetical protein compare
SMa0878 +0.5 1.8 glucosamine--fructose-6-phosphate aminotransferase compare
SMa0659 +0.5 1.1 cytochrome c binding protein, carboxyl terminus compare
SM_b20307 +0.5 0.6 dihydroxyacetone kinase compare
SMc01275 +0.5 2.4 ribosomal large subunit pseudouridine synthase C protein compare
SMa1943 +0.5 2.3 transcriptional regulator compare
SMa1132 +0.5 2.0 hypothetical protein compare
SMa1765 +0.5 1.0 hypothetical protein compare
SMa0211 +0.5 0.9 hypothetical protein compare
SMc01979 +0.5 2.5 sugar transport system permease ABC transporter protein compare
SMc00175 +0.5 2.1 ABC transporter ATP-binding protein compare
SMa1361 +0.4 1.5 hypothetical protein compare
SMc03780 +0.4 1.5 hypothetical protein compare
SM_b21441 +0.4 1.5 inosine-5'-monophosphate dehydrogenase compare
SMc00681 +0.4 2.4 leucine-responsive regulatory protein compare
SM_b21509 +0.4 0.8 plasmid stability protein compare
SM_b20540 +0.4 0.8 hypothetical protein compare
SMc02173 +0.4 1.6 hypothetical protein compare
SMa1073 +0.4 1.1 TRm23b IS ATP-binding protein compare
SMc01981 +0.4 2.5 cytochrome C transmembrane protein compare
SM_b20146 +0.4 2.3 pyridoxal phosphate biosynthetic protein compare
SMc03250 +0.4 1.4 hypothetical protein compare
SMc03837 +0.4 1.3 ABC transporter ATP-binding protein compare
SMa0645 +0.4 0.7 hypothetical protein compare
SMc02318 +0.4 1.4 hypothetical protein compare
SMc01858 +0.4 0.9 S-adenosyl-methyltransferase MraW compare
SMc05020 +0.4 1.1 entericidin A precursor compare
SM_b21028 +0.4 2.0 hypothetical protein compare
SMa1586 +0.4 2.0 SyrB2 regulator compare
SMa5027 +0.4 1.3 hypothetical protein compare
SMa1046 +0.4 2.0 adenylate cyclase compare
SMc04262 +0.4 2.2 6-phosphogluconate dehydrogenase compare
SMc00006 +0.4 1.0 hypothetical protein compare
SM_b20684 +0.4 3.6 hypothetical protein compare
SMc02719 +0.4 0.6 transposase compare
SMc04345 +0.4 1.6 hypothetical protein compare
SM_b20804 +0.4 2.4 hypothetical protein compare
SMc04866 +0.4 0.9 hypothetical protein compare
SMa0846 +0.4 0.7 transposase, fragment compare
SM_b20724 +0.4 2.0 hypothetical protein compare
SMc01929 +0.4 1.1 hypothetical protein compare
SMc02497 +0.4 0.9 hypothetical protein compare
SMa1188 +0.4 1.6 NosX accesory protein compare
SM_b20815 +0.4 2.3 outer membrane protein assembly protein compare
SMc01765 +0.4 0.8 hypothetical protein compare
SMa0872 +0.4 1.2 hypothetical protein compare
SMc01278 +0.4 1.7 chaperone-like protein compare
SMc04360 +0.4 2.1 hypothetical protein compare
SMc01770 +0.4 1.2 serine hydroxymethyltransferase compare
SMc04391 +0.4 0.9 3-ketoacyl-ACP reductase compare
SM_b20011 +0.4 1.4 hypothetical protein compare
SMa0998 +0.4 1.4 ISRm25b transposase compare
SMc02718 +0.4 1.3 hypothetical protein compare
SMc01280 +0.4 1.0 protease compare
SMc04357 +0.4 1.5 hypothetical protein compare
SMa2141 +0.4 1.2 formyltetrahydrofolate deformylase compare
SM_b21096 +0.4 0.7 amino acid transporter ABC transporter ATP-binding protein compare
SMc02822 +0.4 1.1 hypothetical protein compare
SMa5032 +0.4 1.4 hypothetical protein compare
SMa1445 +0.4 2.0 hypothetical protein compare
SMc02844 +0.4 0.4 transcriptional regulator compare
SMc02051 +0.4 0.8 hypothetical protein compare
SMc02231 +0.4 1.1 hypothetical protein compare
SMa2219 +0.4 2.1 decarboxylase compare
SM_b20913 +0.4 2.1 hypothetical protein compare
SM_b20348 +0.4 2.0 hypothetical protein compare
SMc00600 +0.4 1.8 molybdopterin MPT converting factor subunit 1 compare
SM_b20812 +0.4 3.3 hypothetical protein compare
SMc01410 +0.4 1.2 lipoprotein transmembrane compare
SMc00823 +0.4 1.1 hypothetical protein compare
SMc00763 +0.4 1.5 hypothetical protein compare
SMc02267 +0.4 2.3 hypothetical protein compare
SMc01826 +0.4 0.9 ABC transporter permease compare
SMc00565 +0.4 0.7 50S ribosomal protein L9 compare
SMa0734 +0.4 1.0 hypothetical protein compare
SMa1533 +0.4 1.7 NuoA2 NADH I chain A compare
SM_b20444 +0.4 1.1 hypothetical protein compare
SMa2299 +0.4 0.9 hypothetical protein compare
SMc02860 +0.4 0.8 hypothetical protein compare
SM_b20159 +0.4 2.4 inositol monophosphatase compare
SMc03776 +0.4 1.1 gamma-glutamyl kinase compare
SMc03843 +0.4 1.5 transcriptional regulator compare
SMa1594 +0.4 1.9 hypothetical protein compare
SM_b20210 +0.4 1.4 oxidoreductase compare
SMc03159 +0.4 1.1 ABC transporter ATP-binding protein compare
SMc04344 +0.4 0.7 signal peptide protein compare
SM_b21651 +0.4 1.8 plasmid stability protein compare
SM_b21406 +0.4 1.7 hypothetical protein compare
SMc03890 +0.4 1.7 transcriptional regulator compare
SM_b20752 +0.4 1.9 3-hydroxyisobutyryl-CoA hydrolase compare
SMc01519 +0.4 1.2 hypothetical protein compare
SMc02164 +0.4 1.2 fructokinase compare
SMa0964 +0.4 1.2 hypothetical protein compare
SMa1705 +0.4 1.8 MUCR family transcriptional regulatory protein IN SYRB 5'region compare
SM_b21164 +0.4 2.0 N-formylglutamate deformylase (EC 3.5.1.68) (from data) compare
SM_b20612 +0.4 2.2 C4-dicarboxylate transport sensor protein compare
SMc01724 +0.4 0.8 hypothetical protein compare
SMc04135 +0.4 1.7 periplasmic binding ABC transporter protein compare
SMc03072 +0.3 1.1 hypothetical protein compare
SMa1770 +0.3 0.7 hypothetical protein compare
SM_b21400 +0.3 0.9 hypothetical protein compare
SMa0765 +0.3 2.6 cbb3-type cytochrome c oxidase subunit I compare
SM_b21551 +0.3 0.6 hypothetical protein compare
SMc02250 +0.3 1.9 large-conductance mechanosensitive channel compare
SM_b21304 +0.3 1.0 NG,NG-dimethylarginine dimethylaminohydrolase (dimethylargininase) protein compare
SMc01049 +0.3 2.5 GTP-binding protein compare
SMc04428 +0.3 2.1 hypothetical protein compare
SMc01043 +0.3 2.2 nitrogen assimilation regulatory protein compare
SMc01034 +0.3 2.3 hypothetical protein compare
SMc00916 +0.3 1.4 glutathione S-transferase compare
SM_b21462 +0.3 1.7 sugar kinase compare
SM_b21031 +0.3 1.9 hypothetical protein compare
SMc00804 +0.3 0.4 hypothetical protein compare
SMc04225 +0.3 2.2 hypothetical protein compare
SMa0857 +0.3 1.1 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase compare
SMa1757 +0.3 1.1 Short chain compare
SMc02852 +0.3 1.9 hypothetical protein compare
SMc01713 +0.3 2.2 hypothetical protein compare
SMc02657 +0.3 1.6 hypothetical protein compare
SM_b20390 +0.3 1.4 hypothetical protein compare
SMc04343 +0.3 1.8 adenylate/guanylate cyclase transmembrane protein compare
SM_b20577 +0.3 1.3 protocatechuate 3,4-dioxygenase subunit beta compare


Specific Phenotypes

For 3 genes in this experiment

For stress sodium fluoride in Sinorhizobium meliloti 1021

For stress sodium fluoride across organisms