Experiment set1IT040 for Pseudomonas fluorescens FW300-N2E2

Compare to:

LB with Cisplatin 0.008 mg/ml

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_4888 -5.8 -25.8 Excinuclease ABC subunit A conserved
Pf6N2E2_2523 -5.7 -14.1 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) conserved
Pf6N2E2_3370 -5.6 -17.5 DNA repair protein RecN conserved
Pf6N2E2_2021 -5.5 -11.2 Excinuclease ABC subunit C conserved
Pf6N2E2_52 -5.4 -18.2 Excinuclease ABC subunit B conserved
Pf6N2E2_3137 -4.1 -12.9 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) conserved
Pf6N2E2_2942 -3.3 -12.9 ATP-dependent helicase DinG/Rad3 conserved
Pf6N2E2_5076 -2.7 -5.4 DNA repair protein RadA conserved
Pf6N2E2_1226 -2.6 -9.4 DNA damage response nuclease (from data) conserved
Pf6N2E2_1225 -2.5 -12.5 DinG family ATP-dependent helicase CPE1197 conserved
Pf6N2E2_5711 -2.4 -8.0 tRNA(Cytosine32)-2-thiocytidine synthetase conserved
Pf6N2E2_2645 -2.1 -5.3 ATP-dependent DNA helicase RecQ conserved
Pf6N2E2_2427 -1.7 -7.9 DNA damage response gene with a putative DNA binding domain and often regulated by LexA (PA0922-like) (from data) conserved
Pf6N2E2_5861 -1.5 -7.1 FIG00953885: hypothetical protein compare
Pf6N2E2_4474 -1.1 -7.3 FIG006231: RNA-binding protein compare
Pf6N2E2_5506 -1.1 -6.3 Exodeoxyribonuclease I (EC 3.1.11.1) conserved
Pf6N2E2_3030 +1.1 6.5 hypothetical protein compare
Pf6N2E2_3029 +1.8 8.6 Holin compare


Specific phenotypes for stress Cisplatin across organisms