Experiment set1IT040 for Burkholderia phytofirmans PsJN

Compare to:

LB with Polymyxin B sulfate 0.0625 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS01435 +1.2 11.0 LysR family transcriptional regulator compare
BPHYT_RS18835 +1.1 2.2 flagellar biosynthesis protein FliR compare
BPHYT_RS34745 +1.0 1.8 hypothetical protein compare
BPHYT_RS18825 +1.0 4.2 flagellar biosynthesis protein FliP compare
BPHYT_RS07480 +1.0 2.1 FAD-dependent oxidoreductase compare
BPHYT_RS07190 +1.0 2.6 acetyltransferase compare
BPHYT_RS05395 +0.9 1.7 hypothetical protein compare
BPHYT_RS10475 +0.9 1.8 mammalian cell entry protein compare
BPHYT_RS20025 +0.9 1.9 crotonase compare
BPHYT_RS01790 +0.9 8.2 LuxR family transcriptional regulator compare
BPHYT_RS01795 +0.8 5.5 histidine kinase compare
BPHYT_RS08595 +0.8 1.8 multidrug transporter compare
BPHYT_RS08340 +0.8 1.5 chemotaxis protein CheY compare
BPHYT_RS08715 +0.8 2.7 adenylyl-sulfate kinase compare
BPHYT_RS27655 +0.8 1.5 potassium transporter compare
BPHYT_RS32360 +0.8 2.0 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS12550 +0.8 1.3 GTP-binding protein HflX compare
BPHYT_RS25095 +0.8 2.1 AraC family transcriptional regulator compare
BPHYT_RS18780 +0.8 3.6 flagellar motor switch protein FliG compare
BPHYT_RS20515 +0.8 1.7 alpha/beta hydrolase compare
BPHYT_RS10040 +0.8 1.0 hypothetical protein compare
BPHYT_RS22815 +0.8 2.2 TonB-denpendent receptor compare
BPHYT_RS33805 +0.8 1.2 hypothetical protein compare
BPHYT_RS18775 +0.8 5.5 flagellar M-ring protein FliF compare
BPHYT_RS23270 +0.8 1.2 enoyl-CoA hydratase compare
BPHYT_RS10465 +0.8 1.7 hypothetical protein compare
BPHYT_RS21910 +0.8 2.6 ABC transporter permease compare
BPHYT_RS27410 +0.7 1.9 amidohydrolase compare
BPHYT_RS21805 +0.7 2.2 transcriptional regulator compare
BPHYT_RS21215 +0.7 3.4 Crp/Fnr family transcriptional regulator compare
BPHYT_RS14255 +0.7 6.2 ABC transporter compare
BPHYT_RS16505 +0.7 1.9 HAD family hydrolase compare
BPHYT_RS20185 +0.7 1.8 sugar transferase compare
BPHYT_RS18935 +0.7 5.4 flagellar biosynthesis regulator FlhF compare
BPHYT_RS19025 +0.7 5.0 transcriptional regulator compare
BPHYT_RS33535 +0.7 6.3 RNA polymerase sigma factor RpoD compare
BPHYT_RS31225 +0.7 2.9 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS35800 +0.7 2.7 TetR family transcriptional regulator compare
BPHYT_RS18940 +0.7 5.0 flagellar biosynthesis protein FlhA compare
BPHYT_RS29920 +0.7 0.9 hypothetical protein compare
BPHYT_RS35560 +0.7 1.7 endoribonuclease L-PSP compare
BPHYT_RS27145 +0.7 1.7 TetR family transcriptional regulator compare
BPHYT_RS10470 +0.7 1.9 hypothetical protein compare
BPHYT_RS35310 +0.7 1.1 GCN5 family N-acetyltransferase compare
BPHYT_RS24630 +0.7 2.1 (2Fe-2S)-binding protein compare
BPHYT_RS18890 +0.7 4.8 flagellar basal body rod protein FlgC compare
BPHYT_RS18785 +0.7 1.6 flagellar assembly protein FliH compare
BPHYT_RS07325 +0.7 1.0 GntR family transcriptional regulator compare
BPHYT_RS25970 +0.7 1.0 urea amidolyase compare
BPHYT_RS11970 +0.7 1.2 cupin compare
BPHYT_RS23475 +0.7 1.5 luciferase compare
BPHYT_RS10140 +0.6 2.3 ABC transporter substrate-binding protein compare
BPHYT_RS31305 +0.6 1.8 alcohol dehydrogenase compare
BPHYT_RS18865 +0.6 2.0 flagellar L-ring protein FlgH compare
BPHYT_RS09565 +0.6 0.9 acetyl-CoA acetyltransferase compare
BPHYT_RS10980 +0.6 1.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BPHYT_RS18805 +0.6 4.3 flagellar basal body protein FliL compare
BPHYT_RS02765 +0.6 2.0 cytochrome BD oxidase subunit I compare
BPHYT_RS09895 +0.6 1.1 LysR family transcriptional regulator compare
BPHYT_RS15455 +0.6 3.6 hypothetical protein compare
BPHYT_RS18945 +0.6 4.5 flagellar biosynthesis protein FlhB compare
BPHYT_RS14250 +0.6 3.8 glycosyl transferase compare
BPHYT_RS26285 +0.6 2.2 glycogen debranching protein compare
BPHYT_RS28065 +0.6 1.0 hypothetical protein compare
BPHYT_RS13200 +0.6 1.2 molybdopterin binding oxidoreductase compare
BPHYT_RS23760 +0.6 2.4 phosphonate ABC transporter permease compare
BPHYT_RS24565 +0.6 1.6 membrane protein compare
BPHYT_RS05970 +0.6 3.4 glyoxalase compare
BPHYT_RS18855 +0.6 3.2 flagellar rod assembly protein FlgJ compare
BPHYT_RS29540 +0.6 1.2 aldolase compare
BPHYT_RS30745 +0.6 2.0 hypothetical protein compare
BPHYT_RS00145 +0.6 2.4 hypothetical protein compare
BPHYT_RS28025 +0.6 0.7 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS25065 +0.6 1.1 glycine/betaine ABC transporter ATPase compare
BPHYT_RS09440 +0.6 2.0 glycerate kinase compare
BPHYT_RS13170 +0.6 1.4 ATPase compare
BPHYT_RS18880 +0.6 4.2 flagellar hook protein FlgE compare
BPHYT_RS05320 +0.6 1.1 beta-lactamase compare
BPHYT_RS33610 +0.6 1.0 DNA polymerase I compare
BPHYT_RS18830 +0.6 4.1 flagellar biosynthesis protein FliQ compare
BPHYT_RS31970 +0.6 1.5 cupin compare
BPHYT_RS16335 +0.6 0.9 membrane protein compare
BPHYT_RS29330 +0.6 1.9 acetyltransferase compare
BPHYT_RS25000 +0.6 1.6 MFS transporter compare
BPHYT_RS26010 +0.5 1.5 ABC transporter substrate-binding protein compare
BPHYT_RS12265 +0.5 1.3 alanine acetyltransferase compare
BPHYT_RS22145 +0.5 1.0 phosphoesterase compare
BPHYT_RS13420 +0.5 2.2 hypothetical protein compare
BPHYT_RS26870 +0.5 2.8 cytochrome C551 compare
BPHYT_RS26720 +0.5 2.7 metallophosphatase compare
BPHYT_RS33880 +0.5 2.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS26910 +0.5 1.1 hypothetical protein compare
BPHYT_RS18860 +0.5 2.2 flagellar P-ring protein FlgI compare
BPHYT_RS23705 +0.5 4.0 hypothetical protein compare
BPHYT_RS30720 +0.5 1.7 hypothetical protein compare
BPHYT_RS21770 +0.5 1.5 aldehyde dehydrogenase compare
BPHYT_RS34085 +0.5 1.5 polyamine ABC transporter permease compare
BPHYT_RS26955 +0.5 0.8 succinylglutamate desuccinylase compare
BPHYT_RS10555 +0.5 2.6 integral membrane sensor hybrid histidine kinase compare
BPHYT_RS36320 +0.5 1.4 type IV secretion system family protein compare
BPHYT_RS12535 +0.5 0.7 membrane protein compare
BPHYT_RS10995 +0.5 1.4 GntR family transcriptional regulator compare
BPHYT_RS11170 +0.5 1.0 hypothetical protein compare
BPHYT_RS10540 +0.5 1.0 secretion protein compare
BPHYT_RS20630 +0.5 0.9 patatin compare
BPHYT_RS32880 +0.5 0.7 alanine acetyltransferase compare
BPHYT_RS28285 +0.5 1.4 MFS transporter compare
BPHYT_RS06485 +0.5 1.6 globin compare
BPHYT_RS04740 +0.5 3.0 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS26740 +0.5 1.1 hypothetical protein compare
BPHYT_RS26925 +0.5 1.0 NIPSNAP family containing protein compare
BPHYT_RS27060 +0.5 0.8 photosystem reaction center subunit H compare
BPHYT_RS18810 +0.5 3.2 flagellar motor switch protein FliM compare
BPHYT_RS18795 +0.5 3.1 flagellar export protein FliJ compare
BPHYT_RS09040 +0.5 1.7 MerR family transcriptional regulator compare
BPHYT_RS11805 +0.5 0.7 hypothetical protein compare
BPHYT_RS02770 +0.5 2.5 membrane protein compare
BPHYT_RS16195 +0.5 2.1 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS32595 +0.5 1.9 hypothetical protein compare
BPHYT_RS30855 +0.5 1.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS11895 +0.5 2.2 peroxiredoxin compare
BPHYT_RS18985 +0.5 2.1 hypothetical protein compare
BPHYT_RS08000 +0.5 1.1 antibiotic biosynthesis monooxygenase compare
BPHYT_RS31030 +0.5 1.8 tyrosine protein kinase compare
BPHYT_RS15800 +0.5 1.8 GntR family transcriptional regulator compare
BPHYT_RS07930 +0.5 1.6 hypothetical protein compare
BPHYT_RS03380 +0.5 2.4 NAD(P) transhydrogenase subunit beta compare
BPHYT_RS07595 +0.5 1.1 membrane protein compare
BPHYT_RS07960 +0.5 0.8 hypothetical protein compare
BPHYT_RS18790 +0.5 2.8 ATP synthase compare
BPHYT_RS07110 +0.5 1.4 LysR family transcriptional regulator compare
BPHYT_RS20165 +0.5 1.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BPHYT_RS12440 +0.5 1.8 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS30210 +0.5 1.7 GCN5 family acetyltransferase compare
BPHYT_RS06305 +0.5 1.8 small mechanosensitive ion channel protein MscS compare
BPHYT_RS28850 +0.5 2.0 hypothetical protein compare
BPHYT_RS27370 +0.5 1.1 CoA transferase compare
BPHYT_RS11600 +0.5 1.8 biotin synthase compare
BPHYT_RS13160 +0.5 0.9 membrane protein compare
BPHYT_RS31290 +0.5 1.2 histidine kinase compare
BPHYT_RS17800 +0.5 2.1 hypothetical protein compare
BPHYT_RS01455 +0.5 0.6 peptide deformylase compare
BPHYT_RS05095 +0.5 1.9 hydroxymethylpyrimidine transporter compare
BPHYT_RS10760 +0.5 1.6 major facilitator transporter compare
BPHYT_RS24275 +0.5 1.7 alpha-ketoglutarate decarboxylase compare
BPHYT_RS02755 +0.5 1.1 cyd operon protein YbgT compare
BPHYT_RS35245 +0.5 1.0 hypothetical protein compare
BPHYT_RS17675 +0.5 1.6 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS10695 +0.5 1.0 aromatic-ring-hydroxylating dioxygenase subunit beta compare
BPHYT_RS11220 +0.5 2.8 LacI family transcriptional regulator compare
BPHYT_RS22870 +0.5 1.3 copper transporter compare
BPHYT_RS33400 +0.5 1.7 magnesium transporter CorA compare
BPHYT_RS03110 +0.5 0.9 MarR family transcriptional regulator compare
BPHYT_RS26435 +0.5 1.0 hypothetical protein compare
BPHYT_RS20940 +0.5 1.4 citrate synthase compare
BPHYT_RS19020 +0.4 2.9 transcriptional regulator compare
BPHYT_RS35655 +0.4 1.2 hypothetical protein compare
BPHYT_RS02760 +0.4 1.8 cytochrome BD oxidase subunit II compare
BPHYT_RS31715 +0.4 0.9 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS15035 +0.4 1.3 hypothetical protein compare
BPHYT_RS29870 +0.4 1.1 2-dehydropantoate 2-reductase compare
BPHYT_RS28600 +0.4 1.1 ArsC family transcriptional regulator compare
BPHYT_RS00955 +0.4 1.6 DNA polymerase compare
BPHYT_RS27920 +0.4 0.8 tricarballylate utilization protein B compare
BPHYT_RS25450 +0.4 0.7 membrane protein compare
BPHYT_RS26280 +0.4 0.8 hypothetical protein compare
BPHYT_RS33050 +0.4 2.2 LuxR family transcriptional regulator compare
BPHYT_RS05525 +0.4 1.3 sensor histidine kinase compare
BPHYT_RS19785 +0.4 1.1 chemotaxis protein CheY compare
BPHYT_RS23030 +0.4 0.7 gluconate 2-dehydrogenase compare
BPHYT_RS13505 +0.4 2.4 2,4-dienoyl-CoA reductase compare
BPHYT_RS22635 +0.4 1.4 dihydrodipicolinate synthase compare
BPHYT_RS35230 +0.4 0.6 type 11 methyltransferase compare
BPHYT_RS06490 +0.4 1.6 membrane protein compare
BPHYT_RS33540 +0.4 2.0 hypothetical protein compare
BPHYT_RS03900 +0.4 0.6 phospholipid-binding protein compare
BPHYT_RS31345 +0.4 1.3 malonate transporter compare
BPHYT_RS10440 +0.4 1.8 GntR family transcriptional regulator compare
BPHYT_RS27560 +0.4 0.6 histidine kinase compare
BPHYT_RS23155 +0.4 0.7 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS31150 +0.4 1.2 transcriptional regulator compare
BPHYT_RS15165 +0.4 1.9 histidine ammonia-lyase compare
BPHYT_RS18870 +0.4 3.1 flagellar basal body rod protein FlgG compare
BPHYT_RS08130 +0.4 0.6 transposase compare
BPHYT_RS31540 +0.4 1.8 chloride channel protein compare
BPHYT_RS18740 +0.4 1.9 acyl-CoA dehydrogenase compare
BPHYT_RS02070 +0.4 0.9 hypothetical protein compare
BPHYT_RS30825 +0.4 0.9 extradiol dioxygenase compare
BPHYT_RS05420 +0.4 1.2 glutathione S-transferase compare
BPHYT_RS04105 +0.4 1.8 glyoxalase compare
BPHYT_RS23265 +0.4 1.9 methylcrotonoyl-CoA carboxylase compare
BPHYT_RS26415 +0.4 0.7 glutathione S-transferase compare
BPHYT_RS09870 +0.4 1.4 membrane protein compare
BPHYT_RS28880 +0.4 1.0 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
BPHYT_RS30675 +0.4 2.4 LysR family transcriptional regulator compare
BPHYT_RS16020 +0.4 1.0 AsnC family transcriptional regulator compare
BPHYT_RS29485 +0.4 0.8 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS22640 +0.4 1.7 hydroxyproline-2-epimerase compare
BPHYT_RS32400 +0.4 1.0 TetR family transcriptional regulator compare
BPHYT_RS29605 +0.4 0.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Polymyxin B sulfate in Burkholderia phytofirmans PsJN

For stress Polymyxin B sulfate across organisms