Experiment set1IT039 for Sinorhizobium meliloti 1021

Compare to:

LB with Cobalt chloride hexahydrate 0.16 mM

200 most important genes:

  gene name fitness t score description  
SMc02144 -5.7 -6.8 phosphate ABC transporter permease compare
SMc01881 -4.8 -5.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02147 -4.3 -10.0 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02909 -4.3 -2.9 transglycosylase transmembrane protein compare
SMc02115 -4.1 -1.4 hypothetical protein compare
SMc01880 -4.0 -3.9 pantoate--beta-alanine ligase compare
SMc02833 -3.9 -3.1 penicillin-insensitive murein endopeptidase compare
SMc02142 -3.9 -7.9 phosphate transporter ATP-binding protein compare
SMc00914 -3.7 -6.8 oxidoreductase compare
SMc02140 -3.6 -2.5 phosphate regulon transcriptional regulatory protein compare
SMc02435 -3.3 -3.8 methyltransferase compare
SMc02850 -3.3 -3.4 DNA polymerase I compare
SMc00353 -3.2 -3.1 transmembrane protein compare
SMc03978 -3.2 -4.3 transketolase compare
SMc02232 -3.1 -3.9 hypothetical protein compare
SMc02102 -2.8 -5.1 hypothetical protein compare
SMc00334 -2.8 -2.5 cytidylate kinase compare
SMc03763 -2.8 -4.6 cytosine-specific methyltransferase compare
SMc02145 -2.8 -1.4 signal peptide protein compare
SMc00067 -2.8 -11.0 outer-membranne lipoprotein compare
SMc03229 -2.8 -2.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02484 -2.7 -9.8 amino acid efflux transmembrane protein compare
SMc02077 -2.7 -3.2 exodeoxyribonuclease III protein compare
SMc04296 -2.6 -1.8 cell division protein FtsZ compare
SMc02582 -2.6 -4.4 hypothetical protein compare
SMc02867 -2.6 -4.3 multidrug-efflux system transmembrane protein compare
SMc00619 -2.4 -2.7 hypothetical protein compare
SMa0789 -2.4 -5.0 GntR family transcriptional regulator compare
SMc02143 -2.3 -3.9 phosphate ABC transporter permease compare
SMc01208 -2.2 -2.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00511 -2.2 -6.8 D-ribulose-5-phosphate 3-epimerase compare
SMc02234 -2.2 -3.3 hypothetical protein compare
SMc01147 -2.2 -4.0 coproporphyrinogen III oxidase compare
SMc02520 -2.1 -7.1 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc03100 -2.1 -2.2 hypothetical protein compare
SMc02510 -2.1 -1.0 ferric uptake regulation protein compare
SMc01438 -2.1 -6.2 protease precursor signal peptide protein compare
SMc02363 -2.1 -3.4 cytochrome C-type biogenesis transmembrane protein compare
SMc03967 -2.1 -1.5 Holliday junction resolvase compare
SMc00760 -2.0 -3.9 recombinase A compare
SMc02114 -2.0 -5.1 hypothetical protein compare
SMc00815 -2.0 -1.2 inosine 5'-monophosphate dehydrogenase compare
SMc02071 -1.9 -5.3 hydrolase glycosidase compare
SMc02451 -1.9 -2.2 hypothetical protein compare
SMc01361 -1.9 -4.3 dihydroorotase compare
SMc02641 -1.9 -4.0 UDP-glucose 6-dehydrogenase compare
SMc03993 -1.8 -3.7 hypothetical protein compare
SM_b20758 -1.7 -3.2 ArsR family transcriptional regulator compare
SMc01342 -1.7 -5.5 hypothetical protein compare
SMc03849 -1.7 -1.4 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc00579 -1.7 -4.7 dimethyladenosine transferase compare
SMc00987 -1.6 -3.0 hypothetical protein compare
SMc02856 -1.6 -8.6 penicillin-binding protein compare
SMc02495 -1.6 -1.7 translaldolase compare
SMc01360 -1.6 -3.7 aspartate carbamoyltransferase catalytic subunit compare
SMc02894 -1.6 -2.1 hypothetical protein compare
SMc02683 -1.6 -1.8 hypothetical protein compare
SMc00194 -1.6 -3.6 hypothetical protein compare
SMc01877 -1.6 -4.4 DNA repair protein compare
SMc04024 -1.6 -4.2 membrane-bound lytic murein transglycosylase compare
SMc03836 -1.5 -1.6 acyl-CoA thioesterase i protein compare
SMc04391 -1.5 -1.7 3-ketoacyl-ACP reductase compare
SMc03140 -1.5 -4.2 transcriptional regulator compare
SMc01461 -1.5 -5.0 DNA helicase II protein compare
SMc04121 -1.5 -1.8 uracil phosphoribosyltransferase compare
SMc04330 -1.5 -2.6 trimethylamine methyltransferase compare
SMc01929 -1.5 -3.2 hypothetical protein compare
SMc02543 -1.5 -4.0 hypothetical protein compare
SMc02753 -1.5 -1.5 PTS system transporter subunit IIA compare
SMc00691 -1.4 -3.8 site-specific tyrosine recombinase XerD compare
SMc02868 -1.4 -3.3 multidrug efflux system protein compare
SMc02362 -1.4 -2.4 cytochrome c-type biogenesis protein CcmE compare
SMc00602 -1.4 -5.9 excinuclease ABC subunit C compare
SMc00876 -1.4 -4.8 ATP-binding MRP protein compare
SMc02141 -1.4 -1.6 phosphate transporter PhoU compare
SMc00963 -1.4 -4.1 hypothetical protein compare
SMc03242 -1.4 -3.0 GTP-binding protein compare
SMc02052 -1.4 -0.9 hypothetical protein compare
SMc02434 -1.4 -2.0 hypothetical protein compare
SMc00025 -1.4 -6.6 pyruvate phosphate dikinase compare
SMc01845 -1.4 -2.3 transglycosylase transmembrane protein compare
SMc01187 -1.3 -2.2 rare lipoprotein A compare
SM_b21524 -1.3 -3.0 septum formation inhibitor compare
SM_b20450 -1.3 -8.5 regulatory protein compare
SMc02576 -1.3 -1.8 acetyltransferase compare
SMc02827 -1.3 -2.3 hypothetical protein compare
SMc00556 -1.3 -4.7 DNA repair protein RadA compare
SMc03091 -1.3 -4.5 arginase compare
SMc03180 -1.3 -4.2 monovalent cation/H+ antiporter subunit C compare
SMc00088 -1.3 -1.5 hypothetical protein compare
SMc00513 -1.3 -5.2 amino acid-binding periplasmic protein compare
SMc02758 -1.2 -3.7 nucleotidyl transferase compare
SMc03839 -1.2 -1.6 hypothetical protein compare
SMc02149 -1.2 -1.9 hypothetical protein compare
SMc02861 -1.2 -1.1 phosphate transporter compare
SMc00982 -1.2 -5.0 dioxygenase compare
SMc03773 -1.2 -3.9 hypothetical protein compare
SMc02485 -1.2 -1.1 signal peptide protein compare
SMc01220 -1.2 -4.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc03184 -1.2 -1.2 PH adaptation potassium efflux system G transmembrane protein compare
SMc02121 -1.2 -1.6 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc01454 -1.2 -7.0 hypothetical protein compare
SMc02685 -1.1 -2.1 hypothetical protein compare
SMc00981 -1.1 -3.8 ferredoxin protein compare
SMc00492 -1.1 -0.9 hypothetical protein compare
SMc02718 -1.1 -1.7 hypothetical protein compare
SMc01716 -1.1 -5.9 sensor histidine kinase transmembrane protein compare
SMc01347 -1.1 -2.2 hypothetical protein compare
SMc01146 -1.1 -1.6 deoxyribonucleotide triphosphate pyrophosphatase compare
SMa1595 -1.1 -3.0 hypothetical protein compare
SMc00970 -1.1 -1.7 exodeoxyribonuclease VII small subunit compare
SMc02713 -1.0 -1.7 RNA polymerase sigma-E factor (sigma-24) protein compare
SMa0905 -1.0 -1.3 hypothetical protein compare
SMc00053 -1.0 -0.8 monovalent cation/H+ antiporter subunit C compare
SMc02385 -1.0 -1.9 hypothetical protein compare
SMc03746 -1.0 -1.5 hypothetical protein compare
SMc00103 -1.0 -3.1 alpha-halocarboxylic acid dehalogenase compare
SMc01183 -1.0 -1.4 LexA repressor compare
SMc00331 -1.0 -2.1 hypothetical protein compare
SMc03923 -1.0 -6.0 glucose-1-phosphate adenylyltransferase compare
SM_b21523 -1.0 -1.7 cell division inhibitor protein compare
SMc00060 -1.0 -4.1 hypothetical protein compare
SMa2215 -1.0 -2.5 GntR family transcriptional regulator compare
SM_b20998 -1.0 -5.5 hypothetical protein compare
SMc01260 -0.9 -2.9 transcriptional regulator compare
SMc00228 -0.9 -5.3 ATP-dependent DNA helicase RecG compare
SMc03924 -0.9 -5.2 glycogen synthase compare
SMc03135 -0.9 -1.5 amino-acid transport system ATP-binding ABC transporter protein compare
SMc00859 -0.9 -1.9 hypothetical protein compare
SMa0144 -0.9 -0.8 hypothetical protein compare
SMc03179 -0.9 -6.5 monovalent cation/H+ antiporter subunit A compare
SMc03181 -0.9 -4.2 monovalent cation/H+ antiporter subunit D compare
SMa0087 -0.9 -1.3 hypothetical protein compare
SMc00038 -0.9 -2.0 hypothetical protein compare
SMc01578 -0.9 -6.2 aspartate aminotransferase compare
SMc01235 -0.9 -5.6 excinuclease ABC subunit A compare
SMc03981 -0.9 -3.3 phosphoglycerate kinase compare
SMc00555 -0.9 -0.9 colicin V production transmembrane protein compare
SMc00013 -0.9 -1.4 cytochrome C oxidase subunit III transmembrane protein compare
SMc00650 -0.9 -1.0 hypothetical protein compare
SMc01472 -0.8 -0.8 50S ribosomal protein L11 methyltransferase compare
SMc03878 -0.8 -2.5 acetoacetyl-CoA reductase compare
SMc01261 -0.8 -3.6 transporter transmembrane protein compare
SMc00726 -0.8 -0.6 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01700 -0.8 -3.4 peptidyl-prolyl cis-trans isomerase A compare
SMc03183 -0.8 -3.1 monovalent cation/H+ antiporter subunit F compare
SM_b20293 -0.8 -1.0 hypothetical protein compare
SM_b20773 -0.8 -3.4 GntR family transcriptional regulator compare
SM_b20876 -0.8 -3.1 hypothetical protein compare
SMc04169 -0.8 -5.1 transcriptional regulator compare
SMc02780 -0.8 -2.9 succinate-semialdehyde dehydrogenase [NADP+] protein compare
SMc00296 -0.8 -5.0 POLY3-hydroxybutyrate polymerase compare
SMc01374 -0.8 -3.1 hypothetical protein compare
SMc01939 -0.8 -0.8 urease subunit beta compare
SMc02901 -0.8 -0.6 hypothetical protein compare
SMc00166 -0.8 -1.3 oxidoreductase NAD protein compare
SMc00456 -0.8 -3.9 hypothetical protein compare
SM_b20226 -0.8 -0.8 hypothetical protein compare
SMc00072 -0.8 -1.1 peroxiredoxin protein compare
SMa1564 -0.8 -3.3 Pilus assembly protein compare
SMc00557 -0.8 -2.9 alanine racemase compare
SMc01365 -0.8 -5.6 exoribonuclease II protein compare
SMc01200 -0.8 -4.2 hypothetical protein compare
SMc04260 -0.8 -4.1 transcriptional regulator compare
SMc02068 -0.8 -4.4 ABC transporter ATP-binding protein compare
SM_b21480 -0.8 -0.9 hypothetical protein compare
SMc01660 -0.8 -1.4 hypothetical protein compare
SMc01216 -0.8 -3.1 hypothetical protein compare
SMc02172 -0.7 -4.0 transcriptional regulator compare
SMc00073 -0.7 -1.1 hypothetical protein compare
SM_b21695 -0.7 -2.4 hypothetical protein compare
SMc02978 -0.7 -3.0 hypothetical protein compare
SMc04866 -0.7 -1.8 hypothetical protein compare
SMc04405 -0.7 -2.9 3-isopropylmalate dehydrogenase compare
SMc01853 -0.7 -1.2 hypothetical protein compare
SM_b20452 -0.7 -1.5 hypothetical protein compare
SM_b21175 -0.7 -2.0 phosphate uptake ABC transporter permease compare
SMc01221 -0.7 -3.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc04311 -0.7 -3.5 hypothetical protein compare
SMc01857 -0.7 -2.3 cell division protein MraZ compare
SM_b21119 -0.7 -3.0 gluconokinase compare
SMc00559 -0.7 -2.2 hypothetical protein compare
SMc01457 -0.7 -3.9 transport transmembrane protein compare
SMa0112 -0.7 -1.5 hypothetical protein compare
SM_b21330 -0.7 -2.0 hypothetical protein compare
SMc00378 -0.7 -1.8 exodeoxyribonuclease VII large subunit compare
SMc01012 -0.7 -1.0 hypothetical protein compare
SMc03051 -0.7 -2.4 flagellar biosynthesis repressor FlbT compare
SMc03227 -0.7 -2.1 hypothetical protein compare
SMc01368 -0.7 -2.6 transport transmembrane protein compare
SMc03228 -0.7 -2.1 YciI-like protein compare
SM_b20595 -0.7 -2.3 cell division protein FtsK compare
SMc02853 -0.7 -2.9 hypothetical protein compare
SMc04203 -0.7 -2.4 RNA polymerase sigma factor FECI protein compare
SMa2168 -0.7 -1.0 tRNA-Met compare
SM_b20509 -0.7 -1.5 transcriptional regulator compare
SMc02373 -0.7 -0.9 hypothetical protein compare
SMc04329 -0.7 -2.4 hypothetical protein compare
SMc02826 -0.7 -2.0 transcriptional regulator compare
SMc01259 -0.7 -1.3 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For stress Cobalt chloride hexahydrate in Sinorhizobium meliloti 1021

For stress Cobalt chloride hexahydrate across organisms