Experiment set1IT039 for Sinorhizobium meliloti 1021

Compare to:

LB with Cobalt chloride hexahydrate 0.16 mM

Group: stress
Media: LB + Cobalt chloride hexahydrate (0.16 mM)
Culturing: Smeli_ML6, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=750 rpm
Growth: about 4.3 generations
By: Mark on 6/2/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: Smeli_SP2 A5

Specific Phenotypes

For 10 genes in this experiment

For stress Cobalt chloride hexahydrate in Sinorhizobium meliloti 1021

For stress Cobalt chloride hexahydrate across organisms

SEED Subsystems

Subsystem #Specific
Cobalt-zinc-cadmium resistance 1
Lacto-N-Biose I and Galacto-N-Biose Metabolic Pathway 1
Lactose and Galactose Uptake and Utilization 1
N-linked Glycosylation in Bacteria 1
Rhamnose containing glycans 1
linker unit-arabinogalactan synthesis 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
sulfoquinovosyl diacylglycerol biosynthesis 2 2 2
UDP-N-acetyl-D-galactosamine biosynthesis I 1 1 1
UDP-α-D-galactose biosynthesis 1 1 1
glycogen biosynthesis II (from UDP-D-Glucose) 4 3 2
UDP-α-D-galactofuranose biosynthesis 2 1 1
D-galactose detoxification 3 1 1
D-galactose degradation I (Leloir pathway) 5 3 1
lipid IVA biosynthesis (generic) 6 6 1
lipid IVA biosynthesis (H. pylori) 6 6 1
lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing) 6 6 1
lipid IVA biosynthesis (E. coli) 6 6 1
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor) 6 6 1
lipid IVA biosynthesis (P. putida) 6 6 1
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis 6 4 1
UDP-N-acetyl-D-galactosamine biosynthesis II 7 5 1
stachyose degradation 7 4 1
lipid IVA biosynthesis (P. gingivalis) 9 9 1
UDP-sugars interconversion 9 4 1
teichuronic acid biosynthesis (B. subtilis 168) 9 2 1
colanic acid building blocks biosynthesis 11 6 1
superpathway of (Kdo)2-lipid A biosynthesis 17 11 1
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 18 1 1
superpathway of Kdo2-lipid A biosynthesis 25 11 1
superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 33 12 1