Experiment set1IT037 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Phloretin 250 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.5 -3.1 SirA-like protein compare
Psyr_0951 -4.3 -4.1 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1404 -4.2 -11.4 Ferritin and Dps compare
Psyr_4740 -3.8 -7.1 thiazole-phosphate synthase compare
Psyr_4009 -3.7 -9.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1613 -3.5 -4.7 septum site-determining protein MinC compare
Psyr_4340 -3.4 -7.6 phosphomethylpyrimidine kinase, putative compare
Psyr_0202 -3.3 -11.5 transcriptional regulator, LysR family compare
Psyr_5132 -3.0 -3.5 Glucose-inhibited division protein A subfamily compare
Psyr_4686 -2.9 -5.7 8-amino-7-oxononanoate synthase compare
Psyr_4341 -2.9 -7.6 thiamine-phosphate diphosphorylase compare
Psyr_4683 -2.8 -5.0 dethiobiotin synthase compare
Psyr_4684 -2.7 -3.6 biotin synthesis protein BioC compare
Psyr_1408 -2.5 -3.6 Holliday junction endonuclease RuvC compare
Psyr_2823 -2.4 -3.1 hypothetical protein compare
Psyr_0454 -2.4 -4.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1907 -2.4 -4.3 GTP cyclohydrolase I compare
Psyr_4687 -2.2 -6.5 biotin synthase compare
Psyr_0917 -2.2 -9.3 ABC-2 compare
Psyr_4091 -2.1 -4.7 8-oxo-dGTPase compare
Psyr_0918 -1.9 -10.8 ABC transporter compare
Psyr_0215 -1.9 -10.3 Exodeoxyribonuclease III xth compare
Psyr_4136 -1.9 -2.9 BolA-like protein compare
Psyr_0255 -1.8 -2.6 glutamate-cysteine ligase compare
Psyr_0565 -1.8 -6.0 Protein of unknown function UPF0126 compare
Psyr_2854 -1.8 -6.1 conserved hypothetical protein compare
Psyr_1410 -1.7 -4.9 Holliday junction DNA helicase RuvB compare
Psyr_0487 -1.7 -3.1 glutathione synthase compare
Psyr_3581 -1.6 -5.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_4991 -1.6 -2.3 hypothetical protein compare
Psyr_4015 -1.6 -2.0 conserved domain protein compare
Psyr_3673 -1.6 -2.6 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_4581 -1.6 -3.4 anthranilate synthase, component II compare
Psyr_3008 -1.6 -5.3 Undecaprenyl-diphosphatase compare
Psyr_4008 -1.5 -11.6 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_0826 -1.5 -5.8 glucose-6-phosphate isomerase compare
Psyr_4203 -1.5 -2.1 SsrA-binding protein compare
Psyr_0549 -1.5 -2.6 Metallophosphoesterase compare
Psyr_2855 -1.5 -3.8 methionine synthase (B12-independent) compare
Psyr_0571 -1.5 -3.5 tRNA isopentenyltransferase compare
Psyr_3808 -1.4 -2.2 hypothetical protein compare
Psyr_0259 -1.3 -3.4 Osmolarity sensor protein envZ compare
Psyr_0574 -1.3 -4.3 protease FtsH subunit HflK compare
Psyr_0954 -1.3 -3.0 Protein of unknown function UPF0153 compare
Psyr_4007 -1.3 -7.3 Secretion protein HlyD compare
Psyr_3427 -1.3 -2.2 conserved hypothetical protein compare
Psyr_1930 -1.3 -3.0 hypothetical protein compare
Psyr_4019 -1.2 -3.7 H-NS family protein MvaT compare
Psyr_1555 -1.2 -3.9 Cobyrinic acid a,c-diamide synthase compare
Psyr_1667 -1.2 -4.5 Colicin V production protein compare
Psyr_2980 -1.2 -3.0 UDP-glucose pyrophosphorylase compare
Psyr_3947 -1.2 -1.8 Methyltransferase, putative compare
Psyr_1588 -1.1 -2.8 Putative exonuclease, RdgC compare
Psyr_0531 -1.1 -1.7 LmbE-like protein compare
Psyr_4788 -1.1 -2.4 lipoprotein, putative compare
Psyr_4424 -1.1 -4.7 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0849 -1.1 -6.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0927 -1.1 -3.8 hypothetical protein compare
Psyr_3198 -1.1 -1.9 NADH dehydrogenase subunit B compare
Psyr_5065 -1.1 -5.8 ATP-dependent DNA helicase UvrD compare
Psyr_0303 -1.0 -2.2 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_1747 -1.0 -3.3 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3039 -1.0 -3.0 protein of unknown function DUF883 compare
Psyr_2617 -1.0 -1.2 Secretion protein HlyD compare
Psyr_1650 -1.0 -2.6 aminodeoxychorismate lyase apoprotein compare
Psyr_1962 -1.0 -6.0 TonB-dependent siderophore receptor compare
Psyr_1748 -1.0 -3.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0426 -1.0 -1.6 lipoprotein, putative compare
Psyr_3954 -1.0 -3.6 GTP-binding protein LepA compare
Psyr_3199 -1.0 -2.0 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2461 -1.0 -2.6 Uncharacterized conserved protein UCP030820 compare
Psyr_2346 -1.0 -4.1 conserved hypothetical protein compare
Psyr_0579 -1.0 -6.2 RNAse R compare
Psyr_1140 -1.0 -2.1 Disulfide bond formation protein DsbB compare
Psyr_1371 -0.9 -4.7 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1780 -0.9 -2.1 transcriptional regulator, TetR family compare
Psyr_4408 -0.9 -4.9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_5130 -0.9 -5.2 chromosome segregation ATPase compare
Psyr_4989 -0.9 -2.6 hypothetical protein compare
Psyr_0044 -0.9 -1.3 transferase hexapeptide repeat protein compare
Psyr_0393 -0.9 -3.0 Protein of unknown function DUF971 compare
Psyr_2642 -0.9 -3.1 hypothetical protein compare
Psyr_3889 -0.9 -2.2 conserved hypothetical protein compare
Psyr_2347 -0.9 -2.4 hypothetical protein compare
Psyr_1405 -0.9 -2.9 hypothetical protein compare
Psyr_0383 -0.9 -1.4 Twin-arginine translocation protein TatB compare
Psyr_0184 -0.8 -2.4 Protein of unknown function DUF484 compare
Psyr_4512 -0.8 -3.6 putative phage-related protein compare
Psyr_0475 -0.8 -2.1 Protein of unknown function YGGT compare
Psyr_1372 -0.8 -2.9 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_1751 -0.8 -3.2 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_5129 -0.8 -2.8 chromosome segregation DNA-binding protein compare
Psyr_0831 -0.8 -1.8 Two-component response regulator CbrB compare
Psyr_3695 -0.8 -5.2 RelA/SpoT protein compare
Psyr_4893 -0.8 -1.9 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3179 -0.8 -1.4 DNA translocase FtsK compare
Psyr_4089 -0.8 -3.5 PAS compare
Psyr_2080 -0.8 -3.2 aminodeoxychorismate synthase, subunit I compare
Psyr_1419 -0.8 -1.9 preQ(0) biosynthesis protein QueC compare
Psyr_1487 -0.8 -2.0 conserved hypothetical protein compare
Psyr_1556 -0.8 -1.1 hypothetical protein compare
Psyr_2285 -0.8 -1.4 Twin-arginine translocation pathway signal compare
Psyr_1801 -0.8 -2.6 1-aminocyclopropane-1-carboxylate deaminase compare
Psyr_0033 -0.8 -2.6 tryptophan synthase, alpha chain compare
Psyr_2076 -0.8 -3.5 UspA compare
Psyr_2906 -0.8 -1.6 Pilus retraction protein PilT compare
Psyr_0498 -0.8 -2.7 Protein of unknown function DUF1445 compare
Psyr_1791 -0.8 -2.1 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_1749 -0.8 -3.7 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_4316 -0.8 -2.0 conserved hypothetical protein compare
Psyr_3282 -0.8 -3.1 transcriptional regulator, TetR family compare
Psyr_1955 -0.8 -2.1 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_2755 -0.8 -2.0 2-nitropropane dioxygenase, NPD compare
Psyr_4874 -0.8 -2.0 ABC transporter compare
Psyr_3640 -0.8 -2.2 conserved hypothetical protein compare
Psyr_3720 -0.8 -4.3 Filamentation induced by cAMP protein Fic compare
Psyr_4887 -0.8 -5.4 Peptidase S41A, C-terminal protease compare
Psyr_0034 -0.8 -2.9 tryptophan synthase, beta chain compare
Psyr_0201 -0.7 -4.0 ATP-dependent DNA helicase RecG compare
Psyr_4882 -0.7 -4.0 protein translocase subunit secB compare
Psyr_3601 -0.7 -1.1 conserved hypothetical protein compare
Psyr_1424 -0.7 -1.4 Peptidase S24, S26A and S26B compare
Psyr_4940 -0.7 -1.7 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_3193 -0.7 -1.1 Transcription factor jumonji, jmjC compare
Psyr_4566 -0.7 -4.3 Peptidase M23B compare
Psyr_4627 -0.7 -1.5 dimethyladenosine transferase compare
Psyr_3146 -0.7 -1.7 general secretion pathway protein J, putative compare
Psyr_3620 -0.7 -1.3 hypothetical protein compare
Psyr_4658 -0.7 -1.7 CDS compare
Psyr_0529 -0.7 -2.2 Glycosyl transferase, group 1 compare
Psyr_4622 -0.7 -2.4 Nucleotidyl transferase compare
Psyr_2562 -0.7 -1.6 hypothetical protein compare
Psyr_4093 -0.7 -2.9 glutamate N-acetyltransferase compare
Psyr_2779 -0.7 -1.6 Phage minor tail compare
Psyr_1935 -0.7 -3.0 Protein of unknown function DUF796 compare
Psyr_0447 -0.7 -1.9 malonate decarboxylase subunit, putative compare
Psyr_1931 -0.7 -3.2 hypothetical protein compare
Psyr_2984 -0.7 -1.0 conserved hypothetical protein compare
Psyr_RNA28 -0.7 -1.2 tRNA-Val compare
Psyr_0276 -0.7 -1.6 zinc uptake regulation protein, putative compare
Psyr_2419 -0.7 -2.7 Protein of unknown function DUF480 compare
Psyr_3905 -0.7 -3.6 glycerol kinase compare
Psyr_3701 -0.7 -1.0 thioredoxin, putative compare
Psyr_0976 -0.7 -2.4 Malate:quinone-oxidoreductase compare
Psyr_4362 -0.7 -1.8 Rare lipoprotein A compare
Psyr_0907 -0.7 -1.8 conserved hypothetical protein compare
Psyr_2540 -0.7 -1.3 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4822 -0.7 -1.9 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_2462 -0.7 -2.6 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1895 -0.7 -1.5 conserved hypothetical protein compare
Psyr_2472 -0.7 -3.0 transcriptional regulator, MerR family compare
Psyr_0025 -0.6 -2.2 shikimate dehydrogenase compare
Psyr_3174 -0.6 -2.4 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_1418 -0.6 -1.9 Radical SAM compare
Psyr_4141 -0.6 -2.7 ABC transporter compare
Psyr_1417 -0.6 -3.4 TPR repeat protein compare
Psyr_4264 -0.6 -4.0 ABC transporter compare
Psyr_0179 -0.6 -1.7 Protein of unknown function DUF1289 compare
Psyr_0046 -0.6 -2.3 conserved hypothetical protein compare
Psyr_3677 -0.6 -1.5 Aminotransferase, class I and II compare
Psyr_1460 -0.6 -2.6 hypothetical protein compare
Psyr_1373 -0.6 -1.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3116 -0.6 -2.1 transcriptional regulator, CdaR family compare
Psyr_5073 -0.6 -3.0 conserved hypothetical protein compare
Psyr_0941 -0.6 -3.2 Conserved hypothetical protein 92 compare
Psyr_1725 -0.6 -1.1 Protein of unknown function DUF204 compare
Psyr_3606 -0.6 -2.5 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_1287 -0.6 -3.4 hypothetical protein compare
Psyr_1193 -0.6 -1.5 type III helper protein HrpZ1 compare
Psyr_3598 -0.6 -2.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3290 -0.6 -2.1 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1127 -0.6 -1.4 Heavy metal response regulator compare
Psyr_3458 -0.6 -1.5 Flagellar hook-basal body complex protein FliE compare
Psyr_2774 -0.6 -1.9 Bacteriophage lambda tail assembly I compare
Psyr_1021 -0.6 -2.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_2392 -0.6 -2.5 conserved hypothetical protein compare
Psyr_4834 -0.6 -4.4 histidine:proton symporter, AAT family compare
Psyr_4618 -0.6 -1.1 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3562 -0.6 -2.0 succinylglutamic semialdehyde dehydrogenase compare
Psyr_2595 -0.6 -2.5 Dimethylmenaquinone methyltransferase compare
Psyr_1733 -0.6 -1.3 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_1094 -0.6 -1.8 cold-shock DNA-binding protein family compare
Psyr_1984 -0.6 -2.0 3-isopropylmalate dehydratase, small subunit compare
Psyr_4309 -0.6 -2.8 hypothetical protein compare
Psyr_2502 -0.6 -1.8 conserved hypothetical protein compare
Psyr_1017 -0.6 -1.2 type III effector HopJ1 compare
Psyr_2664 -0.6 -3.2 hypothetical protein compare
Psyr_3090 -0.6 -1.6 hypothetical protein compare
Psyr_4884 -0.6 -2.6 Rhodanese-like protein compare
Psyr_4055 -0.6 -2.0 conserved domain protein compare
Psyr_2738 -0.6 -2.1 regulatory protein, LysR compare
Psyr_0377 -0.6 -3.2 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_4208 -0.6 -3.7 heme catalase/peroxidase compare
Psyr_1250 -0.6 -1.3 conserved hypothetical protein compare
Psyr_3429 -0.6 -1.4 CheW-like protein compare
Psyr_1624 -0.6 -2.0 transcriptional regulator, MarR family compare
Psyr_0557 -0.6 -2.4 phosphoserine phosphatase compare
Psyr_0060 -0.6 -2.5 Protein of unknown function DUF513 compare
Psyr_4727 -0.6 -2.4 glutathione S-transferase, putative compare
Psyr_2848 -0.6 -2.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Phloretin across organisms