Experiment set1IT037 for Caulobacter crescentus NA1000

Compare to:

D-Maltose monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_00684 +2.9 12.7 anti-sigma factor, ChrR-family compare
CCNA_01851 +2.5 19.0 quinol cytochrome oxidase polypeptide II compare
CCNA_01848 +2.4 14.8 quinol cytochrome oxidase polypeptide IV compare
CCNA_01850 +2.4 17.8 quinol cytochrome oxidase polypeptide I compare
CCNA_01849 +2.1 10.8 quinol cytochrome oxidase polypeptide III compare
CCNA_01840 +2.1 16.9 MerR-family transcriptional regulator compare
CCNA_01712 +2.0 15.6 CopY/TcrY family transcriptional repressor compare
CCNA_02000 +1.9 2.7 SSU ribosomal protein S2P compare
CCNA_02591 +1.9 9.4 glutaredoxin compare
CCNA_00699 +1.9 8.1 LSU ribosomal protein L28P compare
CCNA_02250 +1.8 4.5 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_03280 +1.8 15.2 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02957 +1.8 6.0 ArsR-family transcriptional regulator compare
CCNA_01804 +1.8 9.5 glutathione peroxidase compare
CCNA_01979 +1.8 12.1 LexA repressor compare
CCNA_02103 +1.8 11.7 hypothetical protein compare
CCNA_01526 +1.8 5.9 flagellar biosynthesis regulatory protein flaF compare
CCNA_01801 +1.8 7.9 hypothetical protein compare
CCNA_00518 +1.8 11.3 LSU ribosomal protein L25P compare
CCNA_R0037 +1.8 6.5 tRNA-Glu compare
CCNA_01752 +1.7 9.1 YicC-family protein compare
CCNA_01790 +1.7 5.6 protein translocase subunit secG compare
CCNA_01573 +1.7 9.9 ArsR-family transcriptional regulator compare
CCNA_01690 +1.7 5.1 MAPEG family membrane protein compare
CCNA_01684 +1.7 7.9 phenylalanine-4-hydroxylase compare
CCNA_01593 +1.7 10.9 Xaa-pro aminopeptidase compare
CCNA_01186 +1.7 6.1 hypothetical protein compare
CCNA_01913 +1.7 10.0 MarR-family transcriptional regulator compare
CCNA_02619 +1.7 13.5 stomatin/prohibitin-related protein compare
CCNA_01931 +1.6 9.2 TetR-family transcriptional regulator compare
CCNA_02021 +1.6 6.9 hypothetical protein compare
CCNA_03289 +1.6 8.9 HicB-family RNA-binding protein compare
CCNA_03951 +1.6 7.0 hypothetical protein compare
CCNA_03271 +1.6 9.8 methionine gamma-lyase compare
CCNA_01655 +1.6 8.2 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01742 +1.6 5.7 hypothetical protein compare
CCNA_01847 +1.6 11.2 cytochrome c oxidase assembly protein Surf1 compare
CCNA_02252 +1.6 5.2 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_03012 +1.6 9.0 peroxiredoxin compare
CCNA_02004 +1.6 2.9 SOS-induced inhibitor of cell division SidA compare
CCNA_03936 +1.6 3.7 hypothetical protein compare
CCNA_00756 +1.6 3.6 hypothetical protein compare
CCNA_01780 +1.6 12.0 exopolyphosphatase compare
CCNA_00895 +1.6 9.2 hypothetical protein compare
CCNA_02617 +1.6 10.4 histidinol-phosphate aminotransferase compare
CCNA_03989 +1.6 11.0 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_03740 +1.6 6.8 cysteine synthase compare
CCNA_01968 +1.5 4.1 pentapeptide repeats containing protein compare
CCNA_00505 +1.5 5.8 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_02980 +1.5 9.6 tryptophan 2,3-dioxygenase compare
CCNA_01728 +1.5 7.4 short chain dehydrogenase compare
CCNA_03064 +1.5 7.1 PadR-family transcriptional regulator compare
CCNA_00939 +1.5 5.4 MarR-family transcriptional regulator compare
CCNA_03252 +1.5 12.0 CopY/TcrY-family transcriptional regulator compare
CCNA_02760 +1.5 3.0 hypothetical protein compare
CCNA_01541 +1.5 9.8 LysR-family transcriptional regulator compare
CCNA_01094 +1.5 2.8 hypothetical protein compare
CCNA_00264 +1.5 10.3 C4-dicarboxylate transport protein compare
CCNA_02416 +1.5 6.7 DNA-binding protein HU compare
CCNA_03961 +1.5 3.1 hypothetical protein compare
CCNA_03325 +1.5 4.9 hypothetical protein compare
CCNA_02646 +1.5 2.2 cell division protein MraZ compare
CCNA_00527 +1.5 7.4 hypothetical protein compare
CCNA_03479 +1.5 7.4 MarR-family transcriptional regulator compare
CCNA_02448 +1.5 11.0 hypothetical protein compare
CCNA_01528 +1.5 8.0 flagellin fljK compare
CCNA_02728 +1.5 6.9 hypothetical protein compare
CCNA_03524 +1.4 8.0 di-/tripeptide transporter compare
CCNA_01681 +1.4 4.9 RimI-like acetyltransferase compare
CCNA_03287 +1.4 8.3 PadR-family transcriptional regulator compare
CCNA_01679 +1.4 8.2 succinylglutamic semialdehyde dehydrogenase compare
CCNA_00769 +1.4 8.6 TetR family transcriptional regulator compare
CCNA_02447 +1.4 10.4 PspA/IM30 family regulatory protein compare
CCNA_03123 +1.4 8.7 ArsR-family transcriptional regulator compare
CCNA_03944 +1.4 1.3 hypothetical protein compare
CCNA_03959 +1.4 1.1 hypothetical protein compare
CCNA_02805 +1.4 5.7 hypothetical protein compare
CCNA_03964 +1.4 3.8 hypothetical protein compare
CCNA_02379 +1.4 7.7 hypothetical protein compare
CCNA_02942 +1.4 5.0 nucleoside-diphosphate-sugar epimerase compare
CCNA_02063 +1.4 6.6 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_02289 +1.4 7.8 MarR/EmrR family transcriptional regulator compare
CCNA_03372 +1.4 3.6 bacterioferritin-associated ferredoxin compare
CCNA_00846 +1.4 11.8 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00506 +1.4 7.0 cytochrome b compare
CCNA_03762 +1.4 4.8 acetolactate synthase-related protein compare
CCNA_01525 +1.4 6.0 flagellar biosynthesis repressor flbT compare
CCNA_01361 +1.4 2.7 PepSY superfamily protein compare
CCNA_01074 +1.4 3.0 entericidin B-like protein compare
CCNA_01193 +1.4 9.7 amylosucrase compare
CCNA_00931 +1.4 8.5 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_02132 +1.4 5.8 LacI-family transcriptional regulator compare
CCNA_02025 +1.4 3.2 hypothetical protein compare
CCNA_00147 +1.3 2.3 hypothetical protein compare
CCNA_02616 +1.3 8.0 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01826 +1.3 7.9 vitamin B12 receptor compare
CCNA_02287 +1.3 7.0 TetR-family transcriptional regulator compare
CCNA_03129 +1.3 8.7 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_03515 +1.3 5.4 hypothetical protein compare
CCNA_02475 +1.3 9.0 transcriptional regulator vanR compare
CCNA_01059 +1.3 11.1 S-layer protein rsaA compare
CCNA_02330 +1.3 4.7 hypothetical protein compare
CCNA_01339 +1.3 5.2 ArsR-family transcriptional regulator compare
CCNA_00447 +1.3 6.2 chemotaxis protein cheD compare
CCNA_03952 +1.3 6.6 hypothetical protein compare
CCNA_02339 +1.3 7.9 methyltransferase compare
CCNA_00441 +1.3 5.5 chemotaxis receiver domain protein cheYI compare
CCNA_R0054 +1.3 2.2 tRNA-Gly compare
CCNA_01680 +1.3 8.1 succinylarginine dihydrolase compare
CCNA_02729 +1.3 9.9 oligopeptide transporter compare
CCNA_01678 +1.3 6.1 arginine N-succinyltransferase, beta chain compare
CCNA_02367 +1.3 9.4 CelR-family transcriptional regulator compare
CCNA_01942 +1.3 4.9 Rrf2 family protein compare
CCNA_01393 +1.3 9.4 soluble lytic murein transglycosylase compare
CCNA_00929 +1.3 8.7 Riboflavin-specific deaminase family protein compare
CCNA_00750 +1.3 9.0 FeaR-family transcriptional regulator compare
CCNA_01748 +1.3 7.0 methyltransferase compare
CCNA_03108 +1.3 9.0 TonB-dependent outer membrane receptor compare
CCNA_00114 +1.3 4.7 MarR/EmrR-family transcriptional regulator compare
CCNA_02467 +1.3 7.5 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_01608 +1.3 5.5 TetR-family transcriptional regulator compare
CCNA_00028 +1.2 5.1 TonB-dependent receptor compare
CCNA_03893 +1.2 2.6 hypothetical protein compare
CCNA_02843 +1.2 3.1 toxin protein parE-3 compare
CCNA_03107 +1.2 7.2 cytidine deaminase compare
CCNA_02338 +1.2 7.3 hypothetical protein compare
CCNA_02164 +1.2 3.5 glutamate dehydrogenase/leucine dehydrogenase compare
CCNA_03516 +1.2 6.0 protoheme IX farnesyltransferase coxE compare
CCNA_03808 +1.2 7.3 organic solvent resistance transport system Ttg2C protein compare
CCNA_01533 +1.2 5.2 hypothetical protein compare
CCNA_03030 +1.2 7.9 cytochrome c2 compare
CCNA_01926 +1.2 5.5 GGDEF diguanylate cyclase DgcB compare
CCNA_00847 +1.2 6.3 leucine-responsive regulatory protein compare
CCNA_01619 +1.2 6.2 NYN domain protein compare
CCNA_01827 +1.2 6.0 cobyric acid synthase CobQ compare
CCNA_02841 +1.2 3.6 hypothetical protein compare
CCNA_01677 +1.2 5.6 carboxypeptidase G2 precursor compare
CCNA_01406 +1.2 6.1 metal-dependent hydrolase compare
CCNA_02910 +1.2 9.4 TonB-dependent receptor compare
CCNA_01415 +1.2 8.1 methyltransferase compare
CCNA_03689 +1.2 8.0 alanine dehydrogenase compare
CCNA_00998 +1.2 5.4 ROS/MUCR transcriptional regulator compare
CCNA_02081 +1.2 3.2 Sec-independent protein translocase protein tatB compare
CCNA_00507 +1.2 5.1 cytochrome c1 compare
CCNA_03519 +1.2 4.1 PadR-family transcriptional regulator compare
CCNA_02273 +1.2 3.9 glutathione peroxidase compare
CCNA_03391 +1.2 6.7 Cro/CI family transcriptional regulator compare
CCNA_00362 +1.2 3.2 zinc uptake regulation protein compare
CCNA_02387 +1.2 9.8 glutathione reductase compare
CCNA_01405 +1.2 4.6 GIY-YIG domain protein compare
CCNA_00705 +1.2 3.4 hypothetical protein compare
CCNA_02534 +1.2 2.0 hypothetical protein compare
CCNA_01813 +1.2 6.3 tRNA-dihydrouridine synthase compare
CCNA_02012 +1.2 7.0 metal-dependent hydrolase compare
CCNA_00448 +1.2 6.1 cheU protein compare
CCNA_00919 +1.2 3.1 hypothetical protein compare
CCNA_01751 +1.2 3.9 aminodeoxychorismate lyase compare
CCNA_01057 +1.2 7.2 hypothetical protein compare
CCNA_01008 +1.2 7.9 urocanate hydratase compare
CCNA_02644 +1.2 2.8 cell division protein FtsL compare
CCNA_01242 +1.2 10.3 amino acid permease compare
CCNA_01575 +1.2 7.6 glucose / sorbosone dehydrogenase compare
CCNA_01414 +1.2 6.9 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_01235 +1.1 6.4 AcrR-family transcriptional regulator compare
CCNA_01802 +1.1 2.1 hypothetical protein compare
CCNA_02067 +1.1 5.9 conserved membrane spanning protein compare
CCNA_00872 +1.1 3.1 glutaredoxin compare
CCNA_00073 +1.1 9.5 HemY domain membrane protein compare
CCNA_01025 +1.1 6.8 hypothetical protein compare
CCNA_03556 +1.1 5.5 multidrug efflux system protein compare
CCNA_00027 +1.1 2.5 2OG-Fe(II) oxygenase compare
CCNA_03089 +1.1 5.3 hypothetical protein compare
CCNA_03156 +1.1 4.7 putative periplasmic protein compare
CCNA_01949 +1.1 3.1 bactofilin A BacA compare
CCNA_02297 +1.1 4.2 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_00954 +1.1 8.0 AAA-family response regulator flbD compare
CCNA_01731 +1.1 4.4 colicin V production protein CvpA compare
CCNA_02363 +1.1 5.1 hypothetical protein compare
CCNA_00400 +1.1 4.4 MarR/EmrR-family transcriptional regulator compare
CCNA_03975 +1.1 4.1 hypothetical protein compare
CCNA_01338 +1.1 5.0 glyoxalase family protein compare
CCNA_01184 +1.1 6.1 MutT/nudix family hydrolase compare
CCNA_00834 +1.1 4.6 flagellin FljM compare
CCNA_01020 +1.1 4.9 LacI-family transcriptional regulator compare
CCNA_02125 +1.1 8.0 polar development protein podJ compare
CCNA_03214 +1.1 5.3 hypothetical protein compare
CCNA_00675 +1.1 4.4 VapC-like PIN domain ribonuclease compare
CCNA_01276 +1.1 2.6 cytochrome c5 compare
CCNA_00885 +1.1 5.5 MazE-like antitoxin protein compare
CCNA_01420 +1.1 5.5 NrdR family transcriptional regulator compare
CCNA_01173 +1.1 5.3 chorismate mutase compare
CCNA_01933 +1.1 3.3 hypothetical protein compare
CCNA_00682 +1.1 5.2 MarR-family transcriptional regulator compare
CCNA_02576 +1.1 5.3 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_02854 +1.1 3.9 two-component response regulator compare
CCNA_01220 +1.1 3.8 7-keto-8-aminopelargonate synthetase compare
CCNA_01278 +1.1 5.0 hypothetical protein compare
CCNA_00803 +1.1 4.2 chemotaxis protein cheW compare
CCNA_01163 +1.1 10.0 ice nucleation protein compare
CCNA_02761 +1.1 3.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in carbon source experiments

For carbon source D-Maltose monohydrate across organisms