Experiment set1IT037 for Burkholderia phytofirmans PsJN

Compare to:

LB with Zinc sulfate heptahydrate 0.5 mM

200 most important genes:

  gene name fitness t score description  
BPHYT_RS00130 -6.3 -11.2 ATPase P conserved
BPHYT_RS01485 -4.9 -1.9 histidine kinase compare
BPHYT_RS00140 -4.1 -4.3 MerR family transcriptional regulator compare
BPHYT_RS02965 -3.7 -3.1 membrane protein compare
BPHYT_RS14855 -3.6 -3.6 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS16710 -3.4 -2.3 LysR family transcriptional regulator compare
BPHYT_RS03655 -3.4 -1.9 membrane protein compare
BPHYT_RS16840 -3.4 -4.0 transketolase compare
BPHYT_RS16215 -3.0 -5.8 sensor histidine kinase compare
BPHYT_RS06175 -3.0 -7.9 LPS biosynthesis compare
BPHYT_RS23840 -2.9 -5.3 methyltransferase compare
BPHYT_RS17100 -2.9 -8.9 RNA pyrophosphohydrolase compare
BPHYT_RS01625 -2.8 -4.1 chemotaxis protein CheY compare
BPHYT_RS14865 -2.7 -2.6 UDP-glucose 6-dehydrogenase compare
BPHYT_RS16210 -2.4 -6.6 peptidase compare
BPHYT_RS08850 -2.4 -2.5 transcriptional regulator compare
BPHYT_RS03480 -2.3 -4.8 ferritin compare
BPHYT_RS09515 -2.3 -6.3 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS15075 -2.2 -3.6 dihydrokaempferol 4-reductase compare
BPHYT_RS16255 -2.2 -5.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS02860 -2.2 -1.7 membrane protein compare
BPHYT_RS33920 -2.2 -9.5 type II citrate synthase compare
BPHYT_RS02865 -2.1 -3.0 hypothetical protein compare
BPHYT_RS01620 -2.0 -8.1 sensor histidine kinase compare
BPHYT_RS12615 -1.9 -2.1 dihydrodipicolinate synthase compare
BPHYT_RS18760 -1.9 -4.0 flagellar biosynthesis protein FliT compare
BPHYT_RS02610 -1.9 -4.7 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS17240 -1.9 -1.7 cell division protein FtsW compare
BPHYT_RS04385 -1.8 -4.8 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS02595 -1.8 -1.9 sulfurtransferase compare
BPHYT_RS13245 -1.7 -7.2 hypothetical protein compare
BPHYT_RS36275 -1.7 -1.9 hypothetical protein compare
BPHYT_RS12465 -1.7 -2.9 inositol monophosphatase compare
BPHYT_RS06375 -1.6 -5.2 ribonuclease compare
BPHYT_RS03640 -1.6 -2.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS08565 -1.5 -1.8 dihydroorotate dehydrogenase compare
BPHYT_RS04370 -1.5 -2.5 glycosyl transferase compare
BPHYT_RS21905 -1.5 -1.5 IclR family transcriptional regulator compare
BPHYT_RS16245 -1.5 -4.6 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS11635 -1.5 -1.3 RNA polymerase subunit sigma-24 compare
BPHYT_RS11310 -1.4 -1.7 LysR family transcriptional regulator compare
BPHYT_RS33360 -1.4 -2.6 formyl-CoA transferase compare
BPHYT_RS15620 -1.4 -4.3 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS08235 -1.4 -1.5 nucleoprotein, Hfg, host factor I compare
BPHYT_RS09765 -1.4 -2.3 G-D-S-L family lipolytic protein compare
BPHYT_RS04890 -1.4 -1.6 cobalamin biosynthesis protein CobD compare
BPHYT_RS06610 -1.4 -2.7 triosephosphate isomerase compare
BPHYT_RS15710 -1.4 -1.0 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS36525 -1.3 -3.5 hypothetical protein compare
BPHYT_RS08150 -1.3 -1.1 membrane protein compare
BPHYT_RS11155 -1.3 -1.5 hypothetical protein compare
BPHYT_RS12265 -1.3 -1.5 alanine acetyltransferase compare
BPHYT_RS16675 -1.3 -2.1 dihydroorotase compare
BPHYT_RS16340 -1.3 -6.1 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS24060 -1.3 -2.1 FAD-linked oxidase compare
BPHYT_RS23270 -1.2 -1.6 enoyl-CoA hydratase compare
BPHYT_RS09315 -1.2 -1.1 chemotaxis protein CheY compare
BPHYT_RS09480 -1.2 -1.2 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS20380 -1.2 -1.9 LysR family transcriptional regulator compare
BPHYT_RS17760 -1.2 -5.5 ABC transporter permease compare
BPHYT_RS18785 -1.2 -1.7 flagellar assembly protein FliH compare
BPHYT_RS06405 -1.2 -6.8 phosphoribosylamine--glycine ligase compare
BPHYT_RS12840 -1.1 -3.5 pyruvate dehydrogenase compare
BPHYT_RS17890 -1.1 -2.3 shikimate kinase compare
BPHYT_RS07705 -1.1 -2.4 arginine succinyltransferase compare
BPHYT_RS26080 -1.1 -1.6 ABC transporter ATPase compare
BPHYT_RS14845 -1.1 -2.9 cysteine synthase compare
BPHYT_RS13835 -1.1 -1.2 S-adenosylhomocysteine nucleosidase compare
BPHYT_RS34810 -1.1 -4.5 RND transporter compare
BPHYT_RS08665 -1.1 -1.2 hypothetical protein compare
BPHYT_RS25870 -1.0 -1.1 type III secretion system ATPase compare
BPHYT_RS18590 -1.0 -1.0 hypothetical protein compare
BPHYT_RS19570 -1.0 -7.6 sodium/hydrogen exchanger compare
BPHYT_RS16835 -1.0 -5.2 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS12845 -1.0 -8.1 ATPase compare
BPHYT_RS06685 -1.0 -2.0 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS02285 -1.0 -4.5 cell division protein compare
BPHYT_RS28285 -1.0 -2.0 MFS transporter compare
BPHYT_RS02365 -1.0 -1.2 hypothetical protein compare
BPHYT_RS11555 -1.0 -2.7 allantoinase compare
BPHYT_RS17640 -1.0 -2.7 2-alkenal reductase compare
BPHYT_RS16345 -1.0 -4.3 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS20245 -1.0 -5.0 iron ABC transporter substrate-binding protein compare
BPHYT_RS17520 -1.0 -3.5 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS11405 -1.0 -3.1 hypothetical protein compare
BPHYT_RS03400 -1.0 -1.1 ATP-dependent DNA helicase RecG compare
BPHYT_RS36420 -1.0 -3.2 hypothetical protein compare
BPHYT_RS36035 -1.0 -1.4 hypothetical protein compare
BPHYT_RS02010 -1.0 -2.0 copper homeostasis protein CutC compare
BPHYT_RS04285 -1.0 -1.6 rhamnosyltransferase compare
BPHYT_RS04290 -1.0 -1.8 glycosyl transferase family 2 compare
BPHYT_RS18765 -1.0 -4.7 flagellar biosynthesis protein FliS compare
BPHYT_RS20235 -1.0 -5.4 iron ABC transporter compare
BPHYT_RS02435 -1.0 -1.0 hypothetical protein compare
BPHYT_RS09500 -1.0 -3.9 glucose-6-phosphate isomerase compare
BPHYT_RS10690 -1.0 -2.0 Rieske (2Fe-2S) protein compare
BPHYT_RS10720 -0.9 -0.7 hypothetical protein compare
BPHYT_RS02590 -0.9 -4.2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS18965 -0.9 -1.6 chemotaxis protein CheY compare
BPHYT_RS05330 -0.9 -1.9 phosphohydrolase compare
BPHYT_RS08245 -0.9 -4.7 anti-sigma factor compare
BPHYT_RS18790 -0.9 -4.6 ATP synthase compare
BPHYT_RS18910 -0.9 -1.0 FlgN compare
BPHYT_RS19565 -0.9 -4.3 gamma-glutamyl:cysteine ligase compare
BPHYT_RS33610 -0.9 -1.4 DNA polymerase I compare
BPHYT_RS22455 -0.9 -1.2 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS33840 -0.9 -4.9 amidophosphoribosyltransferase compare
BPHYT_RS02005 -0.9 -1.0 diguanylate phosphodiesterase compare
BPHYT_RS20475 -0.9 -1.7 hypothetical protein compare
BPHYT_RS02930 -0.9 -1.7 KpsF/GutQ family protein compare
BPHYT_RS22470 -0.9 -1.5 hydrolase compare
BPHYT_RS29720 -0.9 -1.2 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS00540 -0.9 -1.7 hypothetical protein compare
BPHYT_RS18265 -0.9 -1.5 phenylacetate-CoA oxygenase subunit PaaJ compare
BPHYT_RS26855 -0.9 -3.1 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS21340 -0.9 -2.9 2OG-Fe(II) oxygenase compare
BPHYT_RS34805 -0.9 -4.3 ABC transporter compare
BPHYT_RS28705 -0.9 -1.3 IclR family transcriptional regulator compare
BPHYT_RS06975 -0.9 -1.5 glutamate racemase compare
BPHYT_RS20220 -0.9 -1.6 antibiotic synthesis protein MbtH compare
BPHYT_RS31205 -0.9 -1.4 peptide ABC transporter ATP-binding protein compare
BPHYT_RS03645 -0.9 -1.8 tRNA dimethylallyltransferase compare
BPHYT_RS03015 -0.9 -0.8 aldolase compare
BPHYT_RS26775 -0.8 -1.2 chemotaxis protein CheB compare
BPHYT_RS33580 -0.8 -3.2 geranyltranstransferase compare
BPHYT_RS27890 -0.8 -1.0 hypothetical protein compare
BPHYT_RS03280 -0.8 -1.4 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS14895 -0.8 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS07585 -0.8 -3.7 N-formylglutamate deformylase (EC 3.5.1.68) (from data) compare
BPHYT_RS18260 -0.8 -4.3 phenylacetic acid degradation protein compare
BPHYT_RS25000 -0.8 -1.5 MFS transporter compare
BPHYT_RS19335 -0.8 -2.7 hypothetical protein compare
BPHYT_RS30365 -0.8 -0.9 beta-lactamase compare
BPHYT_RS35750 -0.8 -1.3 hypothetical protein compare
BPHYT_RS32225 -0.8 -1.4 hypothetical protein compare
BPHYT_RS23230 -0.8 -1.3 histidine kinase compare
BPHYT_RS03725 -0.8 -0.9 serine hydroxymethyltransferase compare
BPHYT_RS17885 -0.8 -4.1 3-dehydroquinate synthase compare
BPHYT_RS03170 -0.8 -2.0 membrane protein compare
BPHYT_RS03455 -0.8 -1.7 paraquat-inducible protein A compare
BPHYT_RS00325 -0.8 -1.5 hypothetical protein compare
BPHYT_RS07815 -0.8 -2.2 phosphonate transporter compare
BPHYT_RS09465 -0.8 -1.5 transcriptional regulator compare
BPHYT_RS17075 -0.8 -3.5 ABC transporter permease compare
BPHYT_RS14060 -0.8 -1.0 peptidase M23 compare
BPHYT_RS19115 -0.8 -2.4 acyl carrier protein compare
BPHYT_RS35205 -0.8 -1.4 hypothetical protein compare
BPHYT_RS17405 -0.8 -0.9 indole-3-glycerol phosphate synthase compare
BPHYT_RS36480 -0.8 -1.7 hypothetical protein compare
BPHYT_RS32525 -0.8 -1.4 hypothetical protein compare
BPHYT_RS23455 -0.8 -1.0 phosphorylase compare
BPHYT_RS26925 -0.8 -1.3 NIPSNAP family containing protein compare
BPHYT_RS22750 -0.8 -2.6 Flagellar brake protein YcgR 2 compare
BPHYT_RS14735 -0.8 -0.9 hypothetical protein compare
BPHYT_RS25800 -0.8 -1.1 sugar ABC transporter permease compare
BPHYT_RS19260 -0.8 -0.9 hypothetical protein compare
BPHYT_RS25875 -0.7 -1.2 type III secretion protein compare
BPHYT_RS07320 -0.7 -1.2 dihydrodipicolinate synthetase compare
BPHYT_RS23475 -0.7 -1.4 luciferase compare
BPHYT_RS09980 -0.7 -1.2 TetR family transcriptional regulator compare
BPHYT_RS16270 -0.7 -2.5 phosphoglycerate kinase compare
BPHYT_RS13605 -0.7 -0.7 tRNA-Pro compare
BPHYT_RS04255 -0.7 -1.9 diadenosine tetraphosphatase compare
BPHYT_RS23205 -0.7 -2.2 alkylhydroperoxidase compare
BPHYT_RS35885 -0.7 -2.8 hypothetical protein compare
BPHYT_RS12785 -0.7 -2.4 Rrf2 family transcriptional regulator compare
BPHYT_RS26435 -0.7 -1.1 hypothetical protein compare
BPHYT_RS21330 -0.7 -0.8 hypothetical protein compare
BPHYT_RS22910 -0.7 -1.0 hypothetical protein compare
BPHYT_RS31460 -0.7 -1.6 hypothetical protein compare
BPHYT_RS35835 -0.7 -2.1 hypothetical protein compare
BPHYT_RS17745 -0.7 -3.9 toluene tolerance family protein compare
BPHYT_RS05880 -0.7 -1.9 hypothetical protein compare
BPHYT_RS34780 -0.7 -2.1 phytoene synthase compare
BPHYT_RS32115 -0.7 -1.1 hypothetical protein compare
BPHYT_RS02570 -0.7 -2.2 phosphocarrier protein HPr compare
BPHYT_RS17905 -0.7 -1.3 fimbrial assembly family protein compare
BPHYT_RS21620 -0.7 -1.2 GCN5 family acetyltransferase compare
BPHYT_RS21335 -0.7 -1.5 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS32395 -0.7 -1.0 hypothetical protein compare
BPHYT_RS11900 -0.7 -1.6 LysR family transcriptional regulator compare
BPHYT_RS06530 -0.7 -1.2 membrane protein compare
BPHYT_RS11125 -0.7 -1.1 alkylhydroperoxidase compare
BPHYT_RS26030 -0.7 -1.5 cysteine hydrolase compare
BPHYT_RS35215 -0.7 -0.8 dehydrogenase compare
BPHYT_RS03025 -0.7 -1.8 methyl-accepting chemotaxis protein compare
BPHYT_RS15015 -0.7 -0.9 ArsR family transcriptional regulator compare
BPHYT_RS09330 -0.7 -5.0 phytoene synthase compare
BPHYT_RS26930 -0.7 -3.0 mechanosensitive ion channel protein compare
BPHYT_RS26920 -0.7 -2.4 major facilitator transporter compare
BPHYT_RS09395 -0.7 -2.0 ABC transporter permease compare
BPHYT_RS15415 -0.7 -5.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS01530 -0.7 -1.2 penicillin-binding protein 2 compare
BPHYT_RS02575 -0.7 -3.5 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS21530 -0.7 -1.6 RNA polymerase subunit sigma-24 compare
BPHYT_RS18750 -0.7 -2.6 flagellar biosynthetic protein FlhB compare
BPHYT_RS20215 -0.7 -1.9 RNA polymerase sigma 70 compare
BPHYT_RS35955 -0.7 -1.0 hypothetical protein compare
BPHYT_RS15020 -0.7 -3.2 tetratricopeptide repeat protein compare
BPHYT_RS35665 -0.7 -2.7 ABC transporter permease compare


Specific Phenotypes

For 1 genes in this experiment

For stress Zinc sulfate heptahydrate in Burkholderia phytofirmans PsJN

For stress Zinc sulfate heptahydrate across organisms