Experiment set1IT036 for Sinorhizobium meliloti 1021

Compare to:

D-Tagatose carbon source

200 most important genes:

  gene name fitness t score description  
SMc01726 -9.0 -6.2 acetylglutamate kinase compare
SMc00235 -8.5 -5.9 anthranilate phosphoribosyltransferase compare
SMc00236 -8.4 -5.8 Indole-3-glycerol phosphate synthase compare
SMc02899 -8.4 -10.0 prephenate dehydratase compare
SMc02572 -8.4 -6.0 imidazole glycerol phosphate synthase subunit HisH compare
SMc01494 -8.3 -9.9 phosphoserine phosphatase compare
SMc00917 -8.2 -5.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02569 -8.1 -5.6 imidazole glycerol phosphate synthase subunit HisF compare
SMc02766 -8.0 -15.5 tryptophan synthase subunit beta compare
SMc00640 -7.9 -7.7 phosphoserine aminotransferase compare
SMc01843 -7.9 -12.1 5,10-methylenetetrahydrofolate reductase compare
SMc02717 -7.8 -9.4 2-isopropylmalate synthase compare
SMc02767 -7.6 -11.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc04026 -7.5 -9.0 glutamate synthase compare
SMc04045 -7.4 -7.3 dihydroxy-acid dehydratase compare
SMc01431 -7.4 -11.3 acetolactate synthase 3 catalytic subunit compare
SMc04405 -7.3 -11.1 3-isopropylmalate dehydrogenase compare
SMc03797 -7.2 -10.9 homoserine O-succinyltransferase compare
SMc03777 -7.1 -6.9 gamma-glutamyl phosphate reductase compare
SMc00293 -7.0 -15.1 homoserine dehydrogenase compare
SMc00494 -7.0 -2.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SM_b21374 -6.8 -5.0 tagatose kinase (EC 2.7.1.101) (from data) compare
SMc04028 -6.8 -18.7 glutamate synthase compare
SMc03112 -6.8 -18.7 B12-dependent methionine synthase compare
SMc00412 -6.8 -4.7 orotidine 5'-phosphate decarboxylase compare
SMc03776 -6.8 -4.7 gamma-glutamyl kinase compare
SM_b21174 -6.8 -6.6 phosphate uptake ABC transporter permease compare
SMc01881 -6.7 -4.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00918 -6.7 -11.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc02217 -6.7 -8.0 O-succinylhomoserine sulfhydrylase compare
SMc02765 -6.6 -12.2 tryptophan synthase subunit alpha compare
SMa1635 -6.6 -2.5 hypothetical protein compare
SMc02725 -6.6 -13.9 anthranilate synthase compare
SMc03823 -6.5 -12.2 isopropylmalate isomerase large subunit compare
SMc00488 -6.5 -18.1 phosphoribosylformylglycinamidine synthase II compare
SMc04002 -6.5 -8.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01801 -6.5 -4.8 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02245 -6.4 -8.4 dihydroorotate dehydrogenase 2 compare
SMc02755 -6.3 -6.1 S-adenosyl-L-homocysteine hydrolase compare
SMc03070 -6.2 -9.5 glucose-6-phosphate 1-dehydrogenase compare
SMc00614 -6.2 -8.3 phosphoribosylglycinamide formyltransferase compare
SMc03895 -6.1 -21.5 pyruvate carboxylase compare
SMc00615 -6.1 -8.8 phosphoribosylaminoimidazole synthetase compare
SMc00993 -6.1 -12.3 phosphoribosylamine--glycine ligase compare
SMc01004 -6.1 -10.0 phosphoribosyl-AMP cyclohydrolase compare
SMc02570 -6.0 -6.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03229 -5.8 -3.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00815 -5.8 -3.7 inosine 5'-monophosphate dehydrogenase compare
SMc02137 -5.8 -5.6 ornithine carbamoyltransferase compare
SMc03981 -5.8 -7.4 phosphoglycerate kinase compare
SMc01361 -5.8 -7.9 dihydroorotase compare
SMc00554 -5.7 -11.7 amidophosphoribosyltransferase compare
SMc00493 -5.7 -9.1 phosphoribosylformylglycinamidine synthase I compare
SM_b21175 -5.7 -6.5 phosphate uptake ABC transporter permease compare
SMc02574 -5.6 -8.5 imidazoleglycerol-phosphate dehydratase compare
SMc04088 -5.6 -8.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03979 -5.6 -3.8 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02166 -5.6 -13.7 dihydroorotase compare
SMc02165 -5.5 -11.9 orotate phosphoribosyltransferase compare
SMc00495 -5.5 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01360 -5.5 -5.2 aspartate carbamoyltransferase catalytic subunit compare
SMc02307 -5.5 -9.1 histidinol dehydrogenase compare
SMc01880 -5.4 -3.7 pantoate--beta-alanine ligase compare
SM_b21373 -5.2 -5.1 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SMc01215 -5.2 -3.6 carbamoyl phosphate synthase large subunit compare
SMc01054 -5.1 -6.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00090 -5.1 -12.0 sulfate adenylyltransferase compare
SMc00963 -5.1 -7.0 hypothetical protein compare
SMc01569 -5.0 -2.5 carbamoyl phosphate synthase small subunit compare
SM_b21177 -5.0 -10.8 phosphate uptake ABC transporter ATP-binding protein compare
SMc04001 -4.7 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01770 -4.7 -2.1 serine hydroxymethyltransferase compare
SMc00641 -4.6 -6.7 D-3-phosphoglycerate dehydrogenase compare
SMc02707 -4.6 -6.1 hypothetical protein compare
SMc03978 -4.6 -4.5 transketolase compare
SMc02138 -4.6 -10.3 acetylornithine transaminase compare
SMc00017 -4.6 -2.3 homoserine kinase compare
SMc02246 -4.5 -1.7 hypothetical protein compare
SMc02123 -4.5 -5.9 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc03795 -4.5 -2.3 isopropylmalate isomerase small subunit compare
SMc00294 -4.5 -13.9 aminotransferase compare
SMc03763 -4.4 -5.2 cytosine-specific methyltransferase compare
SMc02124 -4.3 -19.2 nitrite reductase compare
SMc03068 -4.3 -11.2 phosphogluconate dehydratase compare
SMc01206 -4.3 -2.7 queuine tRNA-ribosyltransferase compare
SMc04005 -4.2 -10.3 pyruvate kinase compare
SMc00092 -4.2 -14.1 phosphoadenosine phosphosulfate reductase compare
SM_b21377 -4.0 -6.8 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc04346 -4.0 -5.5 ketol-acid reductoisomerase compare
SMc01053 -4.0 -5.1 siroheme synthase compare
SM_b21176 -3.8 -6.8 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00091 -3.8 -11.8 sulfate adenylyltransferase compare
SMc02983 -3.7 -10.2 ornithine, DAP, or arginine decarboxylase compare
SMc00131 -3.7 -18.6 transcriptional regulator compare
SMc01028 -3.5 -17.3 phosphopyruvate hydratase compare
SMc00876 -3.4 -6.5 ATP-binding MRP protein compare
SMc02172 -3.3 -12.4 transcriptional regulator compare
SMc03826 -3.3 -6.4 argininosuccinate synthase compare
SMc01578 -3.3 -11.5 aspartate aminotransferase compare
SMc00711 -3.2 -4.6 cyclohexadienyl dehydrogenase compare
SMc00414 -3.2 -11.5 hypothetical protein compare
SMc02115 -3.1 -1.6 hypothetical protein compare
SMc00334 -3.1 -3.0 cytidylate kinase compare
SM_b21376 -3.1 -7.8 sugar uptake ABC transporter ATP-binding protein compare
SMc02838 -2.9 -7.9 phosphoglyceromutase compare
SM_b21375 -2.7 -6.3 sugar uptake ABC transporter permease compare
SMc01430 -2.7 -8.2 acetolactate synthase 3 regulatory subunit compare
SMc01850 -2.6 -5.0 hypothetical protein compare
SMc03069 -2.6 -3.3 6-phosphogluconolactonase compare
SMc00302 -2.6 -5.0 hypothetical protein compare
SMc01207 -2.5 -3.5 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02141 -2.5 -5.6 phosphate transporter PhoU compare
SMc01124 -2.4 -7.7 PII uridylyl-transferase compare
SMc02724 -2.4 -3.9 hypothetical protein compare
SMc01441 -2.4 -8.6 membrane bound protease compare
SMc03153 -2.4 -5.8 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc02147 -2.3 -8.4 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02140 -2.3 -3.3 phosphate regulon transcriptional regulatory protein compare
SMc02055 -2.2 -2.4 phytoene synthase compare
SMc01852 -2.1 -12.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02833 -2.1 -2.6 penicillin-insensitive murein endopeptidase compare
SMc03924 -2.1 -10.2 glycogen synthase compare
SMc01440 -2.1 -5.6 hydrolase serine protease transmembrane protein compare
SMc01147 -2.0 -4.5 coproporphyrinogen III oxidase compare
SMc01368 -2.0 -6.4 transport transmembrane protein compare
SMc02641 -1.7 -5.1 UDP-glucose 6-dehydrogenase compare
SMc04348 -1.7 -1.9 transcriptional regulator compare
SMc00450 -1.6 -3.0 protoheme IX farnesyltransferase compare
SMc01187 -1.6 -3.3 rare lipoprotein A compare
SMc02753 -1.5 -2.0 PTS system transporter subunit IIA compare
SMc00726 -1.5 -1.2 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02164 -1.5 -3.6 fructokinase compare
SMc00761 -1.5 -8.7 oxidoreductase compare
SMc00838 -1.4 -6.9 hypothetical protein compare
SMc02640 -1.4 -4.9 UDP-glucuronic acid epimerase compare
SMc04233 -1.3 -4.0 hypothetical protein compare
SMc00762 -1.3 -7.6 glutamine synthetase compare
SMc00982 -1.3 -6.0 dioxygenase compare
SMc03980 -1.3 -3.8 hypothetical protein compare
SMc00361 -1.3 -3.0 hypothetical protein compare
SMc00619 -1.3 -1.7 hypothetical protein compare
SMc04000 -1.2 -0.9 hypothetical protein compare
SMc01043 -1.2 -6.0 nitrogen assimilation regulatory protein compare
SMc00053 -1.2 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc02058 -1.2 -2.8 YAJC protein compare
SMc00622 -1.2 -6.0 ribonuclease D protein compare
SMc00709 -1.1 -3.6 hypothetical protein compare
SMc02856 -1.1 -7.2 penicillin-binding protein compare
SMc00514 -1.1 -3.4 monooxygenase compare
SMc02425 -1.1 -3.2 transcriptional regulator compare
SMc02985 -1.1 -7.7 hypothetical protein compare
SMc02543 -1.1 -4.3 hypothetical protein compare
SMc02713 -1.1 -2.1 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc00295 -1.1 -0.9 hypothetical protein compare
SMc00580 -1.1 -3.1 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc00802 -1.0 -0.8 hypothetical protein compare
SMc04296 -1.0 -0.9 cell division protein FtsZ compare
SMc00579 -1.0 -3.1 dimethyladenosine transferase compare
SM_b20948 -1.0 -1.5 glucosyltransferase compare
SMc00691 -1.0 -4.4 site-specific tyrosine recombinase XerD compare
SMc02032 -1.0 -2.8 ABC transporter ATP-binding protein compare
SM_b20955 -1.0 -4.4 endo-beta-1,3-1,4-glycanase compare
SMa1174 -1.0 -2.1 hypothetical protein compare
SMc00492 -1.0 -1.0 hypothetical protein compare
SMc00914 -1.0 -2.9 oxidoreductase compare
SMc04243 -1.0 -4.1 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc02451 -1.0 -1.9 hypothetical protein compare
SMa1101 -1.0 -1.4 hypothetical protein compare
SMc04319 -1.0 -1.3 hypothetical protein compare
SMc00296 -0.9 -5.6 POLY3-hydroxybutyrate polymerase compare
SMa1201 -0.9 -2.0 hypothetical protein compare
SMc02142 -0.9 -4.6 phosphate transporter ATP-binding protein compare
SMc00712 -0.9 -1.8 hypothetical protein compare
SMc00288 -0.9 -5.8 signal peptide protein compare
SMa1570 -0.9 -1.1 PilA2 pilus assembly protein compare
SMc04042 -0.9 -4.3 monophosphatase compare
SMc02227 -0.9 -4.8 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc02232 -0.9 -2.0 hypothetical protein compare
SMc00689 -0.9 -3.5 lipoprotein compare
SMc00821 -0.9 -1.7 hypothetical protein compare
SMc01472 -0.9 -0.9 50S ribosomal protein L11 methyltransferase compare
SMc01208 -0.9 -2.7 peptidyl-prolyl cis-trans isomerase B protein compare
SMc01842 -0.9 -0.9 methyltransferase transcription regulator protein compare
SMc00060 -0.9 -5.8 hypothetical protein compare
SMc02143 -0.9 -2.7 phosphate ABC transporter permease compare
SMc03878 -0.8 -2.1 acetoacetyl-CoA reductase compare
SMc02144 -0.8 -2.5 phosphate ABC transporter permease compare
SMc01041 -0.8 -2.0 NIFR3-like protein compare
SMc00353 -0.8 -2.0 transmembrane protein compare
SMc02084 -0.8 -1.1 biopolymer transport transmembrane protein compare
SMc02228 -0.8 -4.0 acetyl-CoA acetyltransferase compare
SMc00710 -0.8 -4.1 histidinol-phosphate aminotransferase compare
SMc00981 -0.8 -4.5 ferredoxin protein compare
SMc02778 -0.8 -0.8 hydroxyacid aldolase compare
SMc00352 -0.8 -1.4 acetyltransferase compare
SMc00012 -0.8 -1.1 cytochrome C oxidase assembly protein compare
SMa0789 -0.8 -3.1 GntR family transcriptional regulator compare
SMc04359 -0.8 -3.7 transmembrane protein compare
SMc01342 -0.8 -2.9 hypothetical protein compare
SMc01438 -0.8 -2.5 protease precursor signal peptide protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-(-)-tagatose in Sinorhizobium meliloti 1021

For carbon source D-(-)-tagatose across organisms