Experiment set1IT034 for Sinorhizobium meliloti 1021

Compare to:

Beta-Lactose carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc03060 +5.5 43.1 transcriptional regulator compare
SMc04260 +5.4 41.1 transcriptional regulator compare
SM_b21650 +2.8 21.4 LacI family transcriptional regulator compare
SMc03798 +2.0 13.2 aldose 1-epimerase compare
SMc00588 +2.0 4.9 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc02835 +1.8 10.7 glucokinase compare
SM_b21222 +1.1 6.6 transcriptional regulator compare
SMa0734 +1.0 2.0 hypothetical protein compare
SM_b20320 +0.9 1.9 TRAP-type large permease component compare
SMc02247 +0.9 1.9 signal peptide protein compare
SMc00404 +0.9 1.4 hypothetical protein compare
SMa1921 +0.9 2.8 hypothetical protein compare
SM_b21669 +0.9 1.6 hypothetical protein compare
SMc03899 +0.9 1.3 hypothetical protein compare
SMc00883 +0.8 6.0 L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) (from data) compare
SMc04232 +0.8 1.6 glycine rich transmembrane protein compare
SM_b20026 +0.8 1.9 hypothetical protein compare
SMc00877 +0.8 5.1 transcriptional regulator compare
SMc03924 +0.7 5.6 glycogen synthase compare
SMc01099 +0.7 1.8 tRNA pseudouridine synthase A compare
SM_b20725 +0.7 1.7 hypothetical protein compare
SMc03066 +0.7 1.7 hypothetical protein compare
SMc01427 +0.7 1.6 hypothetical protein compare
SMc00030 +0.7 2.6 hypothetical protein compare
SMc03999 +0.7 3.0 hypothetical protein compare
SMc02510 +0.7 0.8 ferric uptake regulation protein compare
SMc04236 +0.7 2.2 glycine-rich cell wall structural transmembrane protein compare
SMc03880 +0.7 5.1 hypothetical protein compare
SMc00566 +0.7 2.5 hypothetical protein compare
SM_b21049 +0.7 2.0 hypothetical protein compare
SMa2303 +0.6 5.1 ROK family transcriptional regulator compare
SMc02151 +0.6 1.8 hypothetical protein compare
SMc02906 +0.6 0.7 hypothetical protein compare
SMa0126 +0.6 0.8 CspA8 Cold shock family protein compare
SMc00878 +0.6 5.3 transcriptional regulator compare
SMa0748 +0.6 1.8 MucR family transcriptional regulator compare
SMc01419 +0.6 1.6 RNA polymerase sigma factor protein compare
SMc03836 +0.6 1.4 acyl-CoA thioesterase i protein compare
SMc01660 +0.6 1.8 hypothetical protein compare
SM_b20413 +0.6 1.0 hypothetical protein compare
SMc04242 +0.6 0.8 zinc uptake regulation protein compare
SMc01701 +0.6 1.5 hypothetical protein compare
SMc03128 +0.6 2.2 ABC transporter permease compare
SMc04385 +0.6 2.4 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00804 +0.6 1.6 hypothetical protein compare
SMc02095 +0.5 3.8 hypothetical protein compare
SMc02544 +0.5 0.7 hypothetical protein compare
SMc00347 +0.5 2.3 nucleoside diphosphate kinase regulator compare
SMc02338 +0.5 1.4 periplasmic binding ABC transporter protein compare
SM_b21643 +0.5 3.8 alpha-galactosidase (melibiase) protein compare
SMc01153 +0.5 0.9 enoyl-CoA hydratase compare
SMc02504 +0.5 2.8 transcriptional regulator compare
SMa1544 +0.5 2.4 NuoK2 NADH:quinone oxidoreductase subunit 11 (chain K) compare
SMa0674 +0.5 1.0 hypothetical protein compare
SM_b20246 +0.5 2.5 oxidoreductase compare
SM_b20553 +0.5 2.0 hypothetical protein compare
SMc03037 +0.5 2.3 flagellin A compare
SMc01757 +0.5 1.5 hypothetical protein compare
SM_b20519 +0.5 2.0 hypothetical protein compare
SMc01024 +0.5 1.0 preprotein translocase subunit SecG compare
SMc04359 +0.5 3.5 transmembrane protein compare
SMc04436 +0.5 1.7 hypothetical protein compare
SMc03159 +0.5 1.6 ABC transporter ATP-binding protein compare
SMa0543 +0.5 0.8 hypothetical protein compare
SM_b20011 +0.5 2.3 hypothetical protein compare
SMa0663 +0.5 2.8 hypothetical protein compare
SMc02318 +0.5 1.4 hypothetical protein compare
SMc02366 +0.5 4.1 transcriptional regulator compare
SM_b21485 +0.5 2.1 hypothetical protein compare
SMc04352 +0.5 2.2 signal peptide protein compare
SM_b20952 +0.5 2.7 hypothetical protein compare
SMa1046 +0.5 2.9 adenylate cyclase compare
SMc02367 +0.5 3.2 sensor histidine kinase transmembrane protein compare
SMc00351 +0.5 0.7 hypothetical protein compare
SMa5023 +0.5 2.1 hypothetical protein compare
SMc04452 +0.5 2.3 NADH dehydrogenase transmembrane protein compare
SMa1111 +0.5 1.7 hypothetical protein compare
SMc02716 +0.5 1.2 hypothetical protein compare
SMc04362 +0.5 3.4 transporter compare
SMa0740 +0.5 1.4 hypothetical protein compare
SMc02174 +0.5 2.4 hypothetical protein compare
SMc02844 +0.5 0.9 transcriptional regulator compare
SMc03801 +0.5 1.7 thioredoxin protein compare
SMc02373 +0.5 0.7 hypothetical protein compare
SMc00458 +0.4 4.0 transcriptional regulator compare
SMc00800 +0.4 0.7 hypothetical protein compare
SMa0508 +0.4 2.0 ABC transporter ATP-binding protein compare
SMa1323 +0.4 1.7 Transcription regulator compare
SMc01777 +0.4 2.5 6,7-dimethyl-8-ribityllumazine synthase compare
SMc04094 +0.4 1.2 hypothetical protein compare
SMc00029 +0.4 1.5 hypothetical protein compare
SMc01410 +0.4 1.3 lipoprotein transmembrane compare
SMc03930 +0.4 0.7 sarcosine oxidase subunit gamma compare
SM_b20724 +0.4 2.1 hypothetical protein compare
SM_b20920 +0.4 1.5 hypothetical protein compare
SMc01418 +0.4 1.3 signal peptide protein compare
SMa2389 +0.4 1.6 OsmC-like protein compare
SMc04357 +0.4 1.2 hypothetical protein compare
SM_b20626 +0.4 1.9 AraC family transcriptional regulator compare
SMc01799 +0.4 1.7 signal peptide protein compare
SMc04341 +0.4 2.7 amino acid-binding periplasmic protein compare
SMa0286 +0.4 1.4 hypothetical protein compare
SMc01556 +0.4 1.6 hypothetical protein compare
SMc01127 +0.4 1.6 hypothetical protein compare
SMa0645 +0.4 1.0 hypothetical protein compare
SMa0412 +0.4 1.8 hypothetical protein compare
SMc01149 +0.4 1.9 hypothetical protein compare
SMa0754 +0.4 0.9 hypothetical protein compare
SM_b20692 +0.4 1.3 5-keto-D-gluconate 5-reductase compare
SMa2231 +0.4 1.2 hypothetical protein compare
SMa2141 +0.4 1.3 formyltetrahydrofolate deformylase compare
SMa1136 +0.4 1.5 hypothetical protein compare
SMa1365 +0.4 0.9 ATP-binding protein compare
SMc04351 +0.4 2.8 transmembrane ATP-binding ABC transporter protein compare
SMc00976 +0.4 0.8 enoyl-CoA hydratase compare
SM_b20141 +0.4 2.3 oligopeptide ABC transporter ATP-binding protein compare
SMc02389 +0.4 2.8 hypothetical protein compare
SMc02503 +0.4 2.3 hypothetical protein compare
SM_b20667 +0.4 2.1 LacI family transcriptional regulator compare
SMc03250 +0.4 1.7 hypothetical protein compare
SMc02287 +0.4 1.5 DNA-invertase compare
SMc04029 +0.4 1.9 low specificity L-threonine aldolase compare
SM_b20373 +0.4 1.7 TRAP dicarboxylate transporter compare
SMa1658 +0.4 1.0 hypothetical protein compare
SM_b20987 +0.4 1.2 siroheme synthase compare
SMc00970 +0.4 1.4 exodeoxyribonuclease VII small subunit compare
SM_b21401 +0.4 1.6 hypothetical protein compare
SMa0643 +0.4 0.8 transposase compare
SMa1688 +0.4 1.8 Two-component response regulator compare
SM_b21170 +0.4 1.6 guanylate kinase compare
SMc04360 +0.4 1.9 hypothetical protein compare
SMc00565 +0.4 0.5 50S ribosomal protein L9 compare
SM_b21280 +0.4 1.6 phosphoribosyltransferase compare
SM_b21580 +0.4 0.6 hypothetical protein compare
SM_b21171 +0.4 2.2 enzyme protein compare
SMa1176 +0.4 1.3 hypothetical protein compare
SMa1100 +0.4 1.8 hypothetical protein compare
SMa0349 +0.4 0.9 hypothetical protein compare
SMc01810 +0.4 1.7 hypothetical protein compare
SMc02720 +0.4 1.6 ATP-dependent Clp protease proteolytic subunit compare
SMc01698 +0.4 1.7 oxidoreductase compare
SMc04265 +0.4 2.0 hypothetical protein compare
SM_b20131 +0.4 1.1 oxidoreductase compare
SMc02565 +0.4 2.5 hypothetical protein compare
SMc02886 +0.4 0.8 signal peptide protein compare
SMa1960 +0.4 1.5 hypothetical protein compare
SM_b21487 +0.4 2.6 cytochrome o ubiquinol oxidase subunit II compare
SM_b21149 +0.4 2.2 sugar uptake ABC transporter permease compare
SM_b20375 +0.4 1.1 transcriptional regulator compare
SMa1210 +0.4 1.1 nitrogen fixation protein FixH compare
SMc00593 +0.4 1.8 hypothetical protein compare
SMc03132 +0.4 2.4 oxidoreductase compare
SMc00831 +0.4 1.3 transcriptional regulator compare
SM_b20082 +0.4 1.0 hypothetical protein compare
SMa2265 +0.4 2.1 hypothetical protein compare
SM_b21025 +0.4 1.8 hypothetical protein compare
SMc00718 +0.4 1.4 hypothetical protein compare
SMc03165 +0.4 2.1 Novel Xylose regulator from LacI family (from data) compare
SMc02709 +0.4 1.4 hypothetical protein compare
SM_b20722 +0.3 1.8 two-component response regulator protein compare
SM_b20701 +0.3 0.5 hypothetical protein compare
SMc00719 +0.3 1.3 hypoxanthine-guanine phosphoribosyltransferase compare
SMa0113 +0.3 3.1 Sensor histidine kinase compare
SMa1968 +0.3 1.8 amidotransferase compare
SMc00239 +0.3 0.5 hypothetical protein compare
SMa0121 +0.3 1.2 hypothetical protein compare
SMc01808 +0.3 1.0 hypothetical protein compare
SM_b21439 +0.3 1.6 translation initiation inhibitor protein compare
SMc01315 +0.3 0.6 hypothetical protein compare
SMc04167 +0.3 1.8 histidine-rich transporter transmembrane protein compare
SM_b20806 +0.3 1.5 hypothetical protein compare
SM_b20392 +0.3 1.5 transcriptional regulator NanR compare
SMc02843 +0.3 1.8 endonuclease III protein compare
SMc02617 +0.3 1.1 hypothetical protein compare
SMc04453 +0.3 0.6 hypothetical protein compare
SMa0631 +0.3 2.3 hypothetical protein compare
SMc03922 +0.3 2.9 glycogen branching protein compare
SMc01825 +0.3 2.3 ABC transporter permease compare
SM_b21350 +0.3 1.3 GntR family transcriptional regulator compare
SMa2095 +0.3 1.4 hypothetical protein compare
SMa1471 +0.3 2.1 hypothetical protein compare
SMc01456 +0.3 1.5 hypothetical protein compare
SMc03068 +0.3 2.8 phosphogluconate dehydratase compare
SMc04237 +0.3 1.4 hypothetical protein compare
SM_b20093 +0.3 1.4 hypothetical protein compare
SM_b21509 +0.3 0.4 plasmid stability protein compare
SMc02639 +0.3 0.8 transcriptional regulator compare
SMc02719 +0.3 0.5 transposase compare
SMc00879 +0.3 1.6 transcriptional regulator compare
SMa0947 +0.3 1.3 hypothetical protein compare
SM_b20622 +0.3 2.1 sugar uptake ABC transporter ATP-binding protein compare
SMa1126 +0.3 1.9 Protease compare
SM_b20679 +0.3 1.7 tartronate semialdehyde reductase compare
SM_b20130 +0.3 1.8 dehydrogenase compare
SM_b21436 +0.3 1.6 C4-dicarboxylate transport system, permease large protein transmembrane compare
SM_b20527 +0.3 1.2 hypothetical protein compare
SMc01256 +0.3 2.7 L-serine dehydratase compare
SM_b20655 +0.3 0.6 hypothetical protein compare
SM_b20728 +0.3 1.2 hypothetical protein compare
SM_b20390 +0.3 1.7 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Beta-Lactose in Sinorhizobium meliloti 1021

For carbon source Beta-Lactose across organisms