Experiment set1IT033 for Sinorhizobium meliloti 1021

Compare to:

D-Salicin carbon source

200 most important genes:

  gene name fitness t score description  
SMc02899 -8.7 -6.0 prephenate dehydratase compare
SMc01726 -8.7 -6.0 acetylglutamate kinase compare
SMc01843 -8.4 -8.1 5,10-methylenetetrahydrofolate reductase compare
SMc00235 -8.1 -5.6 anthranilate phosphoribosyltransferase compare
SMc00236 -8.0 -5.5 Indole-3-glycerol phosphate synthase compare
SMc00917 -7.9 -5.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02766 -7.9 -14.2 tryptophan synthase subunit beta compare
SMc02569 -7.8 -5.4 imidazole glycerol phosphate synthase subunit HisF compare
SMc01801 -7.7 -5.2 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02717 -7.6 -7.4 2-isopropylmalate synthase compare
SMc03797 -7.5 -10.3 homoserine O-succinyltransferase compare
SMc01431 -7.4 -8.8 acetolactate synthase 3 catalytic subunit compare
SMc03777 -7.3 -5.1 gamma-glutamyl phosphate reductase compare
SMc00493 -7.2 -5.0 phosphoribosylformylglycinamidine synthase I compare
SMc04405 -7.2 -9.9 3-isopropylmalate dehydrogenase compare
SMc04045 -7.2 -7.0 dihydroxy-acid dehydratase compare
SMc00614 -7.1 -7.0 phosphoribosylglycinamide formyltransferase compare
SMc00918 -7.1 -8.5 ATP phosphoribosyltransferase regulatory subunit compare
SMc04028 -7.0 -15.7 glutamate synthase compare
SMc03895 -7.0 -15.6 pyruvate carboxylase compare
SMc00640 -6.9 -10.5 phosphoserine aminotransferase compare
SMc00711 -6.8 -6.5 cyclohexadienyl dehydrogenase compare
SMc02767 -6.7 -9.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00554 -6.7 -6.5 amidophosphoribosyltransferase compare
SMc04002 -6.6 -6.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00488 -6.6 -19.0 phosphoribosylformylglycinamidine synthase II compare
SMa1635 -6.5 -2.6 hypothetical protein compare
SMc03776 -6.5 -4.5 gamma-glutamyl kinase compare
SMc00993 -6.4 -9.8 phosphoribosylamine--glycine ligase compare
SMc02217 -6.4 -7.6 O-succinylhomoserine sulfhydrylase compare
SMc00495 -6.4 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02245 -6.4 -7.6 dihydroorotate dehydrogenase 2 compare
SMc02137 -6.3 -6.2 ornithine carbamoyltransferase compare
SMc03112 -6.3 -18.6 B12-dependent methionine synthase compare
SMc00293 -6.3 -13.1 homoserine dehydrogenase compare
SMc02765 -6.3 -10.9 tryptophan synthase subunit alpha compare
SMc03826 -6.1 -4.2 argininosuccinate synthase compare
SMc02725 -6.1 -14.1 anthranilate synthase compare
SMc02572 -6.1 -4.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc03823 -6.0 -12.8 isopropylmalate isomerase large subunit compare
SMc01494 -6.0 -7.2 phosphoserine phosphatase compare
SMc00615 -5.9 -8.0 phosphoribosylaminoimidazole synthetase compare
SMc01004 -5.9 -7.9 phosphoribosyl-AMP cyclohydrolase compare
SMc00412 -5.9 -5.7 orotidine 5'-phosphate decarboxylase compare
SMc00815 -5.6 -3.7 inosine 5'-monophosphate dehydrogenase compare
SMc01360 -5.6 -5.4 aspartate carbamoyltransferase catalytic subunit compare
SMc02123 -5.5 -4.9 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc04026 -5.5 -6.8 glutamate synthase compare
SMc02755 -5.5 -6.5 S-adenosyl-L-homocysteine hydrolase compare
SMc03979 -5.3 -3.7 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02570 -5.3 -5.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00982 -5.1 -8.6 dioxygenase compare
SMc02165 -5.1 -8.8 orotate phosphoribosyltransferase compare
SMc02425 -5.1 -4.4 transcriptional regulator compare
SMc03763 -5.0 -3.5 cytosine-specific methyltransferase compare
SMc04088 -4.9 -7.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02166 -4.9 -11.1 dihydroorotase compare
SMc01215 -4.8 -3.3 carbamoyl phosphate synthase large subunit compare
SMc02124 -4.8 -18.1 nitrite reductase compare
SMc01569 -4.8 -2.6 carbamoyl phosphate synthase small subunit compare
SMc02307 -4.8 -9.2 histidinol dehydrogenase compare
SMc01361 -4.8 -5.9 dihydroorotase compare
SMc03070 -4.7 -9.1 glucose-6-phosphate 1-dehydrogenase compare
SMc01880 -4.7 -4.6 pantoate--beta-alanine ligase compare
SMc04001 -4.6 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01770 -4.4 -2.0 serine hydroxymethyltransferase compare
SMc00876 -4.4 -7.9 ATP-binding MRP protein compare
SMc00131 -4.4 -14.0 transcriptional regulator compare
SMc00017 -4.3 -2.3 homoserine kinase compare
SMc03978 -4.3 -4.2 transketolase compare
SMc02246 -4.3 -1.7 hypothetical protein compare
SMc03795 -4.3 -2.3 isopropylmalate isomerase small subunit compare
SMc04253 -4.2 -16.7 oxidoreductase compare
SMc04259 -4.2 -6.9 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc00981 -4.1 -9.3 ferredoxin protein compare
SMc00090 -4.0 -10.4 sulfate adenylyltransferase compare
SMc00092 -4.0 -10.4 phosphoadenosine phosphosulfate reductase compare
SMc04256 -3.9 -13.0 ABC transporter for D-Cellobiose and D-Salicin, ATPase component (from data) compare
SMc01054 -3.9 -4.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc01881 -3.9 -3.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc04258 -3.9 -10.7 ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) compare
SM_b21177 -3.9 -10.2 phosphate uptake ABC transporter ATP-binding protein compare
SMc00294 -3.8 -10.7 aminotransferase compare
SMc00494 -3.8 -3.0 phosphoribosylformylglycinamidine synthase subunit PurS compare
SM_b21175 -3.7 -7.3 phosphate uptake ABC transporter permease compare
SMc04346 -3.7 -4.5 ketol-acid reductoisomerase compare
SMc03161 -3.7 -14.6 oxidoreductase compare
SMa0882 -3.6 -1.8 hypothetical protein compare
SMc02138 -3.6 -5.2 acetylornithine transaminase compare
SMc04257 -3.6 -14.0 ABC transporter for D-Cellobiose and D-Salicin, permease component 1 (from data) compare
SMc02707 -3.5 -4.6 hypothetical protein compare
SMc00641 -3.2 -4.0 D-3-phosphoglycerate dehydrogenase compare
SMc01430 -3.2 -5.9 acetolactate synthase 3 regulatory subunit compare
SM_b21176 -3.1 -4.7 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc04255 -3.1 -12.8 beta-mannosidase compare
SMc00091 -3.1 -11.2 sulfate adenylyltransferase compare
SMc00963 -2.9 -4.3 hypothetical protein compare
SMc01053 -2.9 -5.2 siroheme synthase compare
SM_b21174 -2.9 -7.1 phosphate uptake ABC transporter permease compare
SMc03974 -2.8 -4.7 hypothetical protein compare
SMc04005 -2.6 -10.1 pyruvate kinase compare
SMc04254 -2.6 -2.9 hypothetical protein compare
SMc00451 -2.4 -10.8 processing protease compare
SMc03981 -2.2 -2.9 phosphoglycerate kinase compare
SMc02172 -2.2 -7.6 transcriptional regulator compare
SMc02835 -2.2 -9.4 glucokinase compare
SMc03162 -2.1 -7.4 3-ketoglucose dehydratase (from data) compare
SMc00450 -2.1 -3.2 protoheme IX farnesyltransferase compare
SMc00726 -2.0 -1.3 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02640 -1.9 -6.0 UDP-glucuronic acid epimerase compare
SMc01124 -1.9 -6.7 PII uridylyl-transferase compare
SMc01207 -1.9 -3.3 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00656 -1.8 -1.6 hypothetical protein compare
SMc02641 -1.8 -5.1 UDP-glucose 6-dehydrogenase compare
SMc02141 -1.7 -4.1 phosphate transporter PhoU compare
SMc02434 -1.7 -3.1 hypothetical protein compare
SMc01206 -1.6 -2.0 queuine tRNA-ribosyltransferase compare
SMc00295 -1.6 -1.8 hypothetical protein compare
SMc01578 -1.6 -10.9 aspartate aminotransferase compare
SMc00414 -1.6 -8.4 hypothetical protein compare
SMa0789 -1.5 -4.8 GntR family transcriptional regulator compare
SMa2020 -1.5 -4.8 Transcriptional regulator compare
SMc00838 -1.4 -3.8 hypothetical protein compare
SMc01028 -1.4 -9.6 phosphopyruvate hydratase compare
SMc02685 -1.4 -3.2 hypothetical protein compare
SMc02983 -1.4 -5.7 ornithine, DAP, or arginine decarboxylase compare
SMc03839 -1.3 -1.5 hypothetical protein compare
SMc00709 -1.3 -4.8 hypothetical protein compare
SMc02140 -1.3 -2.4 phosphate regulon transcriptional regulatory protein compare
SM_b20270 -1.3 -2.4 proline racemase compare
SMc01842 -1.3 -1.2 methyltransferase transcription regulator protein compare
SMc02838 -1.3 -5.8 phosphoglyceromutase compare
SMc03100 -1.3 -1.0 hypothetical protein compare
SMc01845 -1.2 -2.0 transglycosylase transmembrane protein compare
SMc03924 -1.2 -5.7 glycogen synthase compare
SMc03229 -1.2 -2.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b20313 -1.2 -3.8 glycerone kinase compare
SMc02363 -1.2 -2.9 cytochrome C-type biogenesis transmembrane protein compare
SMc02833 -1.1 -1.8 penicillin-insensitive murein endopeptidase compare
SMc02147 -1.1 -5.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc04093 -1.1 -8.4 acetyl-CoA synthetase compare
SMc02866 -1.1 -3.1 transcriptional regulator compare
SMc03850 -1.1 -1.3 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02384 -1.1 -5.6 glycosyltransferase transmembrane protein compare
SMc02164 -1.1 -2.1 fructokinase compare
SMc02574 -1.1 -2.3 imidazoleglycerol-phosphate dehydratase compare
SMc02694 -1.1 -1.6 ATP-dependent Clp protease adaptor compare
SMa0717 -1.1 -7.1 hypothetical protein compare
SMc01800 -1.1 -1.5 cytochrome C oxidase assembly transmembrane protein compare
SMc01260 -1.1 -4.6 transcriptional regulator compare
SMc01337 -1.1 -1.6 hypothetical protein compare
SMc00419 -1.1 -3.2 glutathione synthetase compare
SMc00492 -1.1 -1.0 hypothetical protein compare
SM_b20773 -1.0 -3.6 GntR family transcriptional regulator compare
SMc04296 -1.0 -1.0 cell division protein FtsZ compare
SMc03993 -1.0 -5.5 hypothetical protein compare
SMc02058 -1.0 -2.7 YAJC protein compare
SMc01495 -1.0 -2.7 transcriptional regulator compare
SM_b20823 -1.0 -5.7 cell surface saccharide synthesis protein compare
SM_b21551 -1.0 -1.2 hypothetical protein compare
SMc04330 -1.0 -1.9 trimethylamine methyltransferase compare
SMc02225 -1.0 -3.3 hypothetical protein compare
SMc02385 -1.0 -2.5 hypothetical protein compare
SM_b20148 -1.0 -3.5 transcriptional regulator compare
SMc02521 -1.0 -2.6 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc03878 -1.0 -2.0 acetoacetyl-CoA reductase compare
SMa1924 -1.0 -0.9 hypothetical protein compare
SMc00329 -1.0 -2.6 iron response regulator protein compare
SM_b21270 -1.0 -2.5 transcriptional regulator compare
SMc02753 -1.0 -1.4 PTS system transporter subunit IIA compare
SMc02690 -1.0 -3.8 hypothetical protein compare
SMc03069 -1.0 -2.5 6-phosphogluconolactonase compare
SMc02677 -1.0 -4.1 pyrroline-5-carboxylate reductase compare
SMc03068 -1.0 -5.0 phosphogluconate dehydratase compare
SMc02055 -0.9 -1.6 phytoene synthase compare
SMc01622 -0.9 -5.1 oxidoreductase compare
SMc03140 -0.9 -3.2 transcriptional regulator compare
SMc02904 -0.9 -2.4 hypothetical protein compare
SMc00013 -0.9 -2.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc01183 -0.9 -1.5 LexA repressor compare
SMa1296 -0.9 -5.8 alcohol dehydrogenase compare
SMc02793 -0.9 -4.8 hypothetical protein compare
SMc02308 -0.9 -2.4 hypothetical protein compare
SMc00579 -0.9 -2.4 dimethyladenosine transferase compare
SMc02227 -0.9 -4.3 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc03258 -0.9 -5.5 transcriptional regulator compare
SM_b20105 -0.9 -1.5 transcriptional regulator compare
SMa1442 -0.9 -3.7 GntR family transcriptional regulator compare
SMc03051 -0.9 -2.8 flagellar biosynthesis repressor FlbT compare
SM_b21524 -0.9 -2.2 septum formation inhibitor compare
SMc00067 -0.8 -4.8 outer-membranne lipoprotein compare
SMc04000 -0.8 -0.6 hypothetical protein compare
SMc05009 -0.8 -2.2 nodulation protein NolR compare
SMc04348 -0.8 -0.9 transcriptional regulator compare
SMc02435 -0.8 -1.5 methyltransferase compare
SMc02407 -0.8 -4.4 hypothetical protein compare
SMc01441 -0.8 -3.3 membrane bound protease compare
SMc00010 -0.8 -1.3 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03242 -0.8 -2.2 GTP-binding protein compare
SMc01501 -0.8 -1.3 mannitol 2-dehydrogenase compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source D-Salicin in Sinorhizobium meliloti 1021

For carbon source D-Salicin across organisms