Experiment set1IT033 for Caulobacter crescentus NA1000

Compare to:

Beta-Lactose carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01851 +3.8 28.7 quinol cytochrome oxidase polypeptide II compare
CCNA_01848 +3.7 20.3 quinol cytochrome oxidase polypeptide IV compare
CCNA_00769 +3.6 14.0 TetR family transcriptional regulator compare
CCNA_03280 +3.5 26.4 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02026 +3.5 15.3 hypothetical protein compare
CCNA_02028 +3.4 4.7 NTF2 superfamily protein compare
CCNA_01849 +3.4 16.6 quinol cytochrome oxidase polypeptide III compare
CCNA_01850 +3.3 22.6 quinol cytochrome oxidase polypeptide I compare
CCNA_00264 +3.3 20.8 C4-dicarboxylate transport protein compare
CCNA_02030 +3.3 8.8 hypothetical protein compare
CCNA_00699 +3.2 11.7 LSU ribosomal protein L28P compare
CCNA_01593 +3.0 17.3 Xaa-pro aminopeptidase compare
CCNA_02021 +3.0 10.3 hypothetical protein compare
CCNA_03524 +3.0 16.2 di-/tripeptide transporter compare
CCNA_01712 +3.0 22.2 CopY/TcrY family transcriptional repressor compare
CCNA_01684 +3.0 13.2 phenylalanine-4-hydroxylase compare
CCNA_01840 +2.9 23.9 MerR-family transcriptional regulator compare
CCNA_03936 +2.9 5.1 hypothetical protein compare
CCNA_02957 +2.9 9.0 ArsR-family transcriptional regulator compare
CCNA_R0037 +2.8 10.3 tRNA-Glu compare
CCNA_00518 +2.8 13.1 LSU ribosomal protein L25P compare
CCNA_03961 +2.7 8.5 hypothetical protein compare
CCNA_01780 +2.7 18.7 exopolyphosphatase compare
CCNA_01573 +2.7 13.8 ArsR-family transcriptional regulator compare
CCNA_01801 +2.7 12.4 hypothetical protein compare
CCNA_01453 +2.7 6.4 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01979 +2.7 6.9 LexA repressor compare
CCNA_03012 +2.6 13.7 peroxiredoxin compare
CCNA_02447 +2.6 15.5 PspA/IM30 family regulatory protein compare
CCNA_01526 +2.6 8.9 flagellar biosynthesis regulatory protein flaF compare
CCNA_03951 +2.6 12.5 hypothetical protein compare
CCNA_02025 +2.6 5.8 hypothetical protein compare
CCNA_03271 +2.6 16.5 methionine gamma-lyase compare
CCNA_03064 +2.6 13.2 PadR-family transcriptional regulator compare
CCNA_02980 +2.6 15.7 tryptophan 2,3-dioxygenase compare
CCNA_02646 +2.6 4.7 cell division protein MraZ compare
CCNA_00161 +2.6 16.9 hypothetical protein compare
CCNA_02103 +2.5 14.3 hypothetical protein compare
CCNA_00846 +2.5 20.1 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_01094 +2.5 5.1 hypothetical protein compare
CCNA_00939 +2.5 8.6 MarR-family transcriptional regulator compare
CCNA_01847 +2.5 15.7 cytochrome c oxidase assembly protein Surf1 compare
CCNA_02448 +2.5 13.9 hypothetical protein compare
CCNA_03612 +2.5 11.8 HTH XRE-family transcriptional regulator compare
CCNA_00296 +2.5 15.3 phosphate regulon response regulator PhoB compare
CCNA_01931 +2.5 13.4 TetR-family transcriptional regulator compare
CCNA_01420 +2.4 15.3 NrdR family transcriptional regulator compare
CCNA_03289 +2.4 12.4 HicB-family RNA-binding protein compare
CCNA_01913 +2.4 14.0 MarR-family transcriptional regulator compare
CCNA_02066 +2.4 12.2 phytoene/squalene synthase family protein compare
CCNA_01525 +2.4 11.0 flagellar biosynthesis repressor flbT compare
CCNA_01964 +2.4 8.7 NADH dehydrogenase compare
CCNA_02619 +2.4 18.7 stomatin/prohibitin-related protein compare
CCNA_03252 +2.4 17.0 CopY/TcrY-family transcriptional regulator compare
CCNA_02000 +2.4 1.9 SSU ribosomal protein S2P compare
CCNA_01742 +2.4 9.4 hypothetical protein compare
CCNA_03287 +2.4 11.8 PadR-family transcriptional regulator compare
CCNA_03824 +2.4 15.3 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_00028 +2.4 8.1 TonB-dependent receptor compare
CCNA_01790 +2.4 8.1 protein translocase subunit secG compare
CCNA_02617 +2.3 16.1 histidinol-phosphate aminotransferase compare
CCNA_03043 +2.3 6.8 type IV pilin protein pilA compare
CCNA_03989 +2.3 16.0 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01804 +2.3 12.7 glutathione peroxidase compare
CCNA_03123 +2.3 13.8 ArsR-family transcriptional regulator compare
CCNA_00527 +2.3 11.2 hypothetical protein compare
CCNA_03689 +2.3 14.5 alanine dehydrogenase compare
CCNA_01528 +2.2 11.9 flagellin fljK compare
CCNA_01059 +2.2 18.3 S-layer protein rsaA compare
CCNA_00847 +2.2 10.2 leucine-responsive regulatory protein compare
CCNA_01655 +2.2 9.9 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_03325 +2.2 7.3 hypothetical protein compare
CCNA_01802 +2.2 4.0 hypothetical protein compare
CCNA_00441 +2.2 9.4 chemotaxis receiver domain protein cheYI compare
CCNA_03030 +2.2 10.6 cytochrome c2 compare
CCNA_01186 +2.2 8.7 hypothetical protein compare
CCNA_00255 +2.2 3.9 esterase compare
CCNA_02004 +2.2 3.9 SOS-induced inhibitor of cell division SidA compare
CCNA_03372 +2.2 5.7 bacterioferritin-associated ferredoxin compare
CCNA_02616 +2.2 13.0 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01541 +2.2 13.9 LysR-family transcriptional regulator compare
CCNA_00162 +2.2 9.1 hypothetical protein compare
CCNA_02576 +2.1 12.1 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03959 +2.1 1.6 hypothetical protein compare
CCNA_03108 +2.1 15.0 TonB-dependent outer membrane receptor compare
CCNA_03808 +2.1 12.2 organic solvent resistance transport system Ttg2C protein compare
CCNA_03062 +2.1 12.2 cell wall hydrolase family protein compare
CCNA_01681 +2.1 7.1 RimI-like acetyltransferase compare
CCNA_02416 +2.1 9.7 DNA-binding protein HU compare
CCNA_01679 +2.1 11.5 succinylglutamic semialdehyde dehydrogenase compare
CCNA_00207 +2.1 10.4 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_01619 +2.1 10.0 NYN domain protein compare
CCNA_02339 +2.1 11.0 methyltransferase compare
CCNA_00447 +2.1 9.2 chemotaxis protein cheD compare
CCNA_00895 +2.1 12.2 hypothetical protein compare
CCNA_03089 +2.0 9.2 hypothetical protein compare
CCNA_03479 +2.0 10.0 MarR-family transcriptional regulator compare
CCNA_03519 +2.0 7.0 PadR-family transcriptional regulator compare
CCNA_01242 +2.0 16.7 amino acid permease compare
CCNA_01752 +2.0 10.1 YicC-family protein compare
CCNA_01181 +2.0 10.0 hypothetical protein compare
CCNA_00998 +2.0 8.9 ROS/MUCR transcriptional regulator compare
CCNA_03281 +2.0 16.9 AsnC-family transcriptional regulator compare
CCNA_02728 +2.0 9.2 hypothetical protein compare
CCNA_01942 +2.0 8.0 Rrf2 family protein compare
CCNA_01608 +2.0 7.7 TetR-family transcriptional regulator compare
CCNA_03688 +2.0 10.2 AsnC-family transcriptional regulator compare
CCNA_00756 +2.0 4.5 hypothetical protein compare
CCNA_03129 +2.0 11.9 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01699 +2.0 9.1 LacI-family transcriptional regulator compare
CCNA_00803 +2.0 7.4 chemotaxis protein cheW compare
CCNA_01505 +2.0 4.1 hypothetical protein compare
CCNA_02976 +1.9 8.4 MCP-signal associated domain protein compare
CCNA_02805 +1.9 8.5 hypothetical protein compare
CCNA_02330 +1.9 7.9 hypothetical protein compare
CCNA_00443 +1.9 8.1 chemotaxis protein cheW compare
CCNA_00705 +1.9 5.5 hypothetical protein compare
CCNA_03214 +1.9 8.1 hypothetical protein compare
CCNA_03762 +1.9 3.9 acetolactate synthase-related protein compare
CCNA_01680 +1.9 10.7 succinylarginine dihydrolase compare
CCNA_01678 +1.9 8.9 arginine N-succinyltransferase, beta chain compare
CCNA_01011 +1.9 8.0 imidazolonepropionase compare
CCNA_02575 +1.9 5.4 hypothetical protein compare
CCNA_01926 +1.9 8.4 GGDEF diguanylate cyclase DgcB compare
CCNA_01393 +1.9 12.7 soluble lytic murein transglycosylase compare
CCNA_01008 +1.9 12.5 urocanate hydratase compare
CCNA_01827 +1.9 8.0 cobyric acid synthase CobQ compare
CCNA_R0054 +1.9 3.7 tRNA-Gly compare
CCNA_01361 +1.9 3.9 PepSY superfamily protein compare
CCNA_02942 +1.9 5.9 nucleoside-diphosphate-sugar epimerase compare
CCNA_01193 +1.9 13.1 amylosucrase compare
CCNA_03964 +1.9 2.8 hypothetical protein compare
CCNA_03379 +1.9 3.0 Cro/CI family transcriptional regulator compare
CCNA_02854 +1.9 6.4 two-component response regulator compare
CCNA_00930 +1.9 12.5 riboflavin synthase alpha chain compare
CCNA_01168 +1.9 2.5 3-ketoacyl-CoA thiolase compare
CCNA_01677 +1.9 8.3 carboxypeptidase G2 precursor compare
CCNA_00931 +1.8 12.6 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_00834 +1.8 7.5 flagellin FljM compare
CCNA_00448 +1.8 9.8 cheU protein compare
CCNA_02250 +1.8 4.2 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_02467 +1.8 10.2 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_02760 +1.8 3.9 hypothetical protein compare
CCNA_03622 +1.8 9.2 beta-lactamase repressor compare
CCNA_02732 +1.8 4.2 hypothetical protein compare
CCNA_00929 +1.8 12.5 Riboflavin-specific deaminase family protein compare
CCNA_00031 +1.8 8.7 toxin protein VapC compare
CCNA_00945 +1.8 8.3 chemotaxis protein MotD compare
CCNA_00675 +1.8 6.6 VapC-like PIN domain ribonuclease compare
CCNA_03643 +1.8 2.1 succinate dehydrogenase membrane anchor subunit compare
CCNA_00400 +1.8 7.6 MarR/EmrR-family transcriptional regulator compare
CCNA_02151 +1.8 6.7 exodeoxyribonuclease VII small subunit compare
CCNA_00947 +1.8 12.4 flagellar hook protein FlgE compare
CCNA_00210 +1.8 13.0 TonB-dependent receptor compare
CCNA_03893 +1.8 3.7 hypothetical protein compare
CCNA_01728 +1.8 8.6 short chain dehydrogenase compare
CCNA_01266 +1.8 8.7 NTF2 superfamily protein compare
CCNA_02273 +1.8 5.6 glutathione peroxidase compare
CCNA_01406 +1.8 7.4 metal-dependent hydrolase compare
CCNA_03215 +1.7 10.4 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_02729 +1.7 12.4 oligopeptide transporter compare
CCNA_02379 +1.7 8.8 hypothetical protein compare
CCNA_00944 +1.7 7.8 flagellar hook length determination protein compare
CCNA_02338 +1.7 10.0 hypothetical protein compare
CCNA_01968 +1.7 4.6 pentapeptide repeats containing protein compare
CCNA_02073 +1.7 4.6 cupin domain transcriptional regulator compare
CCNA_01414 +1.7 10.3 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_01731 +1.7 7.0 colicin V production protein CvpA compare
CCNA_01415 +1.7 12.1 methyltransferase compare
CCNA_02287 +1.7 8.8 TetR-family transcriptional regulator compare
CCNA_02297 +1.7 6.2 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_02063 +1.7 7.4 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_03371 +1.7 6.3 bacterioferritin compare
CCNA_03805 +1.7 10.6 PadR-family transcriptional regulator compare
CCNA_00807 +1.7 2.1 ribonuclease P protein component compare
CCNA_02324 +1.7 8.5 heat shock protein 33 hsp33 compare
CCNA_01739 +1.7 9.0 LSU ribosomal protein L9P compare
CCNA_01339 +1.7 5.8 ArsR-family transcriptional regulator compare
CCNA_03391 +1.7 9.2 Cro/CI family transcriptional regulator compare
CCNA_02164 +1.7 4.1 glutamate dehydrogenase/leucine dehydrogenase compare
CCNA_01575 +1.7 10.0 glucose / sorbosone dehydrogenase compare
CCNA_03740 +1.7 6.8 cysteine synthase compare
CCNA_03811 +1.7 10.0 LysR-family transcriptional regulator compare
CCNA_02171 +1.7 10.6 nucleoside permease nupC compare
CCNA_01057 +1.7 10.1 hypothetical protein compare
CCNA_01748 +1.7 8.4 methyltransferase compare
CCNA_03938 +1.7 4.3 hypothetical protein compare
CCNA_01533 +1.6 6.4 hypothetical protein compare
CCNA_01074 +1.6 3.8 entericidin B-like protein compare
CCNA_00768 +1.6 3.7 hypothetical protein compare
CCNA_02910 +1.6 13.0 TonB-dependent receptor compare
CCNA_00147 +1.6 2.5 hypothetical protein compare
CCNA_00446 +1.6 6.5 chemotaxis receiver domain protein cheYII compare
CCNA_02395 +1.6 4.8 hypothetical protein compare
CCNA_01338 +1.6 7.2 glyoxalase family protein compare
CCNA_01690 +1.6 3.9 MAPEG family membrane protein compare
CCNA_00946 +1.6 7.2 Basal-body rod modification protein FlgD compare
CCNA_01020 +1.6 6.7 LacI-family transcriptional regulator compare
CCNA_02125 +1.6 11.5 polar development protein podJ compare
CCNA_01163 +1.6 14.8 ice nucleation protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Beta-Lactose in Caulobacter crescentus NA1000

For carbon source Beta-Lactose across organisms