Experiment set1IT032 for Sinorhizobium meliloti 1021

Compare to:

Uridine carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc02777 +1.7 9.8 transcriptional regulator compare
SMc02460 +1.7 12.3 hypothetical protein compare
SMc00794 +1.6 11.9 two-component response regulator compare
SMc01506 +1.4 10.2 RNA polymerase sigma factor compare
SM_b20483 +1.4 10.4 catabolite repressor protein compare
SMc02906 +1.4 1.9 hypothetical protein compare
SMc02052 +1.3 2.0 hypothetical protein compare
SMc02166 +1.2 6.3 dihydroorotase compare
SMc01419 +1.2 3.7 RNA polymerase sigma factor protein compare
SM_b21346 +1.2 7.0 LacI family transcriptional regulator compare
SMc01504 +1.1 8.3 two-component response regulator compare
SMc01418 +1.1 9.1 signal peptide protein compare
SMa0113 +1.1 9.7 Sensor histidine kinase compare
SMc00802 +1.1 1.3 hypothetical protein compare
SM_b20392 +1.0 5.9 transcriptional regulator NanR compare
SM_b20725 +1.0 1.7 hypothetical protein compare
SMc02167 +1.0 6.4 fructose transport system kinase compare
SM_b20320 +0.9 2.0 TRAP-type large permease component compare
SMc02901 +0.9 1.5 hypothetical protein compare
SM_b21398 +0.9 2.1 hypothetical protein compare
SMc02246 +0.9 1.3 hypothetical protein compare
SM_b20313 +0.9 5.0 glycerone kinase compare
SMc02497 +0.9 2.6 hypothetical protein compare
SM_b20314 +0.9 4.4 glycerone kinase compare
SMc01099 +0.8 2.7 tRNA pseudouridine synthase A compare
SMc04460 +0.8 6.9 glycogen phosphorylase compare
SM_b20312 +0.8 5.1 dihydroxyacetone kinase compare
SM_b20953 +0.8 1.4 hypothetical protein compare
SM_b21569 +0.8 3.0 transcriptional regulator compare
SMc02544 +0.8 1.1 hypothetical protein compare
SM_b21633 +0.8 1.3 enoyl-CoA hydratase compare
SMc01089 +0.8 1.6 hypothetical protein compare
SMc00241 +0.8 2.3 transcriptional regulator compare
SMc04239 +0.7 1.1 hypothetical protein compare
SMa1118 +0.7 1.4 HspC2 heat shock protein compare
SMc02164 +0.7 2.9 fructokinase compare
SMc00351 +0.7 1.1 hypothetical protein compare
SM_b20050 +0.7 1.8 hypothetical protein compare
SMc03037 +0.7 3.3 flagellin A compare
SMc03050 +0.7 1.6 flagellar biosynthesis regulatory protein FlaF compare
SMa1428 +0.7 4.5 TetR/AcrR family transcriptional regulator compare
SMc02565 +0.7 4.2 hypothetical protein compare
SM_b20619 +0.7 4.7 regulatory protein compare
SMa1323 +0.7 1.8 Transcription regulator compare
SM_b20882 +0.7 1.7 hypothetical protein compare
SMc04359 +0.7 3.8 transmembrane protein compare
SMc01280 +0.6 2.0 protease compare
SMc04223 +0.6 3.1 hypothetical protein compare
SM_b20375 +0.6 1.9 transcriptional regulator compare
SM_b20655 +0.6 2.5 hypothetical protein compare
SMc03128 +0.6 1.8 ABC transporter permease compare
SMc00712 +0.6 1.6 hypothetical protein compare
SMc04345 +0.6 2.8 hypothetical protein compare
SMa0114 +0.6 4.0 two-component response regulator compare
SM_b20086 +0.6 0.9 hypothetical protein compare
SMc00239 +0.6 0.9 hypothetical protein compare
SMa1765 +0.6 0.9 hypothetical protein compare
SM_b21539 +0.6 3.6 aldehyde dehydrogenase compare
SMa0870 +0.6 2.7 NodD1 nod-box dependent transcriptional activator compare
SM_b21408 +0.6 2.9 LysR family transcriptional regulator compare
SM_b21580 +0.6 1.0 hypothetical protein compare
SMc03923 +0.6 3.8 glucose-1-phosphate adenylyltransferase compare
SMc00045 +0.6 1.9 cytochrome C signal peptide protein compare
SMa1639 +0.6 1.2 hypothetical protein compare
SMc01024 +0.6 1.1 preprotein translocase subunit SecG compare
SMa0211 +0.6 0.8 hypothetical protein compare
SMc04224 +0.6 1.0 hypothetical protein compare
SMc00458 +0.6 4.6 transcriptional regulator compare
SMc00404 +0.6 0.8 hypothetical protein compare
SM_b20307 +0.5 0.8 dihydroxyacetone kinase compare
SMa0543 +0.5 1.0 hypothetical protein compare
SMa0518 +0.5 1.7 hypothetical protein compare
SM_b20632 +0.5 2.9 sugar uptake ABC transporter permease compare
SMc01434 +0.5 2.0 hypothetical protein compare
SM_b20542 +0.5 1.9 protein in ISRm14 compare
SMa1101 +0.5 0.8 hypothetical protein compare
SMc03900 +0.5 4.7 cyclic beta-1,2-glucan ABc transporter compare
SMc01468 +0.5 2.1 chemotaxis protein compare
SMc00976 +0.5 1.0 enoyl-CoA hydratase compare
SM_b20717 +0.5 4.3 LacI family transcriptional regulator compare
SMa0750 +0.5 2.0 LysR family transcriptional regulator compare
SM_b20519 +0.5 1.8 hypothetical protein compare
SMc02693 +0.5 1.2 peptidyl-tRNA hydrolase compare
SMc02318 +0.5 1.5 hypothetical protein compare
SM_b21485 +0.5 2.1 hypothetical protein compare
SMc03930 +0.5 0.9 sarcosine oxidase subunit gamma compare
SMa2059 +0.5 2.6 hypothetical protein compare
SM_b20597 +0.5 2.4 hypothetical protein compare
SMc01765 +0.5 1.0 hypothetical protein compare
SMc01508 +0.5 1.3 hypothetical protein compare
SMc01149 +0.5 2.1 hypothetical protein compare
SM_b20549 +0.5 1.9 hypothetical protein compare
SM_b20728 +0.5 1.7 hypothetical protein compare
SMc02173 +0.5 1.1 hypothetical protein compare
SM_b21096 +0.5 0.9 amino acid transporter ABC transporter ATP-binding protein compare
SMc02095 +0.5 3.2 hypothetical protein compare
SM_b21593 +0.5 3.0 sugar uptake ABC transporter permease compare
SMc02306 +0.5 1.1 hypothetical protein compare
SMc05011 +0.5 1.3 bacteriophage DNA-binding transcription regulator compare
SMa1285 +0.5 1.2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
SMc03159 +0.5 1.5 ABC transporter ATP-binding protein compare
SMc02368 +0.5 3.8 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
SMc02694 +0.5 0.9 ATP-dependent Clp protease adaptor compare
SMc02863 +0.5 1.6 recombination protein F compare
SM_b20373 +0.5 2.1 TRAP dicarboxylate transporter compare
SMc02366 +0.5 3.8 transcriptional regulator compare
SMc00470 +0.5 1.7 hypothetical protein compare
SMc02842 +0.5 1.4 hypothetical protein compare
SMc03922 +0.5 3.9 glycogen branching protein compare
SMc00914 +0.5 1.9 oxidoreductase compare
SMa1136 +0.5 1.8 hypothetical protein compare
SMc01346 +0.5 1.9 leucyl/phenylalanyl-tRNA--protein transferase compare
SMa2168 +0.5 0.9 tRNA-Met compare
SMc04352 +0.5 2.2 signal peptide protein compare
SMc03969 +0.5 2.2 hypothetical protein compare
SMc02976 +0.5 1.8 transcriptional regulator compare
SMc02343 +0.4 1.9 transport transmembrane protein compare
SMc02510 +0.4 0.5 ferric uptake regulation protein compare
SMc02828 +0.4 2.8 hydroxyacid dehydrogenase compare
SMc03899 +0.4 0.6 hypothetical protein compare
SMc01698 +0.4 2.6 oxidoreductase compare
SM_b21374 +0.4 1.6 tagatose kinase (EC 2.7.1.101) (from data) compare
SMc02709 +0.4 1.2 hypothetical protein compare
SMa0964 +0.4 1.7 hypothetical protein compare
SMc00566 +0.4 1.4 hypothetical protein compare
SM_b21488 +0.4 3.6 cytochrome o ubiquinol oxidase subunit I compare
SMc01634 +0.4 1.8 ABC transporter permease compare
SM_b20884 +0.4 1.3 hypothetical protein compare
SMa1365 +0.4 0.8 ATP-binding protein compare
SM_b20026 +0.4 1.0 hypothetical protein compare
SMc02860 +0.4 0.8 hypothetical protein compare
SMa0831 +0.4 2.3 NifX iron-molybdenum cluster-binding protein compare
SMc00788 +0.4 1.5 peptide ABC transporter permease compare
SMc00821 +0.4 1.0 hypothetical protein compare
SMc02165 +0.4 2.4 orotate phosphoribosyltransferase compare
SM_b22004 +0.4 2.1 plasmid stabilization system protein compare
SMc01953 +0.4 2.7 2-component receiver domain-containing protein compare
SMc04385 +0.4 1.6 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc03284 +0.4 1.4 hypothetical protein compare
SMc00369 +0.4 1.0 oxidoreductase compare
SM_b20662 +0.4 1.9 oxidoreductase compare
SM_b20349 +0.4 2.5 sugar ABC transporter compare
SMc04351 +0.4 2.6 transmembrane ATP-binding ABC transporter protein compare
SMc04238 +0.4 1.7 hypothetical protein compare
SMa1545 +0.4 2.0 NuoJ2 NADH:quinone oxidoreductase subunit 6 (chain J) compare
SMa0319 +0.4 3.0 AraC family transcriptional regulator compare
SMc01223 +0.4 1.7 transcriptional regulator compare
SMc01556 +0.4 1.2 hypothetical protein compare
SM_b20029 +0.4 1.8 hypothetical protein compare
SMa1200 +0.4 1.3 hypothetical protein compare
SMc02904 +0.4 1.3 hypothetical protein compare
SMc02714 +0.4 0.8 hypothetical protein compare
SMc00665 +0.4 1.5 hypothetical protein compare
SM_b21487 +0.4 2.6 cytochrome o ubiquinol oxidase subunit II compare
SMa1696 +0.4 3.2 Sensor histidine kinase compare
SM_b20011 +0.4 1.6 hypothetical protein compare
SMa1831 +0.4 2.1 hypothetical protein compare
SMc03878 +0.4 1.8 acetoacetyl-CoA reductase compare
SM_b20131 +0.4 1.4 oxidoreductase compare
SMa2195 +0.4 1.3 ABC transporter ATP-binding protein compare
SMc01716 +0.4 2.3 sensor histidine kinase transmembrane protein compare
SM_b20962 +0.4 1.2 phoshomethylpyrimidine kinase compare
SMc00791 +0.4 0.4 hypothetical protein compare
SMc02874 +0.4 1.8 N-acetylmuramic acid 6-phosphate etherase compare
SMc00789 +0.4 2.1 peptide ABC transporter ATP-binding protein compare
SMc03250 +0.4 1.3 hypothetical protein compare
SMc00795 +0.4 2.1 hypothetical protein compare
SMc01204 +0.4 2.6 transmembrane oxidoreductase compare
SMc04357 +0.4 1.3 hypothetical protein compare
SMa5009 +0.4 2.2 hypothetical protein compare
SM_b20948 +0.4 0.7 glucosyltransferase compare
SMc01091 +0.4 0.8 hypothetical protein compare
SMc00411 +0.4 2.7 hypothetical protein compare
SM_b20448 +0.4 1.4 hypothetical protein compare
SMc04866 +0.4 1.8 hypothetical protein compare
SMc00916 +0.4 1.0 glutathione S-transferase compare
SMc01275 +0.4 2.8 ribosomal large subunit pseudouridine synthase C protein compare
SMc00425 +0.4 0.6 transcriptional regulator compare
SMc04040 +0.4 1.3 heat shock protein compare
SMc03031 +0.4 1.1 flagellar basal body P-ring biosynthesis protein FlgA compare
SM_b20939 +0.4 2.3 6-pyruvoyl-tetrahydropterin synthase compare
SMc03158 +0.4 1.3 ABC transporter permease compare
SMc02267 +0.4 1.9 hypothetical protein compare
SMc04362 +0.4 2.7 transporter compare
SMc00939 +0.4 1.7 hypothetical protein compare
SM_b22023 +0.4 0.6 molecular chaperone GroES compare
SM_b20041 +0.4 1.6 hypothetical protein compare
SMc02554 +0.4 2.3 hypothetical protein compare
SMa0166 +0.4 1.7 hypothetical protein compare
SM_b20030 +0.4 1.4 RNA polymerase sigma factor SigJ compare
SMc05001 +0.4 1.2 hypothetical protein compare
SMc00826 +0.4 2.0 16S ribosomal RNA methyltransferase RsmE compare
SMa1910 +0.4 1.8 hypothetical protein compare
SMa1757 +0.4 1.1 Short chain compare
SMc02180 +0.4 2.2 hypothetical protein compare
SMc02280 +0.4 0.6 hypothetical protein compare
SMa1779 +0.4 1.3 hypothetical protein compare
SM_b21334 +0.4 1.1 hypothetical protein compare
SMc04029 +0.4 0.9 low specificity L-threonine aldolase compare
SMc02631 +0.4 0.7 hypothetical protein compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source Uridine in Sinorhizobium meliloti 1021

For carbon source Uridine across organisms