Experiment set1IT031 for Sinorhizobium meliloti 1021

Compare to:

D-Glucosamine Hydrochloride carbon source

200 most important genes:

  gene name fitness t score description  
SMc02572 -10.4 -6.5 imidazole glycerol phosphate synthase subunit HisH compare
SMc02899 -8.5 -8.3 prephenate dehydratase compare
SMc00235 -8.1 -5.6 anthranilate phosphoribosyltransferase compare
SMc00236 -8.0 -5.5 Indole-3-glycerol phosphate synthase compare
SMc00614 -7.9 -5.5 phosphoribosylglycinamide formyltransferase compare
SMc02767 -7.9 -10.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00495 -7.8 -4.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02766 -7.8 -14.1 tryptophan synthase subunit beta compare
SMc01054 -7.8 -5.4 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc01801 -7.8 -5.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc01494 -7.6 -10.4 phosphoserine phosphatase compare
SMc04002 -7.6 -9.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02725 -7.5 -10.4 anthranilate synthase compare
SMc02877 -7.4 -4.5 hypothetical protein compare
SMc01843 -7.4 -12.4 5,10-methylenetetrahydrofolate reductase compare
SMc02217 -7.3 -5.0 O-succinylhomoserine sulfhydrylase compare
SMc03797 -7.3 -10.0 homoserine O-succinyltransferase compare
SMc01726 -7.0 -7.8 acetylglutamate kinase compare
SMc01431 -7.0 -11.7 acetolactate synthase 3 catalytic subunit compare
SMc00711 -6.9 -6.7 cyclohexadienyl dehydrogenase compare
SMc00640 -6.9 -9.4 phosphoserine aminotransferase compare
SMc02765 -6.8 -12.8 tryptophan synthase subunit alpha compare
SMc00917 -6.8 -6.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMa1635 -6.7 -2.5 hypothetical protein compare
SMc04405 -6.7 -10.2 3-isopropylmalate dehydrogenase compare
SMc00494 -6.7 -2.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02425 -6.7 -4.6 transcriptional regulator compare
SMc04026 -6.6 -8.9 glutamate synthase compare
SMc00412 -6.6 -4.5 orotidine 5'-phosphate decarboxylase compare
SMc02245 -6.6 -7.8 dihydroorotate dehydrogenase 2 compare
SMc04028 -6.5 -18.4 glutamate synthase compare
SMc04045 -6.5 -9.9 dihydroxy-acid dehydratase compare
SMc03895 -6.4 -18.6 pyruvate carboxylase compare
SMc00993 -6.4 -10.8 phosphoribosylamine--glycine ligase compare
SMc02137 -6.4 -6.3 ornithine carbamoyltransferase compare
SMc00554 -6.4 -7.6 amidophosphoribosyltransferase compare
SMc02165 -6.3 -7.4 orotate phosphoribosyltransferase compare
SMc02717 -6.2 -15.6 2-isopropylmalate synthase compare
SMc01360 -6.2 -4.3 aspartate carbamoyltransferase catalytic subunit compare
SMc03112 -6.2 -16.7 B12-dependent methionine synthase compare
SMc02570 -6.1 -6.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02755 -6.1 -5.9 S-adenosyl-L-homocysteine hydrolase compare
SMc00615 -6.1 -11.2 phosphoribosylaminoimidazole synthetase compare
SMc04088 -6.0 -9.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SM_b21175 -6.0 -6.3 phosphate uptake ABC transporter permease compare
SMc00493 -5.9 -8.0 phosphoribosylformylglycinamidine synthase I compare
SMc03070 -5.8 -8.9 glucose-6-phosphate 1-dehydrogenase compare
SMc00918 -5.8 -10.7 ATP phosphoribosyltransferase regulatory subunit compare
SMc01004 -5.8 -7.8 phosphoribosyl-AMP cyclohydrolase compare
SM_b21174 -5.7 -6.8 phosphate uptake ABC transporter permease compare
SMc03823 -5.7 -10.5 isopropylmalate isomerase large subunit compare
SMc00815 -5.6 -3.6 inosine 5'-monophosphate dehydrogenase compare
SMc02569 -5.6 -5.0 imidazole glycerol phosphate synthase subunit HisF compare
SMc03826 -5.6 -5.4 argininosuccinate synthase compare
SMc00293 -5.6 -11.7 homoserine dehydrogenase compare
SMc03777 -5.5 -10.1 gamma-glutamyl phosphate reductase compare
SMc01361 -5.4 -7.4 dihydroorotase compare
SMc03979 -5.4 -3.7 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02307 -5.3 -8.9 histidinol dehydrogenase compare
SMc02123 -5.3 -4.8 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00092 -5.2 -12.2 phosphoadenosine phosphosulfate reductase compare
SMc01880 -5.2 -3.6 pantoate--beta-alanine ligase compare
SMc03763 -5.1 -3.5 cytosine-specific methyltransferase compare
SM_b21177 -5.1 -10.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc00488 -5.1 -14.1 phosphoribosylformylglycinamidine synthase II compare
SMc03776 -5.0 -4.9 gamma-glutamyl kinase compare
SMc01215 -4.8 -3.3 carbamoyl phosphate synthase large subunit compare
SMc03981 -4.8 -7.4 phosphoglycerate kinase compare
SMc01569 -4.8 -2.4 carbamoyl phosphate synthase small subunit compare
SMc00131 -4.6 -15.7 transcriptional regulator compare
SMc04001 -4.5 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01495 -4.5 -5.4 transcriptional regulator compare
SMc02166 -4.5 -9.2 dihydroorotase compare
SMc01770 -4.4 -2.0 serine hydroxymethyltransferase compare
SMc03978 -4.4 -4.2 transketolase compare
SMc00017 -4.3 -2.2 homoserine kinase compare
SMc03795 -4.3 -2.3 isopropylmalate isomerase small subunit compare
SMc02138 -4.3 -7.4 acetylornithine transaminase compare
SMc00294 -4.3 -12.2 aminotransferase compare
SMc02246 -4.3 -1.6 hypothetical protein compare
SMc00963 -4.3 -6.5 hypothetical protein compare
SMc01881 -4.2 -4.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SM_b21176 -4.1 -6.6 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02707 -4.0 -7.2 hypothetical protein compare
SMc00641 -3.9 -5.2 D-3-phosphoglycerate dehydrogenase compare
SMc00876 -3.8 -6.1 ATP-binding MRP protein compare
SMc00090 -3.8 -11.5 sulfate adenylyltransferase compare
SMc02124 -3.8 -14.0 nitrite reductase compare
SMc04005 -3.6 -7.3 pyruvate kinase compare
SMc01053 -3.6 -5.1 siroheme synthase compare
SMc00091 -3.6 -12.1 sulfate adenylyltransferase compare
SMc01206 -3.4 -3.0 queuine tRNA-ribosyltransferase compare
SMc00619 -3.3 -3.6 hypothetical protein compare
SMc02574 -3.3 -4.8 imidazoleglycerol-phosphate dehydratase compare
SMc03229 -3.3 -2.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc01430 -3.3 -7.4 acetolactate synthase 3 regulatory subunit compare
SMc03069 -3.1 -3.3 6-phosphogluconolactonase compare
SMc02690 -3.0 -6.9 hypothetical protein compare
SMc04346 -3.0 -4.0 ketol-acid reductoisomerase compare
SMc00726 -2.8 -1.4 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01578 -2.7 -10.5 aspartate aminotransferase compare
SMc03068 -2.7 -11.8 phosphogluconate dehydratase compare
SMc01124 -2.7 -7.8 PII uridylyl-transferase compare
SMc00414 -2.6 -10.4 hypothetical protein compare
SM_b20903 -2.4 -11.0 sugar uptake ABC transporter permease compare
SM_b20902 -2.3 -11.3 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc00982 -2.2 -8.4 dioxygenase compare
SMc01441 -2.2 -6.7 membrane bound protease compare
SMc02640 -2.1 -5.4 UDP-glucuronic acid epimerase compare
SMc02835 -2.1 -8.6 glucokinase compare
SMc02838 -2.0 -7.2 phosphoglyceromutase compare
SMc02683 -2.0 -2.9 hypothetical protein compare
SMc00492 -2.0 -1.5 hypothetical protein compare
SMc01028 -2.0 -12.9 phosphopyruvate hydratase compare
SMc01501 -2.0 -1.8 mannitol 2-dehydrogenase compare
SM_b20904 -1.8 -2.3 sugar uptake ABC transporter ATP-binding protein compare
SMc01147 -1.7 -3.4 coproporphyrinogen III oxidase compare
SMc01440 -1.7 -4.5 hydrolase serine protease transmembrane protein compare
SMc01007 -1.7 -2.5 hypothetical protein compare
SMc00302 -1.7 -3.7 hypothetical protein compare
SMc02112 -1.7 -7.0 hypothetical protein compare
SMc02833 -1.6 -2.4 penicillin-insensitive murein endopeptidase compare
SMc00295 -1.6 -1.3 hypothetical protein compare
SMc01613 -1.6 -4.6 ribose-5-phosphate isomerase B compare
SMc02058 -1.6 -2.2 YAJC protein compare
SMc01852 -1.5 -9.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc00981 -1.5 -5.8 ferredoxin protein compare
SMc02225 -1.5 -5.5 hypothetical protein compare
SMc00079 -1.5 -6.0 hypothetical protein conserved
SMc02983 -1.4 -6.0 ornithine, DAP, or arginine decarboxylase compare
SM_b20392 -1.4 -6.8 transcriptional regulator NanR compare
SMc03242 -1.4 -2.0 GTP-binding protein compare
SMc02228 -1.4 -7.8 acetyl-CoA acetyltransferase compare
SMa0112 -1.4 -4.3 hypothetical protein compare
SMc00709 -1.3 -3.7 hypothetical protein compare
SMc02229 -1.3 -7.8 acyl-CoA dehydrogenase compare
SMc02227 -1.3 -5.6 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc00369 -1.3 -1.8 oxidoreductase compare
SMa2020 -1.3 -5.0 Transcriptional regulator compare
SMc02232 -1.3 -3.9 hypothetical protein compare
SMc01842 -1.2 -1.2 methyltransferase transcription regulator protein compare
SMc03100 -1.2 -1.2 hypothetical protein compare
SMc00088 -1.2 -2.0 hypothetical protein compare
SM_b21218 -1.2 -3.8 glucosamine-6-phosphate deaminase, isomerizing (EC 3.5.99.6) (from data) compare
SMc03153 -1.2 -4.7 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc04042 -1.2 -7.0 monophosphatase compare
SMc01207 -1.2 -1.6 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMa2215 -1.2 -3.3 GntR family transcriptional regulator compare
SMc02677 -1.2 -6.0 pyrroline-5-carboxylate reductase compare
SMc03924 -1.1 -6.9 glycogen synthase compare
SMc01845 -1.1 -2.5 transglycosylase transmembrane protein compare
SMc03980 -1.1 -3.8 hypothetical protein compare
SMc02145 -1.1 -1.0 signal peptide protein compare
SMc00450 -1.1 -2.1 protoheme IX farnesyltransferase compare
SMc00334 -1.1 -2.0 cytidylate kinase compare
SMc02308 -1.1 -3.2 hypothetical protein compare
SMc02793 -1.1 -6.9 hypothetical protein compare
SMa1770 -1.1 -1.5 hypothetical protein compare
SMc02812 -1.1 -2.4 hypothetical protein compare
SMc00579 -1.1 -3.6 dimethyladenosine transferase compare
SMc01438 -1.0 -4.1 protease precursor signal peptide protein compare
SMc02309 -1.0 -4.1 arsenate reductase compare
SMa5010 -1.0 -1.4 hypothetical protein compare
SMc02689 -1.0 -6.0 aldehyde dehydrogenase compare
SM_b20148 -1.0 -3.6 transcriptional regulator compare
SMa0789 -1.0 -2.9 GntR family transcriptional regulator compare
SMc00970 -1.0 -1.9 exodeoxyribonuclease VII small subunit compare
SMc02050 -1.0 -2.6 trigger factor compare
SMc03935 -1.0 -7.8 hypothetical protein compare
SMc01764 -1.0 -6.1 arginyl-tRNA-protein transferase compare
SMc02434 -1.0 -2.4 hypothetical protein compare
SMa1639 -1.0 -1.0 hypothetical protein compare
SMc02544 -1.0 -0.8 hypothetical protein compare
SMc01187 -0.9 -1.8 rare lipoprotein A compare
SMc03868 -0.9 -4.1 hypothetical protein compare
SMc04000 -0.9 -0.7 hypothetical protein compare
SMc00821 -0.9 -1.4 hypothetical protein compare
SMc01568 -0.9 -1.3 hypothetical protein compare
SMa2253 -0.9 -1.6 hypothetical protein compare
SMc00914 -0.9 -3.0 oxidoreductase compare
SMc04330 -0.9 -2.4 trimethylamine methyltransferase compare
SMc02543 -0.9 -5.5 hypothetical protein compare
SMc03258 -0.9 -4.1 transcriptional regulator compare
SMc01164 -0.9 -5.3 hypothetical protein compare
SMa1442 -0.9 -3.6 GntR family transcriptional regulator compare
SMc02894 -0.9 -1.2 hypothetical protein compare
SMc02144 -0.9 -4.2 phosphate ABC transporter permease compare
SMc00987 -0.9 -2.5 hypothetical protein compare
SMc02115 -0.9 -0.7 hypothetical protein compare
SMc00727 -0.9 -5.8 3-hydroxybutyryl-CoA dehydrogenase compare
SMc00838 -0.9 -4.1 hypothetical protein compare
SMc00329 -0.9 -2.2 iron response regulator protein compare
SM_b21219 -0.8 -5.5 ABC transporter for D-Glucosamine, permease component 1 (from data) compare
SMc00451 -0.8 -4.0 processing protease compare
SMc02141 -0.8 -1.9 phosphate transporter PhoU compare
SM_b21192 -0.8 -5.5 fructose-1,6-bisphosphate aldolase compare
SMc01522 -0.8 -1.5 hypothetical protein compare
SMc00166 -0.8 -1.4 oxidoreductase NAD protein compare
SM_b20547 -0.8 -1.8 hypothetical protein compare
SMc04093 -0.8 -6.3 acetyl-CoA synthetase compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-Glucosamine Hydrochloride in Sinorhizobium meliloti 1021

For carbon source D-Glucosamine Hydrochloride across organisms