Experiment set1IT031 for Caulobacter crescentus NA1000

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01851 +2.9 21.8 quinol cytochrome oxidase polypeptide II compare
CCNA_01848 +2.8 16.5 quinol cytochrome oxidase polypeptide IV compare
CCNA_02030 +2.7 6.0 hypothetical protein compare
CCNA_01712 +2.7 21.2 CopY/TcrY family transcriptional repressor compare
CCNA_02026 +2.6 8.4 hypothetical protein compare
CCNA_01850 +2.6 18.1 quinol cytochrome oxidase polypeptide I compare
CCNA_00699 +2.6 12.1 LSU ribosomal protein L28P compare
CCNA_00769 +2.5 12.3 TetR family transcriptional regulator compare
CCNA_02021 +2.5 7.5 hypothetical protein compare
CCNA_01849 +2.4 12.3 quinol cytochrome oxidase polypeptide III compare
CCNA_03280 +2.3 18.9 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01840 +2.3 19.8 MerR-family transcriptional regulator compare
CCNA_02416 +2.3 10.8 DNA-binding protein HU compare
CCNA_02037 +2.3 13.8 ATP-dependent endopeptidase Lon compare
CCNA_02028 +2.3 3.1 NTF2 superfamily protein compare
CCNA_00296 +2.3 11.2 phosphate regulon response regulator PhoB compare
CCNA_03961 +2.3 6.9 hypothetical protein compare
CCNA_03824 +2.3 14.0 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_01780 +2.2 16.3 exopolyphosphatase compare
CCNA_01525 +2.2 9.9 flagellar biosynthesis repressor flbT compare
CCNA_02066 +2.2 12.4 phytoene/squalene synthase family protein compare
CCNA_00264 +2.2 13.9 C4-dicarboxylate transport protein compare
CCNA_03524 +2.2 12.5 di-/tripeptide transporter compare
CCNA_02132 +2.1 7.9 LacI-family transcriptional regulator compare
CCNA_02000 +2.1 2.6 SSU ribosomal protein S2P compare
CCNA_03064 +2.1 13.5 PadR-family transcriptional regulator compare
CCNA_02025 +2.1 5.6 hypothetical protein compare
CCNA_02957 +2.1 6.3 ArsR-family transcriptional regulator compare
CCNA_02591 +2.0 10.5 glutaredoxin compare
CCNA_01059 +2.0 18.1 S-layer protein rsaA compare
CCNA_01942 +2.0 8.6 Rrf2 family protein compare
CCNA_01684 +2.0 8.8 phenylalanine-4-hydroxylase compare
CCNA_01964 +2.0 5.1 NADH dehydrogenase compare
CCNA_01739 +2.0 9.2 LSU ribosomal protein L9P compare
CCNA_01801 +2.0 8.4 hypothetical protein compare
CCNA_03289 +1.9 9.4 HicB-family RNA-binding protein compare
CCNA_00684 +1.9 3.8 anti-sigma factor, ChrR-family compare
CCNA_02103 +1.9 11.5 hypothetical protein compare
CCNA_02448 +1.9 12.8 hypothetical protein compare
CCNA_01593 +1.9 11.6 Xaa-pro aminopeptidase compare
CCNA_02250 +1.9 4.6 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_02447 +1.9 13.2 PspA/IM30 family regulatory protein compare
CCNA_01804 +1.9 10.7 glutathione peroxidase compare
CCNA_01453 +1.9 4.5 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01094 +1.9 3.4 hypothetical protein compare
CCNA_01573 +1.9 10.4 ArsR-family transcriptional regulator compare
CCNA_00027 +1.9 4.5 2OG-Fe(II) oxygenase compare
CCNA_03012 +1.9 10.1 peroxiredoxin compare
CCNA_03271 +1.9 11.5 methionine gamma-lyase compare
CCNA_01847 +1.8 12.2 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01913 +1.8 10.8 MarR-family transcriptional regulator compare
CCNA_00028 +1.8 6.4 TonB-dependent receptor compare
CCNA_03519 +1.8 7.3 PadR-family transcriptional regulator compare
CCNA_01790 +1.8 6.7 protein translocase subunit secG compare
CCNA_02387 +1.8 14.2 glutathione reductase compare
CCNA_02133 +1.8 7.5 glucokinase compare
CCNA_02980 +1.8 11.3 tryptophan 2,3-dioxygenase compare
CCNA_01979 +1.8 7.7 LexA repressor compare
CCNA_01690 +1.8 5.6 MAPEG family membrane protein compare
CCNA_03936 +1.8 4.5 hypothetical protein compare
CCNA_00846 +1.8 15.0 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_03252 +1.8 12.7 CopY/TcrY-family transcriptional regulator compare
CCNA_02619 +1.8 14.3 stomatin/prohibitin-related protein compare
CCNA_03689 +1.8 11.7 alanine dehydrogenase compare
CCNA_00939 +1.8 6.3 MarR-family transcriptional regulator compare
CCNA_03989 +1.8 12.7 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00161 +1.8 10.6 hypothetical protein compare
CCNA_R0037 +1.8 5.6 tRNA-Glu compare
CCNA_01802 +1.8 3.9 hypothetical protein compare
CCNA_01931 +1.8 9.4 TetR-family transcriptional regulator compare
CCNA_01923 +1.8 8.7 ATP-dependent RNA helicase compare
CCNA_02617 +1.8 11.7 histidinol-phosphate aminotransferase compare
CCNA_01526 +1.7 5.7 flagellar biosynthesis regulatory protein flaF compare
CCNA_00518 +1.7 11.6 LSU ribosomal protein L25P compare
CCNA_02252 +1.7 5.7 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_02534 +1.7 3.6 hypothetical protein compare
CCNA_03287 +1.7 10.2 PadR-family transcriptional regulator compare
CCNA_02287 +1.7 9.0 TetR-family transcriptional regulator compare
CCNA_03740 +1.7 8.1 cysteine synthase compare
CCNA_01186 +1.7 9.0 hypothetical protein compare
CCNA_03479 +1.7 8.6 MarR-family transcriptional regulator compare
CCNA_01541 +1.7 10.9 LysR-family transcriptional regulator compare
CCNA_01361 +1.7 4.4 PepSY superfamily protein compare
CCNA_03030 +1.7 7.5 cytochrome c2 compare
CCNA_01528 +1.7 9.0 flagellin fljK compare
CCNA_01751 +1.7 6.4 aminodeoxychorismate lyase compare
CCNA_03123 +1.7 9.8 ArsR-family transcriptional regulator compare
CCNA_01655 +1.6 7.6 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_02616 +1.6 9.7 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02004 +1.6 3.1 SOS-induced inhibitor of cell division SidA compare
CCNA_03643 +1.6 2.2 succinate dehydrogenase membrane anchor subunit compare
CCNA_01742 +1.6 6.2 hypothetical protein compare
CCNA_02805 +1.6 6.6 hypothetical protein compare
CCNA_02379 +1.6 9.5 hypothetical protein compare
CCNA_02942 +1.6 4.8 nucleoside-diphosphate-sugar epimerase compare
CCNA_03108 +1.6 11.4 TonB-dependent outer membrane receptor compare
CCNA_00895 +1.6 9.4 hypothetical protein compare
CCNA_01619 +1.6 8.8 NYN domain protein compare
CCNA_01763 +1.6 10.3 multifunctional aminopeptidase compare
CCNA_00847 +1.6 7.4 leucine-responsive regulatory protein compare
CCNA_02646 +1.6 2.8 cell division protein MraZ compare
CCNA_01752 +1.6 7.6 YicC-family protein compare
CCNA_02339 +1.6 9.5 methyltransferase compare
CCNA_01181 +1.6 8.7 hypothetical protein compare
CCNA_03129 +1.6 9.0 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01037 +1.6 8.1 GntR-family transcriptional regulator compare
CCNA_02576 +1.5 8.8 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_00527 +1.5 8.0 hypothetical protein compare
CCNA_03805 +1.5 11.2 PadR-family transcriptional regulator compare
CCNA_01679 +1.5 8.7 succinylglutamic semialdehyde dehydrogenase compare
CCNA_02164 +1.5 3.7 glutamate dehydrogenase/leucine dehydrogenase compare
CCNA_02575 +1.5 5.1 hypothetical protein compare
CCNA_03325 +1.5 5.2 hypothetical protein compare
CCNA_03062 +1.5 9.4 cell wall hydrolase family protein compare
CCNA_03043 +1.5 5.0 type IV pilin protein pilA compare
CCNA_03893 +1.5 3.7 hypothetical protein compare
CCNA_01827 +1.5 6.5 cobyric acid synthase CobQ compare
CCNA_00756 +1.5 3.6 hypothetical protein compare
CCNA_03959 +1.5 1.2 hypothetical protein compare
CCNA_01058 +1.5 4.4 helix-turn-helix transcriptional regulator compare
CCNA_03372 +1.5 3.8 bacterioferritin-associated ferredoxin compare
CCNA_01393 +1.5 10.6 soluble lytic murein transglycosylase compare
CCNA_01681 +1.5 5.1 RimI-like acetyltransferase compare
CCNA_01826 +1.5 8.4 vitamin B12 receptor compare
CCNA_02910 +1.4 11.3 TonB-dependent receptor compare
CCNA_02297 +1.4 6.2 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_03688 +1.4 7.4 AsnC-family transcriptional regulator compare
CCNA_01505 +1.4 3.1 hypothetical protein compare
CCNA_01339 +1.4 5.6 ArsR-family transcriptional regulator compare
CCNA_01926 +1.4 6.4 GGDEF diguanylate cyclase DgcB compare
CCNA_02644 +1.4 3.8 cell division protein FtsL compare
CCNA_03214 +1.4 6.9 hypothetical protein compare
CCNA_02728 +1.4 7.1 hypothetical protein compare
CCNA_01680 +1.4 8.7 succinylarginine dihydrolase compare
CCNA_00705 +1.4 4.1 hypothetical protein compare
CCNA_02732 +1.4 3.6 hypothetical protein compare
CCNA_00162 +1.4 6.7 hypothetical protein compare
CCNA_01242 +1.4 12.0 amino acid permease compare
CCNA_00998 +1.4 6.2 ROS/MUCR transcriptional regulator compare
CCNA_01011 +1.4 5.9 imidazolonepropionase compare
CCNA_01949 +1.4 3.8 bactofilin A BacA compare
CCNA_02324 +1.4 7.8 heat shock protein 33 hsp33 compare
CCNA_03612 +1.4 6.5 HTH XRE-family transcriptional regulator compare
CCNA_00834 +1.4 5.4 flagellin FljM compare
CCNA_03379 +1.4 2.4 Cro/CI family transcriptional regulator compare
CCNA_00207 +1.4 6.4 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_02976 +1.4 5.9 MCP-signal associated domain protein compare
CCNA_01414 +1.4 7.8 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_01193 +1.3 9.8 amylosucrase compare
CCNA_02729 +1.3 10.1 oligopeptide transporter compare
CCNA_03849 +1.3 6.6 fructokinase compare
CCNA_00400 +1.3 5.5 MarR/EmrR-family transcriptional regulator compare
CCNA_02289 +1.3 7.8 MarR/EmrR family transcriptional regulator compare
CCNA_03089 +1.3 6.2 hypothetical protein compare
CCNA_01968 +1.3 3.2 pentapeptide repeats containing protein compare
CCNA_02475 +1.3 9.3 transcriptional regulator vanR compare
CCNA_01608 +1.3 5.7 TetR-family transcriptional regulator compare
CCNA_03215 +1.3 7.8 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_02249 +1.3 5.1 conserved hypothetical cytosolic protein compare
CCNA_00675 +1.3 5.7 VapC-like PIN domain ribonuclease compare
CCNA_01596 +1.3 5.2 DNA helicase II compare
CCNA_03808 +1.3 7.1 organic solvent resistance transport system Ttg2C protein compare
CCNA_03105 +1.3 6.5 DnaJ domain protein compare
CCNA_01338 +1.3 6.2 glyoxalase family protein compare
CCNA_02330 +1.3 4.8 hypothetical protein compare
CCNA_03107 +1.3 7.5 cytidine deaminase compare
CCNA_00803 +1.3 5.0 chemotaxis protein cheW compare
CCNA_01276 +1.3 2.7 cytochrome c5 compare
CCNA_02854 +1.3 4.7 two-component response regulator compare
CCNA_03622 +1.3 6.7 beta-lactamase repressor compare
CCNA_02687 +1.3 6.4 serine-pyruvate aminotransferase compare
CCNA_02180 +1.3 1.1 iron-sulfur cluster assembly/repair protein ApbC compare
CCNA_03964 +1.3 2.5 hypothetical protein compare
CCNA_02063 +1.3 5.2 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_03391 +1.3 7.3 Cro/CI family transcriptional regulator compare
CCNA_01420 +1.3 4.8 NrdR family transcriptional regulator compare
CCNA_01008 +1.3 8.6 urocanate hydratase compare
CCNA_02151 +1.3 4.0 exodeoxyribonuclease VII small subunit compare
CCNA_00368 +1.3 7.2 phosphonates transport system permease protein phnE compare
CCNA_02761 +1.3 3.9 hypothetical protein compare
CCNA_03954 +1.3 1.6 hypothetical protein compare
CCNA_00447 +1.3 6.1 chemotaxis protein cheD compare
CCNA_03420 +1.3 7.3 hypothetical protein compare
CCNA_01025 +1.2 7.1 hypothetical protein compare
CCNA_00441 +1.2 5.9 chemotaxis receiver domain protein cheYI compare
CCNA_03944 +1.2 1.0 hypothetical protein compare
CCNA_01731 +1.2 5.7 colicin V production protein CvpA compare
CCNA_01266 +1.2 6.7 NTF2 superfamily protein compare
CCNA_00931 +1.2 7.8 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_00210 +1.2 9.1 TonB-dependent receptor compare
CCNA_01415 +1.2 8.9 methyltransferase compare
CCNA_02338 +1.2 7.0 hypothetical protein compare
CCNA_02273 +1.2 4.1 glutathione peroxidase compare
CCNA_02363 +1.2 6.2 hypothetical protein compare
CCNA_01533 +1.2 5.2 hypothetical protein compare
CCNA_02419 +1.2 4.4 TonB1 protein compare
CCNA_02614 +1.2 5.9 fumarylacetoacetase superfamily protein compare
CCNA_02012 +1.2 6.9 metal-dependent hydrolase compare
CCNA_01173 +1.2 5.5 chorismate mutase compare
CCNA_00992 +1.2 7.8 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Caulobacter crescentus NA1000

For carbon source N-Acetyl-D-Glucosamine across organisms