Experiment set1IT029 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Nalidixic acid sodium salt 12.5 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1556 -3.5 -2.4 hypothetical protein compare
Psyr_4009 -3.4 -8.2 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4008 -3.4 -17.1 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_1408 -3.3 -2.2 Holliday junction endonuclease RuvC compare
Psyr_0550 -3.2 -6.3 Protein of unknown function UPF0227 compare
Psyr_1613 -3.1 -3.0 septum site-determining protein MinC compare
Psyr_0383 -3.1 -2.7 Twin-arginine translocation protein TatB compare
Psyr_0014 -3.1 -5.1 lipid A biosynthesis acyltransferase compare
Psyr_1544 -3.1 -3.6 SirA-like protein compare
Psyr_4140 -3.1 -4.0 Protein of unknown function DUF140 compare
Psyr_4007 -3.0 -10.7 Secretion protein HlyD compare
Psyr_3691 -3.0 -6.6 conserved hypothetical protein compare
Psyr_4887 -2.9 -13.9 Peptidase S41A, C-terminal protease compare
Psyr_1410 -2.9 -4.4 Holliday junction DNA helicase RuvB compare
Psyr_1268 -2.9 -6.6 extracellular solute-binding protein, family 3:SLT compare
Psyr_4991 -2.8 -1.9 hypothetical protein compare
Psyr_2184 -2.8 -2.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_4740 -2.7 -7.6 thiazole-phosphate synthase compare
Psyr_4138 -2.6 -4.2 Toluene tolerance compare
Psyr_4141 -2.6 -5.4 ABC transporter compare
Psyr_4144 -2.5 -2.0 Protein of unknown function DUF1239 compare
Psyr_0947 -2.5 -8.3 TPR repeat protein:TPR repeat protein compare
Psyr_1935 -2.4 -5.9 Protein of unknown function DUF796 compare
Psyr_0475 -2.4 -3.8 Protein of unknown function YGGT compare
Psyr_1614 -2.4 -3.5 lipid A biosynthesis acyltransferase compare
Psyr_0215 -2.3 -11.4 Exodeoxyribonuclease III xth compare
Psyr_1378 -2.3 -1.6 RecA protein compare
Psyr_0259 -2.3 -4.7 Osmolarity sensor protein envZ compare
Psyr_4341 -2.3 -7.0 thiamine-phosphate diphosphorylase compare
Psyr_0184 -2.2 -4.5 Protein of unknown function DUF484 compare
Psyr_2848 -2.2 -4.0 hypothetical protein compare
Psyr_1584 -2.2 -8.9 Aspartyl/Asparaginyl beta-hydroxylase conserved
Psyr_2847 -2.2 -2.4 hypothetical protein compare
Psyr_4019 -2.1 -5.1 H-NS family protein MvaT compare
Psyr_1751 -2.1 -4.6 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0524 -2.1 -3.7 Lipopolysaccharide kinase compare
Psyr_4139 -2.1 -6.0 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_4340 -2.0 -8.0 phosphomethylpyrimidine kinase, putative compare
Psyr_1372 -2.0 -4.3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_3806 -2.0 -4.9 hypothetical protein compare
Psyr_0951 -1.9 -3.3 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_RNA61 -1.9 -4.0 tRNA-Gly compare
Psyr_2641 -1.9 -2.8 hypothetical protein compare
Psyr_2227 -1.9 -1.9 conserved hypothetical protein compare
Psyr_4197 -1.8 -9.4 DNA replication and repair protein RecN conserved
Psyr_4087 -1.8 -2.2 Protein of unknown function DUF520 compare
Psyr_4015 -1.8 -2.8 conserved domain protein compare
Psyr_4203 -1.8 -2.5 SsrA-binding protein compare
Psyr_0202 -1.8 -8.4 transcriptional regulator, LysR family compare
Psyr_2182 -1.8 -4.9 hypothetical protein compare
Psyr_4408 -1.8 -7.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3213 -1.7 -2.5 Propeptide, PepSY amd peptidase M4 compare
Psyr_3808 -1.7 -1.5 hypothetical protein compare
Psyr_3127 -1.7 -3.3 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3970 -1.6 -7.4 Uracil-DNA glycosylase conserved
Psyr_0849 -1.6 -9.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2977 -1.6 -3.4 cointegrate resolution protein T compare
Psyr_3450 -1.6 -3.0 Hpt compare
Psyr_1931 -1.6 -4.3 hypothetical protein compare
Psyr_2899 -1.6 -4.3 conserved hypothetical protein compare
Psyr_2757 -1.6 -2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2345 -1.6 -4.3 ea59 protein compare
Psyr_3640 -1.6 -2.3 conserved hypothetical protein compare
Psyr_1885 -1.6 -2.1 hypothetical protein compare
Psyr_1930 -1.6 -3.3 hypothetical protein compare
Psyr_2112 -1.5 -1.6 Protein with unknown function DUF469 compare
Psyr_3342 -1.5 -1.7 conserved hypothetical protein compare
Psyr_1952 -1.5 -2.0 hypothetical protein compare
Psyr_1599 -1.5 -8.3 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A compare
Psyr_1259 -1.5 -5.7 Exodeoxyribonuclease VII large subunit conserved
Psyr_0528 -1.5 -2.5 Carbamoyltransferase compare
Psyr_2756 -1.5 -4.4 Molybdenum ABC transporter, periplasmic binding protein compare
Psyr_1555 -1.5 -3.7 Cobyrinic acid a,c-diamide synthase compare
Psyr_5065 -1.5 -7.5 ATP-dependent DNA helicase UvrD compare
Psyr_1588 -1.4 -2.9 Putative exonuclease, RdgC compare
Psyr_0201 -1.4 -6.4 ATP-dependent DNA helicase RecG compare
Psyr_3088 -1.4 -3.5 Glycosyl transferase, group 1 compare
Psyr_2327 -1.4 -2.4 GTP cyclohydrolase subunit MoaA compare
Psyr_2249 -1.4 -2.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2664 -1.4 -4.4 hypothetical protein compare
Psyr_4512 -1.4 -4.9 putative phage-related protein compare
Psyr_0525 -1.4 -5.4 Lipopolysaccharide kinase compare
Psyr_2243 -1.4 -2.8 Endoribonuclease L-PSP compare
Psyr_1460 -1.4 -3.9 hypothetical protein compare
Psyr_1250 -1.4 -3.0 conserved hypothetical protein compare
Psyr_1424 -1.4 -2.4 Peptidase S24, S26A and S26B compare
Psyr_0402 -1.3 -10.5 Peptidoglycan glycosyltransferase compare
Psyr_3377 -1.3 -2.0 transcriptional regulator, MarR family compare
Psyr_4091 -1.3 -4.5 8-oxo-dGTPase compare
Psyr_2502 -1.3 -2.7 conserved hypothetical protein compare
Psyr_1373 -1.3 -2.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2860 -1.3 -2.2 hypothetical protein compare
Psyr_2282 -1.3 -6.4 Hydrophobe/amphiphile efflux-1 HAE1 conserved
Psyr_2520 -1.3 -1.3 SOS-response transcriptional repressor, LexA compare
Psyr_2346 -1.3 -3.6 conserved hypothetical protein compare
Psyr_3137 -1.3 -6.1 ATPase compare
Psyr_1357 -1.3 -2.9 RNase HII compare
Psyr_0303 -1.3 -4.3 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_1910 -1.3 -3.6 VacJ-like lipoprotein compare
Psyr_0239 -1.3 -3.7 cytochrome c5 compare
Psyr_3702 -1.3 -1.3 Arsenate reductase compare
Psyr_2269 -1.2 -3.1 GTP cyclohydrolase I compare
Psyr_2620 -1.2 -1.6 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3055 -1.2 -1.9 Aminoglycoside phosphotransferase compare
Psyr_2546 -1.2 -3.0 DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump compare
Psyr_2943 -1.2 -3.5 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_0294 -1.2 -4.2 Exopolyphosphatase compare
Psyr_4789 -1.2 -3.1 lipoprotein, putative compare
Psyr_2378 -1.2 -2.9 transcriptional regulator, TetR family compare
Psyr_2448 -1.2 -3.3 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_2320 -1.2 -4.5 YD repeat protein compare
Psyr_0535 -1.2 -1.7 toluene tolerance protein, putative compare
Psyr_3089 -1.2 -8.5 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_2347 -1.2 -2.0 hypothetical protein compare
Psyr_3341 -1.2 -3.5 hypothetical protein compare
Psyr_2737 -1.2 -2.2 hypothetical protein compare
Psyr_3566 -1.2 -3.3 transcriptional regulator, AraC family compare
Psyr_3673 -1.2 -1.5 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_2837 -1.2 -5.9 hypothetical protein compare
Psyr_3728 -1.2 -3.1 hypothetical protein compare
Psyr_3854 -1.2 -1.0 OmpA/MotB compare
Psyr_2854 -1.2 -3.3 conserved hypothetical protein compare
Psyr_1543 -1.1 -5.5 Peptidase M48, Ste24p compare
Psyr_2488 -1.1 -1.9 hypothetical protein compare
Psyr_3284 -1.1 -2.3 SOS cell division inhibitor SulA compare
Psyr_4039 -1.1 -3.8 Protein of unknown function DUF796 compare
Psyr_3040 -1.1 -1.8 conserved hypothetical protein compare
Psyr_4610 -1.1 -4.6 phosphoglycolate phosphatase compare
Psyr_4351 -1.1 -3.0 conserved domain protein compare
Psyr_3807 -1.1 -3.7 hypothetical protein compare
Psyr_1280 -1.1 -3.0 Cytochrome c assembly protein compare
Psyr_1350 -1.1 -2.3 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_0579 -1.1 -7.4 RNAse R compare
Psyr_1417 -1.1 -3.6 TPR repeat protein compare
Psyr_3433 -1.1 -2.6 Protein-glutamate methylesterase compare
Psyr_1453 -1.1 -5.7 conserved hypothetical protein compare
Psyr_3740 -1.1 -4.2 Protein of unknown function DUF454 compare
Psyr_1286 -1.1 -4.3 tyrosine recombinase XerD subunit compare
Psyr_2984 -1.0 -1.8 conserved hypothetical protein compare
Psyr_3809 -1.0 -3.5 hypothetical protein compare
Psyr_1271 -1.0 -4.3 ErfK/YbiS/YcfS/YnhG compare
Psyr_3286 -1.0 -5.1 conserved hypothetical protein compare
Psyr_4336 -1.0 -2.0 ribosomal large subunit pseudouridine synthase E compare
Psyr_4480 -1.0 -1.7 outer membrane transport energization protein TonB compare
Psyr_2462 -1.0 -2.9 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0972 -1.0 -3.1 conserved hypothetical protein compare
Psyr_4380 -1.0 -2.1 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_3935 -1.0 -2.5 Short-chain dehydrogenase/reductase SDR compare
Psyr_1934 -1.0 -2.5 conserved hypothetical protein compare
Psyr_1748 -1.0 -3.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_2137 -1.0 -1.6 molybdopterin molybdochelatase compare
Psyr_2318 -1.0 -2.0 CDS compare
Psyr_3255 -1.0 -1.9 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_1924 -1.0 -3.0 hypothetical protein compare
Psyr_0784 -1.0 -1.9 CheW-like protein compare
Psyr_3028 -1.0 -1.1 Protein of unknown function DUF28 compare
Psyr_2283 -1.0 -2.9 Secretion protein HlyD compare
Psyr_3720 -1.0 -4.3 Filamentation induced by cAMP protein Fic compare
Psyr_2223 -1.0 -1.2 sarcosine oxidase, delta subunit compare
Psyr_4581 -1.0 -2.4 anthranilate synthase, component II compare
Psyr_2566 -1.0 -1.7 dihydroxyacetone kinase DhaK subunit compare
Psyr_1919 -1.0 -3.3 hypothetical protein compare
Psyr_2321 -0.9 -4.1 YD repeat protein compare
Psyr_2629 -0.9 -3.7 von Willebrand factor, type A compare
Psyr_0927 -0.9 -2.0 hypothetical protein compare
Psyr_2087 -0.9 -3.5 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) compare
Psyr_2642 -0.9 -2.5 hypothetical protein compare
Psyr_2842 -0.9 -3.9 hypothetical protein compare
Psyr_2617 -0.9 -1.3 Secretion protein HlyD compare
Psyr_1532 -0.9 -2.7 hypothetical protein compare
Psyr_5071 -0.9 -4.1 conserved hypothetical protein compare
Psyr_2430 -0.9 -2.9 NUDIX hydrolase compare
Psyr_3776 -0.9 -2.2 Cytosine deaminase compare
Psyr_4424 -0.9 -4.4 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_2095 -0.9 -2.9 Conserved TM helix compare
Psyr_4001 -0.9 -1.3 conserved domain protein compare
Psyr_0680 -0.9 -2.6 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_3084 -0.9 -2.1 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2601 -0.9 -3.9 regulatory protein, LuxR compare
Psyr_1889 -0.9 -3.0 type III effector HopH1 compare
Psyr_1846 -0.9 -3.2 hypothetical protein compare
Psyr_1932 -0.9 -4.0 CDS compare
Psyr_1758 -0.9 -5.1 extracellular solute-binding protein, family 5 compare
Psyr_1746 -0.9 -2.7 Trigger factor compare
Psyr_3759 -0.9 -4.8 conserved hypothetical protein compare
Psyr_1929 -0.9 -3.2 hypothetical protein compare
Psyr_3294 -0.9 -3.0 ABC transporter compare
Psyr_2092 -0.9 -1.8 Protein of unknown function 1935 compare
Psyr_2079 -0.9 -2.8 phosphoserine phosphatase / phosphoserine:homoserine phosphotransferase compare
Psyr_2670 -0.9 -3.4 Aminoglycoside/hydroxyurea antibiotic resistance kinase compare
Psyr_2872 -0.9 -1.5 hypothetical protein compare
Psyr_1925 -0.9 -3.7 diaminobutyrate aminotransferase apoenzyme compare
Psyr_5072 -0.9 -1.1 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2226 -0.9 -2.5 formyltetrahydrofolate deformylase compare
Psyr_3841 -0.9 -1.3 conserved hypothetical protein compare
Psyr_0185 -0.9 -4.3 tyrosine recombinase XerC subunit compare
Psyr_2692 -0.9 -2.5 Polysaccharide deacetylase compare
Psyr_1371 -0.9 -3.9 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_3090 -0.9 -1.5 hypothetical protein compare
Psyr_2114 -0.9 -2.5 two component transcriptional regulator, LuxR family compare


Specific Phenotypes

For 19 genes in this experiment

For stress Nalidixic acid sodium salt in Pseudomonas syringae pv. syringae B728a

For stress Nalidixic acid sodium salt across organisms