Experiment set1IT028 for Burkholderia phytofirmans PsJN

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
BPHYT_RS17680 -8.0 -5.5 imidazole glycerol phosphate synthase subunit HisF compare
BPHYT_RS09500 -7.7 -5.3 glucose-6-phosphate isomerase compare
BPHYT_RS17685 -7.3 -8.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BPHYT_RS17675 -7.3 -2.9 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS17395 -7.2 -2.8 anthranilate synthase subunit II compare
BPHYT_RS02610 -7.1 -6.9 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS33900 -6.7 -13.6 3-isopropylmalate dehydrogenase compare
BPHYT_RS33875 -6.6 -11.0 tryptophan synthase subunit alpha compare
BPHYT_RS03150 -6.6 -16.8 Phosphoglycerate dehydrogenase (EC:1.1.1.95) (from data) compare
BPHYT_RS18320 -6.5 -12.5 orotate phosphoribosyltransferase compare
BPHYT_RS17670 -6.5 -5.7 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
BPHYT_RS33835 -6.5 -9.9 O-succinylhomoserine sulfhydrylase compare
BPHYT_RS14915 -6.3 -7.7 phosphoserine aminotransferase compare
BPHYT_RS04285 -6.3 -4.2 rhamnosyltransferase compare
BPHYT_RS17890 -6.2 -4.1 shikimate kinase compare
BPHYT_RS12985 -6.1 -4.2 amino acid acetyltransferase compare
BPHYT_RS17855 -6.1 -16.1 glutamate synthase compare
BPHYT_RS33915 -6.0 -10.0 isopropylmalate isomerase compare
BPHYT_RS14845 -6.0 -4.1 cysteine synthase compare
BPHYT_RS33880 -6.0 -11.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS14910 -5.9 -10.2 chorismate mutase compare
BPHYT_RS17690 -5.9 -13.3 imidazole glycerol phosphate synthase compare
BPHYT_RS14855 -5.8 -3.8 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS06555 -5.7 -11.0 ketol-acid reductoisomerase compare
BPHYT_RS14190 -5.5 -11.8 carbamoyl phosphate synthase large subunit compare
BPHYT_RS15920 -5.5 -12.7 argininosuccinate synthase compare
BPHYT_RS14895 -5.5 -5.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS15915 -5.4 -13.5 ornithine carbamoyltransferase compare
BPHYT_RS04740 -5.4 -9.6 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS09515 -5.3 -6.3 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS06545 -5.3 -9.9 acetolactate synthase compare
BPHYT_RS08955 -5.3 -6.3 homoserine dehydrogenase compare
BPHYT_RS10100 -5.2 -7.2 dihydroxy-acid dehydratase compare
BPHYT_RS04725 -5.2 -12.5 sulfite reductase compare
BPHYT_RS06610 -5.2 -2.9 triosephosphate isomerase compare
BPHYT_RS17885 -5.2 -8.6 3-dehydroquinate synthase compare
BPHYT_RS17405 -5.1 -2.0 indole-3-glycerol phosphate synthase compare
BPHYT_RS06175 -5.1 -6.3 LPS biosynthesis compare
BPHYT_RS17390 -5.0 -12.9 anthranilate synthase subunit I compare
BPHYT_RS08960 -5.0 -3.3 threonine synthase compare
BPHYT_RS12055 -5.0 -18.6 phosphoenolpyruvate synthase compare
BPHYT_RS17400 -4.9 -5.9 anthranilate phosphoribosyltransferase compare
BPHYT_RS05225 -4.9 -9.8 phosphoenolpyruvate carboxylase compare
BPHYT_RS13705 -4.7 -4.9 chorismate synthase compare
BPHYT_RS03640 -4.7 -4.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS06900 -4.6 -7.9 aspartate aminotransferase compare
BPHYT_RS17715 -4.6 -7.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS16735 -4.6 -9.3 phosphogluconate dehydratase compare
BPHYT_RS17700 -4.6 -5.4 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS12530 -4.6 -4.9 ATP phosphoribosyltransferase regulatory subunit compare
BPHYT_RS04955 -4.6 -3.5 methionyl-tRNA synthetase compare
BPHYT_RS33865 -4.5 -12.7 tryptophan synthase alpha chain compare
BPHYT_RS16255 -4.5 -6.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS01595 -4.5 -8.5 homoserine O-acetyltransferase compare
BPHYT_RS16675 -4.4 -3.0 dihydroorotase compare
BPHYT_RS16840 -4.4 -3.0 transketolase compare
BPHYT_RS05020 -4.4 -10.8 glucose-6-phosphate 1-dehydrogenase compare
BPHYT_RS16905 -4.3 -6.0 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS33645 -4.3 -4.4 homoserine kinase compare
BPHYT_RS16245 -4.3 -7.3 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS04340 -4.2 -6.4 hypothetical protein compare
BPHYT_RS02735 -4.0 -6.6 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) conserved
BPHYT_RS06405 -4.0 -7.4 phosphoribosylamine--glycine ligase compare
BPHYT_RS33840 -4.0 -7.5 amidophosphoribosyltransferase compare
BPHYT_RS06190 -3.9 -4.6 heptosyltransferase compare
BPHYT_RS06685 -3.9 -4.6 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS08565 -3.8 -1.9 dihydroorotate dehydrogenase compare
BPHYT_RS04365 -3.8 -8.5 membrane protein compare
BPHYT_RS04730 -3.7 -4.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS06045 -3.6 -11.5 transaldolase compare
BPHYT_RS04720 -3.6 -5.4 transcriptional regulator compare
BPHYT_RS03535 -3.6 -6.5 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BPHYT_RS04965 -3.4 -10.6 ATP-binding protein compare
BPHYT_RS13220 -3.3 -9.6 phosphomethylpyrimidine synthase compare
BPHYT_RS03725 -3.3 -3.1 serine hydroxymethyltransferase compare
BPHYT_RS04385 -3.3 -6.6 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS14195 -3.3 -4.2 carbamoyl phosphate synthase small subunit compare
BPHYT_RS16835 -3.2 -9.4 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS02730 -3.1 -12.4 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) conserved
BPHYT_RS03625 -2.8 -10.4 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS08850 -2.8 -2.8 transcriptional regulator compare
BPHYT_RS14055 -2.7 -15.7 aldose epimerase compare
BPHYT_RS04745 -2.7 -3.7 sulfate adenylyltransferase compare
BPHYT_RS02590 -2.7 -11.7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS02745 -2.6 -6.7 N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data) conserved
BPHYT_RS04370 -2.6 -3.2 glycosyl transferase compare
BPHYT_RS03570 -2.4 -10.9 heat-inducible transcription repressor HrcA compare
BPHYT_RS04350 -2.4 -11.9 membrane protein compare
BPHYT_RS02740 -2.4 -7.0 N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) conserved
BPHYT_RS29630 -2.3 -3.5 SAM-dependent methyltransferase compare
BPHYT_RS04290 -2.3 -2.9 glycosyl transferase family 2 compare
BPHYT_RS12845 -2.3 -14.1 ATPase compare
BPHYT_RS23840 -2.2 -2.8 methyltransferase compare
BPHYT_RS03645 -2.2 -2.4 tRNA dimethylallyltransferase compare
BPHYT_RS01590 -2.2 -6.9 methionine biosynthesis protein MetW compare
BPHYT_RS16270 -2.1 -3.6 phosphoglycerate kinase compare
BPHYT_RS17520 -2.0 -5.1 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS12465 -2.0 -6.2 inositol monophosphatase compare
BPHYT_RS33920 -1.9 -7.9 type II citrate synthase compare
BPHYT_RS18340 -1.9 -2.3 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS09145 -1.8 -5.9 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS18705 -1.8 -1.7 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS09155 -1.7 -7.5 3-ketoacyl-ACP reductase compare
BPHYT_RS33905 -1.7 -0.9 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS15710 -1.6 -2.7 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS12840 -1.6 -3.7 pyruvate dehydrogenase compare
BPHYT_RS36275 -1.6 -2.9 hypothetical protein compare
BPHYT_RS05960 -1.6 -7.1 endoribonuclease L-PSP compare
BPHYT_RS08245 -1.5 -4.9 anti-sigma factor compare
BPHYT_RS24370 -1.5 -6.0 glucose-6-phosphate 1-dehydrogenase compare
BPHYT_RS12060 -1.4 -2.5 hypothetical protein compare
BPHYT_RS00770 -1.4 -1.6 conjugal transfer protein TraC compare
BPHYT_RS08950 -1.4 -3.7 aminotransferase compare
BPHYT_RS01485 -1.4 -1.4 histidine kinase compare
BPHYT_RS18760 -1.4 -4.0 flagellar biosynthesis protein FliT compare
BPHYT_RS17380 -1.4 -6.8 ribulose-phosphate 3-epimerase compare
BPHYT_RS16090 -1.4 -2.3 hypothetical protein compare
BPHYT_RS15615 -1.3 -2.6 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
BPHYT_RS04920 -1.3 -2.9 aspartate 1-decarboxylase compare
BPHYT_RS06195 -1.3 -2.0 membrane protein compare
BPHYT_RS33580 -1.3 -4.0 geranyltranstransferase compare
BPHYT_RS16065 -1.3 -1.3 LacI family transcriptional regulator compare
BPHYT_RS14920 -1.3 -1.4 hypothetical protein compare
BPHYT_RS17100 -1.3 -7.2 RNA pyrophosphohydrolase compare
BPHYT_RS07515 -1.2 -2.6 photosystem reaction center subunit H compare
BPHYT_RS14900 -1.2 -2.6 prephenate dehydrogenase compare
BPHYT_RS05705 -1.2 -1.5 hypothetical protein compare
BPHYT_RS15670 -1.2 -4.2 phosphoribosylglycinamide formyltransferase compare
BPHYT_RS35885 -1.2 -5.2 hypothetical protein compare
BPHYT_RS24685 -1.1 -1.8 LysR family transcriptional regulator compare
BPHYT_RS12150 -1.1 -8.4 PII uridylyl-transferase compare
BPHYT_RS08150 -1.1 -1.0 membrane protein compare
BPHYT_RS33990 -1.1 -1.0 ATPase compare
BPHYT_RS14400 -1.1 -3.0 anti-sigma factor compare
BPHYT_RS02725 -1.1 -2.3 GntR family transcriptional regulator compare
BPHYT_RS28705 -1.1 -1.6 IclR family transcriptional regulator compare
BPHYT_RS03620 -1.1 -5.4 poly(A) polymerase compare
BPHYT_RS06470 -1.1 -1.6 membrane protein compare
BPHYT_RS02570 -1.1 -5.3 phosphocarrier protein HPr compare
BPHYT_RS30720 -1.1 -2.4 hypothetical protein compare
BPHYT_RS33950 -1.1 -7.6 GntR family transcriptional regulator compare
BPHYT_RS26685 -1.1 -1.7 precorrin-8X methylmutase compare
BPHYT_RS35275 -1.0 -1.9 acetyltransferase compare
BPHYT_RS26390 -1.0 -1.2 antibiotic resistance protein compare
BPHYT_RS18280 -1.0 -5.0 TetR family transcriptional regulator compare
BPHYT_RS03330 -1.0 -3.0 hypothetical protein compare
BPHYT_RS12725 -1.0 -8.4 regulator compare
BPHYT_RS18990 -1.0 -2.9 chemotaxis protein compare
BPHYT_RS11540 -1.0 -2.9 ureidoglycolate hydrolase compare
BPHYT_RS22910 -1.0 -1.4 hypothetical protein compare
BPHYT_RS19115 -1.0 -3.1 acyl carrier protein compare
BPHYT_RS17905 -1.0 -2.0 fimbrial assembly family protein compare
BPHYT_RS04430 -1.0 -1.7 amino acid ABC transporter ATPase compare
BPHYT_RS21130 -1.0 -2.3 F420-dependent oxidoreductase compare
BPHYT_RS10765 -1.0 -1.5 amidase compare
BPHYT_RS02865 -0.9 -2.1 hypothetical protein compare
BPHYT_RS17095 -0.9 -2.9 proline--tRNA ligase compare
BPHYT_RS17945 -0.9 -1.7 cytochrome C biogenesis protein compare
BPHYT_RS11310 -0.9 -1.2 LysR family transcriptional regulator compare
BPHYT_RS16975 -0.9 -3.2 shikimate 5-dehydrogenase compare
BPHYT_RS02540 -0.9 -1.5 hypothetical protein compare
BPHYT_RS13610 -0.9 -2.1 MerR family transcriptional regulator compare
BPHYT_RS19570 -0.9 -6.9 sodium/hydrogen exchanger compare
BPHYT_RS05030 -0.9 -2.8 sugar ABC transporter permease compare
BPHYT_RS01660 -0.9 -2.6 hypothetical protein compare
BPHYT_RS10690 -0.9 -3.0 Rieske (2Fe-2S) protein compare
BPHYT_RS29645 -0.9 -3.4 hypothetical protein compare
BPHYT_RS18615 -0.9 -3.2 5-formyltetrahydrofolate cyclo-ligase compare
BPHYT_RS06075 -0.8 -4.0 hypothetical protein compare
BPHYT_RS17265 -0.8 -1.4 cell division protein compare
BPHYT_RS08945 -0.8 -5.2 hypothetical protein compare
BPHYT_RS29185 -0.8 -1.8 sugar ABC transporter permease compare
BPHYT_RS29255 -0.8 -2.3 aspartate carbamoyltransferase compare
BPHYT_RS02480 -0.8 -1.3 alkaline phosphatase compare
BPHYT_RS10950 -0.8 -1.9 transcriptional regulator compare
BPHYT_RS06410 -0.8 -1.3 transcriptional regulator compare
BPHYT_RS17530 -0.8 -3.8 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS19565 -0.8 -5.0 gamma-glutamyl:cysteine ligase compare
BPHYT_RS34410 -0.8 -1.1 hypothetical protein compare
BPHYT_RS29640 -0.8 -2.2 NAD-dependent deacetylase compare
BPHYT_RS18765 -0.8 -3.9 flagellar biosynthesis protein FliS compare
BPHYT_RS15865 -0.8 -1.6 exodeoxyribonuclease VII large subunit compare
BPHYT_RS06435 -0.8 -1.6 hypothetical protein compare
BPHYT_RS01455 -0.8 -0.8 peptide deformylase compare
BPHYT_RS16345 -0.8 -3.9 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS07000 -0.8 -5.8 acetyl-CoA synthetase compare
BPHYT_RS11825 -0.8 -1.2 cytosine deaminase compare
BPHYT_RS15950 -0.7 -3.5 tyrosine recombinase XerD compare
BPHYT_RS21485 -0.7 -1.0 hypothetical protein compare
BPHYT_RS34900 -0.7 -0.6 hypothetical protein compare
BPHYT_RS03580 -0.7 -2.8 RNA-binding protein S4 compare
BPHYT_RS02690 -0.7 -5.0 protoheme IX farnesyltransferase compare
BPHYT_RS09650 -0.7 -1.7 hypothetical protein compare
BPHYT_RS17035 -0.7 -1.6 sugar kinase compare
BPHYT_RS13645 -0.7 -6.0 threonine--tRNA ligase compare
BPHYT_RS08525 -0.7 -1.1 SAM-dependent methyltransferase compare
BPHYT_RS05880 -0.7 -1.7 hypothetical protein compare
BPHYT_RS12535 -0.7 -0.8 membrane protein compare
BPHYT_RS20840 -0.7 -2.2 beta-lactamase compare
BPHYT_RS26820 -0.7 -1.5 LysR family transcriptional regulator compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Burkholderia phytofirmans PsJN

For carbon source N-Acetyl-D-Glucosamine across organisms