Experiment set1IT028 for Burkholderia phytofirmans PsJN

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS18825 +1.5 5.5 flagellar biosynthesis protein FliP compare
BPHYT_RS03655 +1.4 2.4 membrane protein compare
BPHYT_RS14255 +1.3 11.2 ABC transporter compare
BPHYT_RS18775 +1.3 9.8 flagellar M-ring protein FliF compare
BPHYT_RS18935 +1.3 7.1 flagellar biosynthesis regulator FlhF compare
BPHYT_RS18890 +1.2 8.4 flagellar basal body rod protein FlgC compare
BPHYT_RS01795 +1.2 8.4 histidine kinase compare
BPHYT_RS02765 +1.1 5.4 cytochrome BD oxidase subunit I compare
BPHYT_RS18895 +1.1 5.3 flagellar basal body rod protein FlgB compare
BPHYT_RS18880 +1.1 7.8 flagellar hook protein FlgE compare
BPHYT_RS15320 +1.1 1.5 hypothetical protein compare
BPHYT_RS18945 +1.1 7.3 flagellar biosynthesis protein FlhB compare
BPHYT_RS27410 +1.1 3.2 amidohydrolase compare
BPHYT_RS18785 +1.1 2.8 flagellar assembly protein FliH compare
BPHYT_RS18925 +1.1 8.9 RNA polymerase sigma70 compare
BPHYT_RS18875 +1.1 7.1 flagellar basal body rod protein FlgF compare
BPHYT_RS18780 +1.1 6.1 flagellar motor switch protein FliG compare
BPHYT_RS18870 +1.1 7.5 flagellar basal body rod protein FlgG compare
BPHYT_RS05905 +1.0 1.3 hypothetical protein compare
BPHYT_RS18860 +1.0 5.0 flagellar P-ring protein FlgI compare
BPHYT_RS18940 +1.0 7.8 flagellar biosynthesis protein FlhA compare
BPHYT_RS14250 +1.0 6.7 glycosyl transferase compare
BPHYT_RS05010 +1.0 5.9 RpiR family transcriptional regulator compare
BPHYT_RS09895 +1.0 2.1 LysR family transcriptional regulator compare
BPHYT_RS18790 +1.0 6.9 ATP synthase compare
BPHYT_RS27560 +1.0 1.6 histidine kinase compare
BPHYT_RS18830 +1.0 7.0 flagellar biosynthesis protein FliQ compare
BPHYT_RS02965 +1.0 2.3 membrane protein compare
BPHYT_RS18810 +1.0 7.1 flagellar motor switch protein FliM compare
BPHYT_RS18885 +1.0 6.7 flagellar basal body rod modification protein FlgD compare
BPHYT_RS01790 +1.0 9.1 LuxR family transcriptional regulator compare
BPHYT_RS02180 +1.0 1.6 hypothetical protein compare
BPHYT_RS18855 +1.0 6.6 flagellar rod assembly protein FlgJ compare
BPHYT_RS18900 +0.9 7.8 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS21215 +0.9 4.5 Crp/Fnr family transcriptional regulator compare
BPHYT_RS31760 +0.9 3.7 aryldialkylphosphatase compare
BPHYT_RS18835 +0.9 1.8 flagellar biosynthesis protein FliR compare
BPHYT_RS18800 +0.9 6.4 flagellar hook-length control protein compare
BPHYT_RS08000 +0.9 2.4 antibiotic biosynthesis monooxygenase compare
BPHYT_RS06335 +0.9 1.8 CopG family transcriptional regulator compare
BPHYT_RS03875 +0.8 2.4 dehydrogenase compare
BPHYT_RS31840 +0.8 1.7 anhydrase compare
BPHYT_RS26465 +0.8 1.6 metallophosphoesterase compare
BPHYT_RS20880 +0.8 1.2 polyketide cyclase compare
BPHYT_RS18795 +0.8 4.2 flagellar export protein FliJ compare
BPHYT_RS10475 +0.8 1.7 mammalian cell entry protein compare
BPHYT_RS07080 +0.8 1.8 glutathione S-transferase compare
BPHYT_RS18865 +0.8 1.6 flagellar L-ring protein FlgH compare
BPHYT_RS35310 +0.8 0.9 GCN5 family N-acetyltransferase compare
BPHYT_RS07815 +0.8 2.9 phosphonate transporter compare
BPHYT_RS04010 +0.8 1.6 glycosyl transferase compare
BPHYT_RS10945 +0.8 1.7 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS29620 +0.8 1.1 hypothetical protein compare
BPHYT_RS25070 +0.8 1.7 choline ABC transporter permease compare
BPHYT_RS12825 +0.8 2.9 phasin family protein compare
BPHYT_RS10470 +0.8 2.8 hypothetical protein compare
BPHYT_RS13390 +0.7 1.3 IclR family transcriptional regulator compare
BPHYT_RS25240 +0.7 2.9 choline-sulfatase compare
BPHYT_RS19025 +0.7 3.7 transcriptional regulator compare
BPHYT_RS29365 +0.7 1.6 ATP-NAD kinase compare
BPHYT_RS02770 +0.7 3.6 membrane protein compare
BPHYT_RS02975 +0.7 2.1 membrane protein compare
BPHYT_RS19835 +0.7 3.5 XRE family transcriptional regulator compare
BPHYT_RS01730 +0.7 1.7 serine/threonine protein kinase compare
BPHYT_RS11970 +0.7 1.4 cupin compare
BPHYT_RS34745 +0.7 1.3 hypothetical protein compare
BPHYT_RS28930 +0.7 1.1 chromosome partitioning protein ParA compare
BPHYT_RS10915 +0.7 1.9 radical SAM protein compare
BPHYT_RS05420 +0.7 1.2 glutathione S-transferase compare
BPHYT_RS23705 +0.7 5.2 hypothetical protein compare
BPHYT_RS05520 +0.7 3.4 transcriptional regulator compare
BPHYT_RS29485 +0.7 0.9 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS33615 +0.7 2.0 decarboxylase compare
BPHYT_RS12820 +0.7 2.4 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS03280 +0.7 1.5 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS18805 +0.6 2.2 flagellar basal body protein FliL compare
BPHYT_RS08385 +0.6 1.4 secretion protein compare
BPHYT_RS22420 +0.6 1.2 membrane protein compare
BPHYT_RS25630 +0.6 2.3 glutathione S-transferase compare
BPHYT_RS22030 +0.6 2.3 peptide ABC transporter ATP-binding protein compare
BPHYT_RS08615 +0.6 1.1 hypothetical protein compare
BPHYT_RS29175 +0.6 1.4 ABC transporter ATP-binding protein compare
BPHYT_RS21445 +0.6 1.3 sugar ABC transporter ATP-binding protein compare
BPHYT_RS25285 +0.6 1.5 AraC family transcriptional regulator compare
BPHYT_RS32240 +0.6 1.2 chromosome replication initiation inhibitor protein compare
BPHYT_RS29820 +0.6 1.4 hypothetical protein compare
BPHYT_RS36185 +0.6 1.8 hypothetical protein compare
BPHYT_RS05835 +0.6 2.7 hypothetical protein compare
BPHYT_RS22870 +0.6 1.2 copper transporter compare
BPHYT_RS20060 +0.6 1.2 hypothetical protein compare
BPHYT_RS30745 +0.6 0.9 hypothetical protein compare
BPHYT_RS08770 +0.6 1.8 universal stress protein A compare
BPHYT_RS10465 +0.6 3.3 hypothetical protein compare
BPHYT_RS22930 +0.6 1.5 type II secretion system protein compare
BPHYT_RS23170 +0.6 2.5 XRE family transcriptional regulator compare
BPHYT_RS30055 +0.6 1.7 hypothetical protein compare
BPHYT_RS24730 +0.6 1.2 AraC family transcriptional regulator compare
BPHYT_RS25970 +0.6 1.0 urea amidolyase compare
BPHYT_RS02010 +0.6 1.5 copper homeostasis protein CutC compare
BPHYT_RS23370 +0.6 1.4 glycosyl transferase family 1 compare
BPHYT_RS35535 +0.6 1.7 arsenic transporter compare
BPHYT_RS10995 +0.6 1.1 GntR family transcriptional regulator compare
BPHYT_RS16180 +0.6 1.0 TetR family transcriptional regulator compare
BPHYT_RS29810 +0.6 1.1 hexapeptide transferase compare
BPHYT_RS09885 +0.6 1.4 isomerase compare
BPHYT_RS10750 +0.6 1.0 LysR family transcriptional regulator compare
BPHYT_RS35675 +0.6 0.9 short-chain dehydrogenase compare
BPHYT_RS09310 +0.6 2.7 sensor histidine kinase compare
BPHYT_RS28025 +0.6 1.1 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS09480 +0.6 0.7 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS27860 +0.6 1.8 membrane protein compare
BPHYT_RS30870 +0.5 2.1 chromate transporter compare
BPHYT_RS29625 +0.5 4.3 6-phosphogluconate dehydrogenase compare
BPHYT_RS07595 +0.5 0.9 membrane protein compare
BPHYT_RS22740 +0.5 2.7 ABC transporter permease compare
BPHYT_RS21790 +0.5 1.3 hypothetical protein compare
BPHYT_RS01240 +0.5 1.6 hypothetical protein compare
BPHYT_RS34665 +0.5 1.6 hypothetical protein compare
BPHYT_RS24930 +0.5 1.8 cytochrome C oxidase subunit III compare
BPHYT_RS17030 +0.5 1.1 lipid hydroperoxide peroxidase compare
BPHYT_RS21505 +0.5 1.1 amidohydrolase compare
BPHYT_RS33805 +0.5 0.8 hypothetical protein compare
BPHYT_RS10430 +0.5 1.8 glycosyl transferase family 1 compare
BPHYT_RS25470 +0.5 1.2 alkylhydroperoxidase compare
BPHYT_RS35005 +0.5 2.1 molecular chaperone DnaJ compare
BPHYT_RS10040 +0.5 0.7 hypothetical protein compare
BPHYT_RS31225 +0.5 2.6 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS02720 +0.5 1.9 MarR family transcriptional regulator compare
BPHYT_RS05525 +0.5 2.6 sensor histidine kinase compare
BPHYT_RS01530 +0.5 1.5 penicillin-binding protein 2 compare
BPHYT_RS16815 +0.5 1.1 ureidoglycolate hydrolase compare
BPHYT_RS12440 +0.5 1.8 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS30465 +0.5 1.0 short-chain dehydrogenase compare
BPHYT_RS07110 +0.5 1.4 LysR family transcriptional regulator compare
BPHYT_RS16470 +0.5 2.0 DeoR faimly transcriptional regulator compare
BPHYT_RS33540 +0.5 2.0 hypothetical protein compare
BPHYT_RS25780 +0.5 0.8 DeoR faimly transcriptional regulator compare
BPHYT_RS03015 +0.5 0.7 aldolase compare
BPHYT_RS16445 +0.5 1.5 RNA helicase compare
BPHYT_RS24925 +0.5 1.1 cytochrome O ubiquinol oxidase compare
BPHYT_RS33045 +0.5 1.2 response regulator receiver protein compare
BPHYT_RS04060 +0.5 2.1 glycosyl transferase compare
BPHYT_RS28545 +0.5 2.4 acetamidase compare
BPHYT_RS25370 +0.5 1.6 acyl-CoA dehydrogenase compare
BPHYT_RS04585 +0.5 1.8 hypothetical protein compare
BPHYT_RS17185 +0.5 3.0 N-acetylglutamate synthase compare
BPHYT_RS08490 +0.5 1.8 Crp/Fnr family transcriptional regulator compare
BPHYT_RS07425 +0.5 1.3 hypothetical protein compare
BPHYT_RS28740 +0.5 1.6 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
BPHYT_RS09735 +0.5 1.1 glycosyl transferase compare
BPHYT_RS05515 +0.5 2.0 hypothetical protein compare
BPHYT_RS12520 +0.5 2.4 nicotinate phosphoribosyltransferase compare
BPHYT_RS11505 +0.5 2.4 sugar ABC transporter permease compare
BPHYT_RS10500 +0.5 1.1 acetolactate synthase compare
BPHYT_RS05155 +0.5 1.8 acetyltransferase GCN5 compare
BPHYT_RS30880 +0.5 1.9 peptidase S13 compare
BPHYT_RS13760 +0.5 2.1 hypothetical protein compare
BPHYT_RS34240 +0.5 1.6 ABC transporter for L-rhamnose/L-fucose/xylitol, permease component (from data) compare
BPHYT_RS30795 +0.5 0.9 short-chain dehydrogenase compare
BPHYT_RS23445 +0.5 1.0 hexuronate transporter compare
BPHYT_RS04750 +0.5 2.0 uroporphyrin-III C-methyltransferase compare
BPHYT_RS10440 +0.5 1.7 GntR family transcriptional regulator compare
BPHYT_RS23385 +0.5 1.2 group 1 glycosyl transferase compare
BPHYT_RS11215 +0.5 3.1 ribose ABC transporter ATPase compare
BPHYT_RS32540 +0.5 1.6 hypothetical protein compare
BPHYT_RS24740 +0.5 1.6 RNA polymerase subunit sigma-24 compare
BPHYT_RS18930 +0.5 2.0 flagellar biosynthesis protein FlhG compare
BPHYT_RS11640 +0.5 1.6 hypothetical protein compare
BPHYT_RS33060 +0.5 1.1 hypothetical protein compare
BPHYT_RS25605 +0.5 1.5 symporter compare
BPHYT_RS05845 +0.5 2.1 hypothetical protein compare
BPHYT_RS11230 +0.5 2.2 hypothetical protein compare
BPHYT_RS31020 +0.5 1.2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BPHYT_RS05840 +0.5 2.0 hypothetical protein compare
BPHYT_RS12830 +0.5 3.2 dihydrolipoamide dehydrogenase compare
BPHYT_RS06530 +0.5 0.7 membrane protein compare
BPHYT_RS07320 +0.5 1.1 dihydrodipicolinate synthetase compare
BPHYT_RS10320 +0.5 1.7 hypothetical protein compare
BPHYT_RS33740 +0.5 1.4 hypothetical protein compare
BPHYT_RS07190 +0.5 0.8 acetyltransferase compare
BPHYT_RS34300 +0.5 1.3 major facilitator transporter compare
BPHYT_RS22290 +0.5 2.5 membrane protein compare
BPHYT_RS10720 +0.5 0.4 hypothetical protein compare
BPHYT_RS28245 +0.5 1.2 MFS transporter compare
BPHYT_RS35980 +0.5 2.2 hypothetical protein compare
BPHYT_RS02760 +0.5 1.7 cytochrome BD oxidase subunit II compare
BPHYT_RS21470 +0.5 1.2 6-hydroxynicotinate reductase compare
BPHYT_RS30040 +0.5 0.9 hypothetical protein compare
BPHYT_RS15730 +0.5 2.6 isocitrate dehydrogenase compare
BPHYT_RS26415 +0.5 1.5 glutathione S-transferase compare
BPHYT_RS02885 +0.5 2.8 glmZ(sRNA)-inactivating NTPase compare
BPHYT_RS22640 +0.5 2.0 hydroxyproline-2-epimerase compare
BPHYT_RS03955 +0.5 2.2 glycosyl transferase compare
BPHYT_RS31030 +0.5 1.8 tyrosine protein kinase compare
BPHYT_RS29165 +0.5 1.9 hypothetical protein compare
BPHYT_RS32870 +0.5 1.8 hypothetical protein compare
BPHYT_RS07705 +0.4 1.4 arginine succinyltransferase compare
BPHYT_RS16515 +0.4 1.2 2-hydroxyacid dehydrogenase compare
BPHYT_RS33515 +0.4 3.0 porin compare
BPHYT_RS07480 +0.4 0.9 FAD-dependent oxidoreductase compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Burkholderia phytofirmans PsJN

For carbon source N-Acetyl-D-Glucosamine across organisms