Experiment set1IT027 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A with Doxycycline hyclate 0.0001 mg/ml

Genes with specific phenotypes:

  gene name fitness t score description  
RR42_RS32250 -4.8 -16.0 ABC transporter compare
RR42_RS36270 -4.1 -13.8 patatin conserved
RR42_RS20450 -4.1 -9.5 16S rRNA methyltransferase conserved
RR42_RS36665 -3.8 -9.6 hypothetical protein conserved
RR42_RS13030 -3.6 -16.8 ATP-dependent helicase conserved
RR42_RS04970 -3.6 -12.2 aspartyl beta-hydroxylase compare
RR42_RS32240 -3.2 -8.2 ABC transporter compare
RR42_RS00445 -3.1 -12.2 membrane protein compare
RR42_RS06580 -3.0 -6.5 aminoacrylate peracid reductase compare
RR42_RS01270 -2.3 -10.6 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase compare
RR42_RS02035 -2.2 -8.0 hypothetical protein compare
RR42_RS22455 -2.2 -11.3 2-aminoethylphosphonate aminotransferase compare
RR42_RS28595 -2.0 -12.1 squalene--hopene cyclase compare
RR42_RS22450 -1.9 -5.0 phosphonopyruvate decarboxylase compare
RR42_RS32225 -1.9 -7.9 NAD-dependent dehydratase compare
RR42_RS22445 -1.8 -9.1 phosphoenolpyruvate phosphomutase compare
RR42_RS25530 -1.6 -5.4 TetR family transcriptional regulator compare
RR42_RS20385 -1.4 -7.2 methyltransferase compare
RR42_RS02430 -1.3 -6.1 sodium:solute symporter compare
RR42_RS11370 -1.3 -6.0 ABC transporter ATP-binding protein compare
RR42_RS22430 -1.0 -5.3 2OG-Fe(II) oxygenase compare
RR42_RS36255 +1.0 5.8 LacI family transcriptional regulator compare
RR42_RS06475 +1.4 9.4 glycerol acyltransferase compare
RR42_RS06470 +1.4 6.7 hypothetical protein compare
RR42_RS32265 +1.6 6.5 phytoene synthase compare
RR42_RS15850 +1.9 13.8 glycerol acyltransferase compare
RR42_RS31185 +2.0 14.6 3-oxoacyl-ACP synthase compare
RR42_RS02745 +2.9 17.1 Xaa-Pro aminopeptidase compare
RR42_RS05020 +5.0 25.9 SAM-dependent methyltransferase conserved


Specific phenotypes for stress Doxycycline hyclate across organisms