Experiment set1IT022 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A with Vancomycin Hydrochloride Hydrate 0.5 mg/ml

200 most important genes:

  gene name fitness t score description  
RR42_RS04325 -5.0 -3.4 membrane protein compare
RR42_RS02775 -5.0 -3.4 molecular chaperone SurA compare
RR42_RS18270 -4.8 -3.3 murein transglycosylase compare
RR42_RS15455 -4.0 -5.4 membrane protein compare
RR42_RS15740 -3.8 -2.4 hypothetical protein compare
RR42_RS04895 -3.8 -14.6 serine/threonine protein phosphatase compare
RR42_RS18850 -3.7 -3.6 preprotein translocase subunit TatC compare
RR42_RS00830 -3.7 -7.4 cell division protein FtsN compare
RR42_RS07555 -3.5 -2.4 potassium transporter Kup compare
RR42_RS13910 -3.5 -8.6 glutamate racemase compare
RR42_RS33210 -3.4 -6.4 teichoic acid biosynthesis protein compare
RR42_RS18855 -3.4 -4.0 preprotein translocase compare
RR42_RS06255 -3.3 -3.5 lipoprotein compare
RR42_RS14480 -3.3 -4.8 hypothetical protein compare
RR42_RS05905 -3.3 -3.9 hypothetical protein compare
RR42_RS01260 -3.3 -10.6 lauroyl acyltransferase compare
RR42_RS06250 -3.2 -2.2 dihydrodipicolinate synthase compare
RR42_RS15475 -3.1 -6.5 protein tolQ compare
RR42_RS20440 -3.0 -1.7 histidine kinase compare
RR42_RS15470 -3.0 -1.5 biopolymer transporter ExbD compare
RR42_RS02030 -3.0 -3.4 membrane protein compare
RR42_RS13125 -2.9 -3.9 pyrrolo-quinoline quinone compare
RR42_RS19885 -2.8 -1.9 aminoglycoside transporter compare
RR42_RS33260 -2.8 -6.5 multidrug MFS transporter compare
RR42_RS02045 -2.8 -10.5 GTPase compare
RR42_RS33255 -2.8 -2.8 protein-tyrosine phosphatase compare
RR42_RS21220 -2.8 -2.5 iron transporter FeoB compare
RR42_RS05885 -2.8 -8.8 hypothetical protein compare
RR42_RS14965 -2.7 -4.1 hypothetical protein compare
RR42_RS15460 -2.7 -5.7 translocation protein TolB compare
RR42_RS33250 -2.7 -6.9 tyrosine protein kinase compare
RR42_RS05790 -2.7 -7.0 lipoprotein compare
RR42_RS01255 -2.6 -6.5 lauroyl acyltransferase compare
RR42_RS04320 -2.6 -5.7 cell division protein FtsK compare
RR42_RS08945 -2.6 -1.4 hypothetical protein compare
RR42_RS06020 -2.5 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
RR42_RS06630 -2.5 -1.3 integration host factor subunit alpha compare
RR42_RS21435 -2.4 -2.7 hypothetical protein compare
RR42_RS33240 -2.4 -13.2 GDP-L-fucose synthase compare
RR42_RS09590 -2.4 -2.3 hypothetical protein compare
RR42_RS14985 -2.3 -1.8 30S ribosomal protein S21 compare
RR42_RS17865 -2.3 -8.2 N-acetyl-anhydromuranmyl-L-alanine amidase compare
RR42_RS26935 -2.3 -4.6 farnesyl-diphosphate farnesyltransferase compare
RR42_RS20205 -2.3 -3.8 chromosome partitioning protein compare
RR42_RS01095 -2.3 -2.0 membrane protein compare
RR42_RS16950 -2.3 -6.2 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
RR42_RS14755 -2.3 -4.5 hypothetical protein compare
RR42_RS15525 -2.3 -1.5 hypothetical protein compare
RR42_RS32740 -2.3 -1.2 enoyl-CoA hydratase compare
RR42_RS05420 -2.3 -4.2 membrane protein compare
RR42_RS15790 -2.3 -6.6 aminotransferase class III compare
RR42_RS03415 -2.2 -5.2 N-acetylmuramoyl-L-alanine amidase compare
RR42_RS32240 -2.2 -7.7 ABC transporter compare
RR42_RS09555 -2.2 -2.5 universal stress protein UspA compare
RR42_RS13040 -2.2 -5.7 iron transporter compare
RR42_RS33235 -2.1 -7.4 GDP-mannose 4,6-dehydratase compare
RR42_RS33245 -2.1 -5.8 mannose-1-phosphate guanyltransferase compare
RR42_RS15800 -2.1 -4.4 aldo/keto reductase compare
RR42_RS01185 -2.1 -12.8 muropeptide transporter compare
RR42_RS06345 -2.0 -4.0 hypothetical protein compare
RR42_RS17560 -2.0 -6.2 Fur family transcriptional regulator compare
RR42_RS18420 -2.0 -7.5 hypothetical protein compare
RR42_RS15020 -2.0 -8.9 (2Fe-2S)-binding protein compare
RR42_RS27065 -2.0 -1.9 hypothetical protein compare
RR42_RS06270 -2.0 -6.0 cupin compare
RR42_RS14080 -2.0 -10.2 RNA polymerase sigma factor RpoE compare
RR42_RS12015 -1.9 -1.5 dihydrolipoamide acyltransferase compare
RR42_RS15795 -1.9 -4.5 spore coat protein compare
RR42_RS23305 -1.9 -1.5 hypothetical protein compare
RR42_RS01830 -1.9 -6.0 sulfurtransferase compare
RR42_RS18385 -1.8 -3.1 hypothetical protein compare
RR42_RS12590 -1.8 -1.0 50S ribosomal protein L9 compare
RR42_RS23110 -1.8 -1.7 isochorismatase compare
RR42_RS23205 -1.8 -1.2 hypothetical protein compare
RR42_RS15450 -1.8 -3.3 Tol system periplasmic component YbgF compare
RR42_RS32245 -1.8 -7.0 RND transporter compare
RR42_RS07565 -1.8 -5.4 transcription accessory protein compare
RR42_RS15785 -1.8 -8.0 glycosyl transferase family 28 compare
RR42_RS15060 -1.8 -2.9 membrane protein compare
RR42_RS15745 -1.7 -5.4 group1 glycosyl transferase compare
RR42_RS11180 -1.7 -2.5 peptidylprolyl isomerase compare
RR42_RS13360 -1.7 -5.7 esterase compare
RR42_RS13565 -1.7 -11.9 lytic transglycosylase compare
RR42_RS19680 -1.7 -2.7 hypothetical protein compare
RR42_RS22585 -1.7 -2.1 MarR family transcriptional regulator compare
RR42_RS15410 -1.7 -3.7 membrane protein compare
RR42_RS33195 -1.7 -8.0 UDP-sugar lipid carrier transferase compare
RR42_RS00295 -1.7 -5.1 DEAD/DEAH box helicase compare
RR42_RS16675 -1.7 -1.0 hypothetical protein compare
RR42_RS13190 -1.7 -4.0 outer membrane metallopeptidase lipoprotein nlpD compare
RR42_RS32250 -1.6 -10.7 ABC transporter compare
RR42_RS17685 -1.6 -6.8 alkyl hydroperoxide reductase compare
RR42_RS26590 -1.6 -1.5 hypothetical protein compare
RR42_RS17620 -1.6 -4.0 phosphatidylglycerophosphatase compare
RR42_RS27320 -1.6 -1.9 ferredoxin compare
RR42_RS14660 -1.6 -3.9 chromate transporter compare
RR42_RS03560 -1.6 -2.3 hypothetical protein compare
RR42_RS18670 -1.6 -4.9 metal-dependent hydrolase compare
RR42_RS26220 -1.5 -2.1 citrate lyase subunit beta compare
RR42_RS19745 -1.5 -3.3 RlpA-like protein compare
RR42_RS14790 -1.5 -7.5 cobalamin biosynthesis protein CobD compare
RR42_RS33215 -1.5 -7.9 transferase compare
RR42_RS18520 -1.5 -2.9 hypothetical protein compare
RR42_RS18970 -1.5 -8.8 toluene ABC transporter ATP-binding protein compare
RR42_RS01925 -1.5 -5.9 photosynthetic protein synthase I compare
RR42_RS07615 -1.5 -2.1 3-ketoacyl-ACP reductase compare
RR42_RS03530 -1.5 -1.3 hypothetical protein compare
RR42_RS18805 -1.5 -6.3 peptidase compare
RR42_RS01795 -1.5 -8.6 phosphoenolpyruvate-protein phosphotransferase compare
RR42_RS13515 -1.5 -3.9 membrane protein compare
RR42_RS19065 -1.4 -8.2 transcriptional regulator compare
RR42_RS14055 -1.4 -2.4 elongation factor 4 compare
RR42_RS28410 -1.4 -2.8 dimethylmenaquinone methyltransferase compare
RR42_RS12950 -1.4 -4.6 membrane protein compare
RR42_RS07570 -1.4 -4.0 hypothetical protein compare
RR42_RS36260 -1.4 -7.1 membrane protein compare
RR42_RS13195 -1.4 -6.4 protein-L-isoaspartate O-methyltransferase compare
RR42_RS17355 -1.4 -0.9 hypothetical protein compare
RR42_RS20775 -1.4 -0.9 hypothetical protein compare
RR42_RS15465 -1.4 -1.5 TonB-dependent receptor compare
RR42_RS27230 -1.4 -2.1 DNA-binding protein compare
RR42_RS07605 -1.4 -4.2 poly-beta-hydroxybutyrate polymerase compare
RR42_RS02810 -1.4 -1.9 acyl-phosphate glycerol 3-phosphate acyltransferase compare
RR42_RS26455 -1.4 -0.9 amino acid ABC transporter ATP-binding protein compare
RR42_RS34520 -1.4 -0.9 transposase compare
RR42_RS15090 -1.4 -2.5 DNA helicase compare
RR42_RS14045 -1.3 -2.3 membrane protein compare
RR42_RS15730 -1.3 -6.2 sugar transferase compare
RR42_RS08465 -1.3 -2.4 hypothetical protein compare
RR42_RS03145 -1.3 -6.0 peptidase M48 compare
RR42_RS00460 -1.3 -6.3 septum formation inhibitor compare
RR42_RS05500 -1.3 -1.1 preprotein translocase subunit SecG compare
RR42_RS15875 -1.3 -2.9 hypothetical protein compare
RR42_RS03095 -1.3 -1.4 succinyl-CoA synthetase subunit beta compare
RR42_RS01290 -1.3 -4.6 thiamine biosynthesis protein ThiC compare
RR42_RS03170 -1.3 -3.5 hypothetical protein compare
RR42_RS27080 -1.3 -1.6 hypothetical protein compare
RR42_RS11785 -1.3 -1.1 NfeD-like family protein 1 compare
RR42_RS18925 -1.3 -5.3 UDP-N-acetylglucosamine 1-carboxyvinyltransferase compare
RR42_RS00360 -1.3 -1.9 Asp/Glu/hydantoin racemase compare
RR42_RS21685 -1.3 -3.2 hypothetical protein compare
RR42_RS17555 -1.3 -1.1 hypothetical protein compare
RR42_RS05425 -1.2 -4.2 membrane protein compare
RR42_RS15420 -1.2 -3.1 hypothetical protein compare
RR42_RS13685 -1.2 -1.4 cupin compare
RR42_RS06260 -1.2 -6.8 MBL fold metallo-hydrolase compare
RR42_RS32235 -1.2 -4.1 hopanoid biosynthesis associated radical SAM protein HpnH compare
RR42_RS25015 -1.2 -1.9 gluconolactonase compare
RR42_RS09015 -1.2 -2.1 trigger factor compare
RR42_RS01845 -1.2 -1.7 glycerol-3-phosphate dehydrogenase compare
RR42_RS02380 -1.2 -3.8 FAD-linked oxidase compare
RR42_RS33205 -1.2 -6.6 UDP-glucose 6-dehydrogenase compare
RR42_RS08590 -1.2 -0.9 baseplate assembly protein compare
RR42_RS15490 -1.2 -3.9 NrdR family transcriptional regulator compare
RR42_RS18965 -1.2 -7.6 ABC transporter permease compare
RR42_RS06785 -1.2 -2.5 hypothetical protein compare
RR42_RS28315 -1.2 -3.0 GntR family transcriptional regulator compare
RR42_RS07590 -1.2 -4.0 pseudouridine synthase compare
RR42_RS18960 -1.2 -8.2 ABC transporter substrate-binding protein compare
RR42_RS07410 -1.2 -5.7 peptidase S11 compare
RR42_RS36265 -1.2 -2.7 esterase compare
RR42_RS01405 -1.2 -8.5 lytic transglycosylase compare
RR42_RS15825 -1.2 -6.5 capsular biosynthesis protein compare
RR42_RS09470 -1.1 -2.0 2-dehydro-3-deoxygluconokinase compare
RR42_RS15735 -1.1 -7.5 pyridoxal phosphate-dependent aminotransferase compare
RR42_RS35900 -1.1 -6.1 hypothetical protein compare
RR42_RS26925 -1.1 -1.4 membrane protein compare
RR42_RS36120 -1.1 -4.1 LysR family transcriptional regulator compare
RR42_RS02870 -1.1 -3.0 RNA helicase compare
RR42_RS11370 -1.1 -5.5 ABC transporter ATP-binding protein compare
RR42_RS28920 -1.1 -1.5 hypothetical protein compare
RR42_RS16765 -1.1 -2.0 glycerol kinase compare
RR42_RS34215 -1.1 -1.0 ferredoxin compare
RR42_RS17045 -1.1 -5.4 SAM-dependent methyltransferase compare
RR42_RS02840 -1.1 -4.4 cation transporter compare
RR42_RS15770 -1.1 -3.6 hypothetical protein compare
RR42_RS20535 -1.1 -5.3 3-phosphoglycerate dehydrogenase compare
RR42_RS27120 -1.1 -1.1 amino acid ABC transporter permease compare
RR42_RS06475 -1.1 -5.8 glycerol acyltransferase compare
RR42_RS12305 -1.1 -0.8 hypothetical protein compare
RR42_RS23040 -1.1 -1.6 hypothetical protein compare
RR42_RS26535 -1.1 -2.0 diguanylate cyclase compare
RR42_RS28455 -1.1 -2.5 LysR family transcriptional regulator compare
RR42_RS15775 -1.1 -3.5 N-acetylneuraminate synthase compare
RR42_RS27215 -1.1 -1.8 LysR family transcriptional regulator compare
RR42_RS19005 -1.1 -3.7 3-dehydroquinate synthase compare
RR42_RS12130 -1.1 -1.4 hypothetical protein compare
RR42_RS31850 -1.1 -1.5 2-keto-4-pentenoate hydratase compare
RR42_RS00455 -1.1 -4.9 cell division inhibitor MinD compare
RR42_RS15890 -1.1 -3.9 heme biosynthesis protein HemY compare
RR42_RS29365 -1.1 -2.0 ArsR family transcriptional regulator compare
RR42_RS18300 -1.0 -3.1 anthranilate synthase subunit II compare
RR42_RS35875 -1.0 -5.0 UDP-galactose-4-epimerase compare
RR42_RS04255 -1.0 -1.1 chemotaxis protein CheW compare
RR42_RS01025 -1.0 -3.4 GTPase compare
RR42_RS19750 -1.0 -1.0 MBL fold metallo-hydrolase compare
RR42_RS01270 -1.0 -7.0 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase compare
RR42_RS03555 -1.0 -2.2 hypothetical protein compare
RR42_RS01785 -1.0 -3.0 PTS fructose transporter subunit IIA compare
RR42_RS27210 -1.0 -2.2 hypothetical protein compare


Specific Phenotypes

For 26 genes in this experiment

For stress Vancomycin Hydrochloride Hydrate in Cupriavidus basilensis FW507-4G11

For stress Vancomycin Hydrochloride Hydrate across organisms