Experiment set1IT021 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Erythromycin 25 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_0259 -3.5 -4.1 Osmolarity sensor protein envZ compare
Psyr_4009 -3.4 -9.3 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2282 -3.4 -12.6 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_4740 -3.3 -6.8 thiazole-phosphate synthase compare
Psyr_2283 -3.2 -5.7 Secretion protein HlyD compare
Psyr_4340 -3.0 -7.7 phosphomethylpyrimidine kinase, putative compare
Psyr_0951 -2.9 -3.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4341 -2.6 -7.6 thiamine-phosphate diphosphorylase compare
Psyr_3886 -2.6 -2.4 methionyl-tRNA synthetase compare
Psyr_1613 -2.5 -4.1 septum site-determining protein MinC compare
Psyr_1614 -2.5 -3.7 lipid A biosynthesis acyltransferase compare
Psyr_1268 -2.4 -7.3 extracellular solute-binding protein, family 3:SLT compare
Psyr_0487 -2.4 -3.2 glutathione synthase compare
Psyr_0014 -2.4 -4.1 lipid A biosynthesis acyltransferase compare
Psyr_4362 -2.3 -3.0 Rare lipoprotein A compare
Psyr_4822 -2.0 -3.4 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1111 -2.0 -2.3 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0579 -2.0 -10.4 RNAse R compare
Psyr_0215 -1.9 -10.3 Exodeoxyribonuclease III xth compare
Psyr_3831 -1.9 -10.6 ATP-dependent helicase HrpA conserved
Psyr_1544 -1.8 -4.4 SirA-like protein compare
Psyr_0550 -1.8 -3.5 Protein of unknown function UPF0227 compare
Psyr_1373 -1.7 -2.5 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0849 -1.7 -9.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3005 -1.7 -2.4 3-oxoadipate enol-lactonase compare
Psyr_4203 -1.6 -2.1 SsrA-binding protein compare
Psyr_1543 -1.6 -7.3 Peptidase M48, Ste24p compare
Psyr_1556 -1.6 -2.3 hypothetical protein compare
Psyr_1251 -1.6 -3.2 quinoprotein compare
Psyr_1227 -1.6 -2.8 Queuosine biosynthesis protein compare
Psyr_4683 -1.5 -3.5 dethiobiotin synthase compare
Psyr_2617 -1.5 -1.7 Secretion protein HlyD compare
Psyr_4144 -1.5 -1.6 Protein of unknown function DUF1239 compare
Psyr_3121 -1.5 -2.7 Protein of unknown function DUF1345 compare
Psyr_0255 -1.4 -2.1 glutamate-cysteine ligase compare
Psyr_2487 -1.4 -3.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_0435 -1.4 -1.8 membrane protein, putative compare
Psyr_1410 -1.4 -3.3 Holliday junction DNA helicase RuvB compare
Psyr_4819 -1.4 -7.4 conserved hypothetical protein compare
Psyr_4112 -1.4 -8.1 Protein of unknown function UPF0011 compare
Psyr_4687 -1.4 -5.0 biotin synthase compare
Psyr_4091 -1.3 -3.7 8-oxo-dGTPase compare
Psyr_1304 -1.3 -2.2 CheW-like protein compare
Psyr_4887 -1.3 -7.9 Peptidase S41A, C-terminal protease compare
Psyr_3954 -1.3 -4.0 GTP-binding protein LepA compare
Psyr_5132 -1.3 -2.6 Glucose-inhibited division protein A subfamily compare
Psyr_4684 -1.3 -1.9 biotin synthesis protein BioC compare
Psyr_1667 -1.3 -4.4 Colicin V production protein compare
Psyr_4634 -1.3 -1.7 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_1418 -1.3 -3.0 Radical SAM compare
Psyr_2980 -1.3 -2.8 UDP-glucose pyrophosphorylase compare
Psyr_1751 -1.3 -3.9 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0571 -1.3 -2.8 tRNA isopentenyltransferase compare
Psyr_0454 -1.2 -3.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0202 -1.2 -6.4 transcriptional regulator, LysR family compare
Psyr_2327 -1.2 -2.8 GTP cyclohydrolase subunit MoaA compare
Psyr_0081 -1.2 -1.9 ABC transporter compare
Psyr_4686 -1.2 -3.9 8-amino-7-oxononanoate synthase compare
Psyr_0574 -1.2 -3.5 protease FtsH subunit HflK compare
Psyr_4116 -1.2 -2.3 Transport-associated protein compare
Psyr_4627 -1.2 -1.9 dimethyladenosine transferase compare
Psyr_2973 -1.2 -2.1 Glyoxalase I compare
Psyr_4015 -1.1 -1.6 conserved domain protein compare
Psyr_2347 -1.1 -2.7 hypothetical protein compare
Psyr_3889 -1.1 -2.3 conserved hypothetical protein compare
Psyr_4566 -1.1 -5.9 Peptidase M23B compare
Psyr_4464 -1.1 -1.4 lipoprotein, putative compare
Psyr_0179 -1.1 -2.0 Protein of unknown function DUF1289 compare
Psyr_2112 -1.1 -2.0 Protein with unknown function DUF469 compare
Psyr_2196 -1.1 -1.7 Urease accessory protein UreG compare
Psyr_0565 -1.0 -3.6 Protein of unknown function UPF0126 compare
Psyr_0575 -1.0 -2.7 protease FtsH subunit HflC compare
Psyr_1975 -1.0 -2.1 Integrase, catalytic region compare
Psyr_2520 -1.0 -1.8 SOS-response transcriptional repressor, LexA compare
Psyr_0947 -1.0 -4.7 TPR repeat protein:TPR repeat protein compare
Psyr_4194 -1.0 -3.1 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0044 -1.0 -1.5 transferase hexapeptide repeat protein compare
Psyr_0827 -1.0 -3.2 pantothenate synthetase compare
Psyr_1801 -1.0 -2.8 1-aminocyclopropane-1-carboxylate deaminase compare
Psyr_3321 -1.0 -2.4 transcriptional regulator, LysR family compare
Psyr_4001 -1.0 -1.3 conserved domain protein compare
Psyr_0319 -1.0 -3.8 conserved hypothetical protein compare
Psyr_1530 -1.0 -2.1 hypothetical protein compare
Psyr_4114 -1.0 -4.5 Protein of unknown function UPF0102 compare
Psyr_3130 -1.0 -3.0 Secretion protein HlyD compare
Psyr_4087 -1.0 -1.6 Protein of unknown function DUF520 compare
Psyr_2823 -0.9 -1.6 hypothetical protein compare
Psyr_3146 -0.9 -1.4 general secretion pathway protein J, putative compare
Psyr_3039 -0.9 -2.5 protein of unknown function DUF883 compare
Psyr_2346 -0.9 -2.9 conserved hypothetical protein compare
Psyr_4808 -0.9 -1.5 conserved hypothetical protein compare
Psyr_0304 -0.9 -3.0 ChaC-like protein compare
Psyr_3727 -0.9 -3.1 conserved hypothetical protein compare
Psyr_1022 -0.9 -1.0 conserved hypothetical protein compare
Psyr_3581 -0.9 -3.4 ribosomal large subunit pseudouridine synthase B compare
Psyr_4118 -0.9 -4.3 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_1404 -0.9 -5.4 Ferritin and Dps compare
Psyr_4407 -0.9 -2.0 phosphoribosylamine--glycine ligase compare
Psyr_0510 -0.9 -2.2 conserved hypothetical protein compare
Psyr_1555 -0.9 -2.9 Cobyrinic acid a,c-diamide synthase compare
Psyr_1907 -0.9 -2.2 GTP cyclohydrolase I compare
Psyr_2169 -0.9 -3.3 transcriptional regulator, MerR family compare
Psyr_4991 -0.9 -1.5 hypothetical protein compare
Psyr_4158 -0.9 -4.7 conserved hypothetical protein compare
Psyr_5051 -0.9 -3.5 Aspartate ammonia-lyase compare
Psyr_2200 -0.9 -1.5 UreE urease accessory, N-terminal compare
Psyr_2095 -0.9 -2.9 Conserved TM helix compare
Psyr_3681 -0.9 -1.4 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_2894 -0.9 -1.6 conserved hypothetical protein compare
Psyr_3701 -0.9 -1.5 thioredoxin, putative compare
Psyr_4346 -0.9 -3.1 PhoH-like protein compare
Psyr_0318 -0.9 -3.2 cell division protein ZapA compare
Psyr_4089 -0.9 -3.3 PAS compare
Psyr_RNA61 -0.8 -2.4 tRNA-Gly compare
Psyr_2226 -0.8 -2.1 formyltetrahydrofolate deformylase compare
Psyr_4821 -0.8 -3.8 PAS/PAC sensor signal transduction histidine kinase compare
Psyr_1747 -0.8 -2.4 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3116 -0.8 -2.4 transcriptional regulator, CdaR family compare
Psyr_1930 -0.8 -2.0 hypothetical protein compare
Psyr_4417 -0.8 -1.2 Ferredoxin--nitrite reductase compare
Psyr_1668 -0.8 -3.5 amidophosphoribosyltransferase compare
Psyr_3776 -0.8 -2.6 Cytosine deaminase compare
Psyr_0630 -0.8 -3.4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
Psyr_3723 -0.8 -2.0 CDS compare
Psyr_3952 -0.8 -2.1 conserved hypothetical protein compare
Psyr_0498 -0.8 -2.4 Protein of unknown function DUF1445 compare
Psyr_1748 -0.8 -2.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_1953 -0.8 -1.2 conserved hypothetical protein compare
Psyr_4057 -0.8 -2.1 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_3597 -0.8 -1.0 ABC transporter compare
Psyr_5129 -0.8 -2.4 chromosome segregation DNA-binding protein compare
Psyr_3854 -0.7 -0.9 OmpA/MotB compare
Psyr_0432 -0.7 -2.1 conserved hypothetical protein compare
Psyr_2833 -0.7 -1.3 CDS compare
Psyr_1678 -0.7 -0.9 Hypothetical protein compare
Psyr_1050 -0.7 -1.6 conserved hypothetical protein compare
Psyr_0137 -0.7 -1.1 outer membrane transport energization protein ExbD compare
Psyr_2826 -0.7 -2.5 hypothetical protein compare
Psyr_2107 -0.7 -2.2 Ribosome modulation factor compare
Psyr_1287 -0.7 -2.9 hypothetical protein compare
Psyr_4055 -0.7 -2.2 conserved domain protein compare
Psyr_4381 -0.7 -5.6 arginine decarboxylase compare
Psyr_2620 -0.7 -1.4 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3055 -0.7 -1.5 Aminoglycoside phosphotransferase compare
Psyr_5135 -0.7 -1.3 Protein of unknown function DUF37 compare
Psyr_3583 -0.7 -1.7 condensin subunit ScpB compare
Psyr_2642 -0.7 -2.1 hypothetical protein compare
Psyr_2688 -0.7 -2.6 conserved hypothetical protein compare
Psyr_0735 -0.7 -1.4 Peptidase S24, S26A and S26B compare
Psyr_3164 -0.7 -3.7 Protein of unknown function UPF0005 compare
Psyr_5065 -0.7 -3.8 ATP-dependent DNA helicase UvrD compare
Psyr_2227 -0.7 -1.3 conserved hypothetical protein compare
Psyr_4121 -0.7 -3.7 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_2991 -0.7 -2.9 GCN5-related N-acetyltransferase compare
Psyr_4019 -0.7 -2.1 H-NS family protein MvaT compare
Psyr_2461 -0.7 -2.1 Uncharacterized conserved protein UCP030820 compare
Psyr_2118 -0.7 -2.0 protein of unknown function DUF883 compare
Psyr_0383 -0.7 -1.1 Twin-arginine translocation protein TatB compare
Psyr_3955 -0.7 -2.9 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_0033 -0.7 -1.8 tryptophan synthase, alpha chain compare
Psyr_3014 -0.7 -1.8 protoporphyrin IX magnesium-chelatase compare
Psyr_3127 -0.7 -2.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1910 -0.7 -2.4 VacJ-like lipoprotein compare
Psyr_1721 -0.7 -2.5 moxR protein, putative compare
Psyr_4361 -0.7 -1.6 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_1588 -0.7 -1.8 Putative exonuclease, RdgC compare
Psyr_3459 -0.7 -1.4 Helix-turn-helix, Fis-type compare
Psyr_0099 -0.7 -1.8 Conserved hypothetical protein compare
Psyr_2767 -0.7 -1.4 Glycoside hydrolase, family 19 compare
Psyr_3427 -0.7 -1.0 conserved hypothetical protein compare
Psyr_3284 -0.7 -1.6 SOS cell division inhibitor SulA compare
Psyr_2977 -0.7 -2.4 cointegrate resolution protein T compare
Psyr_3640 -0.7 -1.5 conserved hypothetical protein compare
Psyr_2594 -0.7 -1.0 unknown conserved protein in bacilli compare
Psyr_1942 -0.7 -1.9 conserved hypothetical protein compare
Psyr_0184 -0.7 -1.7 Protein of unknown function DUF484 compare
Psyr_0201 -0.7 -3.4 ATP-dependent DNA helicase RecG compare
Psyr_1935 -0.6 -2.8 Protein of unknown function DUF796 compare
Psyr_2921 -0.6 -1.0 ADP-ribosylglycohydrolase compare
Psyr_1716 -0.6 -2.5 conserved hypothetical protein compare
Psyr_5071 -0.6 -2.3 conserved hypothetical protein compare
Psyr_0473 -0.6 -2.1 Methionine biosynthesis MetW compare
Psyr_2915 -0.6 -2.1 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_3282 -0.6 -2.4 transcriptional regulator, TetR family compare
Psyr_0972 -0.6 -2.8 conserved hypothetical protein compare
Psyr_4932 -0.6 -3.9 agmatine deiminase compare
Psyr_3094 -0.6 -2.8 Periplasmic binding protein compare
Psyr_0833 -0.6 -1.6 conserved hypothetical protein compare
Psyr_4673 -0.6 -1.3 Coenzyme PQQ synthesis D compare
Psyr_1639 -0.6 -3.5 ribosomal large subunit pseudouridine synthase C compare
Psyr_4933 -0.6 -2.8 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_1222 -0.6 -1.3 CDS compare
Psyr_3900 -0.6 -1.3 conserved hypothetical protein compare
Psyr_0373 -0.6 -1.5 CDS compare
Psyr_1417 -0.6 -2.4 TPR repeat protein compare
Psyr_4100 -0.6 -2.2 D-alanine--D-alanine ligase compare
Psyr_4512 -0.6 -2.1 putative phage-related protein compare
Psyr_1746 -0.6 -1.9 Trigger factor compare
Psyr_1599 -0.6 -4.1 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A compare
Psyr_2472 -0.6 -2.8 transcriptional regulator, MerR family compare


Specific Phenotypes

For 5 genes in this experiment

For stress Erythromycin in Pseudomonas syringae pv. syringae B728a

For stress Erythromycin across organisms