Experiment set1IT021 for Burkholderia phytofirmans PsJN

Compare to:

L-Glutamine carbon source

200 most important genes:

  gene name fitness t score description  
BPHYT_RS02610 -8.2 -5.6 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS17680 -8.0 -5.0 imidazole glycerol phosphate synthase subunit HisF compare
BPHYT_RS16835 -7.8 -5.4 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS17670 -7.5 -5.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
BPHYT_RS17675 -7.3 -2.3 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS33835 -7.3 -8.7 O-succinylhomoserine sulfhydrylase compare
BPHYT_RS03150 -7.3 -14.0 Phosphoglycerate dehydrogenase (EC:1.1.1.95) (from data) compare
BPHYT_RS09500 -7.3 -5.0 glucose-6-phosphate isomerase compare
BPHYT_RS17395 -7.2 -2.3 anthranilate synthase subunit II compare
BPHYT_RS33915 -7.2 -8.5 isopropylmalate isomerase compare
BPHYT_RS33875 -7.0 -10.1 tryptophan synthase subunit alpha compare
BPHYT_RS10100 -6.9 -4.7 dihydroxy-acid dehydratase compare
BPHYT_RS15915 -6.7 -6.6 ornithine carbamoyltransferase compare
BPHYT_RS15920 -6.7 -9.1 argininosuccinate synthase compare
BPHYT_RS33900 -6.6 -14.1 3-isopropylmalate dehydrogenase compare
BPHYT_RS33880 -6.6 -10.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS06405 -6.4 -9.6 phosphoribosylamine--glycine ligase compare
BPHYT_RS14910 -6.4 -11.3 chorismate mutase compare
BPHYT_RS14895 -6.4 -4.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS12055 -6.3 -15.2 phosphoenolpyruvate synthase compare
BPHYT_RS16270 -6.3 -5.0 phosphoglycerate kinase compare
BPHYT_RS02590 -6.2 -9.5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS17685 -6.2 -8.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BPHYT_RS17890 -6.2 -3.3 shikimate kinase compare
BPHYT_RS04740 -6.2 -7.9 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS18320 -6.1 -11.2 orotate phosphoribosyltransferase compare
BPHYT_RS08955 -6.1 -4.2 homoserine dehydrogenase compare
BPHYT_RS13705 -6.0 -3.9 chorismate synthase compare
BPHYT_RS09515 -6.0 -4.1 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS14845 -5.9 -4.1 cysteine synthase compare
BPHYT_RS14855 -5.8 -3.0 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS16710 -5.7 -1.8 LysR family transcriptional regulator compare
BPHYT_RS06555 -5.7 -6.2 ketol-acid reductoisomerase compare
BPHYT_RS33645 -5.6 -6.7 homoserine kinase compare
BPHYT_RS06545 -5.6 -11.1 acetolactate synthase compare
BPHYT_RS17690 -5.6 -13.7 imidazole glycerol phosphate synthase compare
BPHYT_RS17390 -5.5 -12.8 anthranilate synthase subunit I compare
BPHYT_RS04370 -5.3 -2.4 glycosyl transferase compare
BPHYT_RS06900 -5.2 -7.1 aspartate aminotransferase compare
BPHYT_RS17400 -5.2 -6.3 anthranilate phosphoribosyltransferase compare
BPHYT_RS14915 -5.2 -5.7 phosphoserine aminotransferase compare
BPHYT_RS16245 -5.2 -8.1 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS17885 -5.2 -8.6 3-dehydroquinate synthase compare
BPHYT_RS04725 -5.1 -8.2 sulfite reductase compare
BPHYT_RS08850 -5.1 -3.2 transcriptional regulator compare
BPHYT_RS14190 -5.0 -9.6 carbamoyl phosphate synthase large subunit compare
BPHYT_RS06610 -5.0 -2.2 triosephosphate isomerase compare
BPHYT_RS33865 -4.9 -8.9 tryptophan synthase alpha chain compare
BPHYT_RS01595 -4.9 -8.5 homoserine O-acetyltransferase compare
BPHYT_RS12985 -4.8 -3.2 amino acid acetyltransferase compare
BPHYT_RS03640 -4.8 -4.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS08960 -4.6 -2.5 threonine synthase compare
BPHYT_RS12845 -4.6 -16.5 ATPase compare
BPHYT_RS15620 -4.6 -6.2 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS35885 -4.5 -6.1 hypothetical protein compare
BPHYT_RS16675 -4.5 -3.1 dihydroorotase compare
BPHYT_RS16840 -4.5 -3.1 transketolase compare
BPHYT_RS17715 -4.4 -7.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS12530 -4.2 -4.3 ATP phosphoribosyltransferase regulatory subunit compare
BPHYT_RS03535 -4.1 -7.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BPHYT_RS16255 -4.0 -6.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS06175 -3.9 -5.2 LPS biosynthesis compare
BPHYT_RS17700 -3.8 -5.3 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS16905 -3.8 -4.7 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS13220 -3.8 -10.4 phosphomethylpyrimidine synthase compare
BPHYT_RS04965 -3.7 -9.9 ATP-binding protein compare
BPHYT_RS04385 -3.7 -5.3 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS14195 -3.6 -3.9 carbamoyl phosphate synthase small subunit compare
BPHYT_RS08565 -3.5 -1.5 dihydroorotate dehydrogenase compare
BPHYT_RS05960 -3.4 -7.6 endoribonuclease L-PSP compare
BPHYT_RS03725 -3.3 -2.5 serine hydroxymethyltransferase compare
BPHYT_RS17380 -3.3 -8.2 ribulose-phosphate 3-epimerase compare
BPHYT_RS04720 -3.3 -3.9 transcriptional regulator compare
BPHYT_RS17405 -3.2 -1.7 indole-3-glycerol phosphate synthase compare
BPHYT_RS04955 -3.1 -3.1 methionyl-tRNA synthetase compare
BPHYT_RS33840 -3.1 -6.1 amidophosphoribosyltransferase compare
BPHYT_RS12990 -3.0 -3.6 iron transporter compare
BPHYT_RS26685 -3.0 -1.9 precorrin-8X methylmutase compare
BPHYT_RS15590 -2.9 -8.1 amino acid ABC transporter ATPase compare
BPHYT_RS04730 -2.9 -2.1 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS04745 -2.9 -3.9 sulfate adenylyltransferase compare
BPHYT_RS18705 -2.8 -2.5 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS15595 -2.8 -13.5 ABC transporter conserved
BPHYT_RS08245 -2.7 -10.7 anti-sigma factor compare
BPHYT_RS06190 -2.7 -3.6 heptosyltransferase compare
BPHYT_RS17520 -2.7 -7.6 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS14865 -2.7 -4.4 UDP-glucose 6-dehydrogenase compare
BPHYT_RS01885 -2.6 -10.1 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS01590 -2.6 -8.0 methionine biosynthesis protein MetW compare
BPHYT_RS06685 -2.5 -3.1 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS02690 -2.5 -11.1 protoheme IX farnesyltransferase compare
BPHYT_RS31815 -2.5 -3.6 hypothetical protein compare
BPHYT_RS03625 -2.4 -10.2 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS15600 -2.4 -10.6 ABC transporter ATP-binding protein compare
BPHYT_RS03570 -2.4 -9.0 heat-inducible transcription repressor HrcA compare
BPHYT_RS28705 -2.4 -1.8 IclR family transcriptional regulator compare
BPHYT_RS02865 -2.3 -4.1 hypothetical protein compare
BPHYT_RS02650 -2.3 -1.8 membrane protein compare
BPHYT_RS27175 -2.3 -1.2 DNA-binding protein compare
BPHYT_RS12840 -2.2 -4.1 pyruvate dehydrogenase compare
BPHYT_RS03645 -2.2 -2.1 tRNA dimethylallyltransferase compare
BPHYT_RS34295 -2.2 -1.3 fimbrial protein compare
BPHYT_RS04285 -2.2 -3.1 rhamnosyltransferase compare
BPHYT_RS16470 -2.2 -6.7 DeoR faimly transcriptional regulator compare
BPHYT_RS15605 -2.2 -10.1 ABC transporter permease compare
BPHYT_RS14900 -2.1 -2.9 prephenate dehydrogenase compare
BPHYT_RS04820 -2.0 -7.2 LysR family transcriptional regulator compare
BPHYT_RS31910 -1.9 -2.6 hypothetical protein compare
BPHYT_RS16340 -1.9 -6.5 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS15670 -1.9 -8.3 phosphoribosylglycinamide formyltransferase compare
BPHYT_RS01485 -1.9 -1.4 histidine kinase compare
BPHYT_RS17540 -1.9 -13.7 L-aspartate/L-glutamate/L-glutamine:H+ symporter (from data) compare
BPHYT_RS02310 -1.9 -12.1 5-methyltetrahydrofolate--homocysteine methyltransferase compare
BPHYT_RS02640 -1.9 -10.6 cytochrome C oxidase compare
BPHYT_RS16880 -1.9 -1.6 malic enzyme compare
BPHYT_RS02305 -1.9 -9.7 methionine synthase compare
BPHYT_RS07570 -1.9 -1.6 hypothetical protein compare
BPHYT_RS36385 -1.9 -1.5 TetR family transcriptional regulator compare
BPHYT_RS33920 -1.8 -7.5 type II citrate synthase compare
BPHYT_RS12925 -1.8 -1.2 exodeoxyribonuclease III compare
BPHYT_RS16085 -1.8 -5.1 DeoR faimly transcriptional regulator compare
BPHYT_RS02525 -1.8 -8.7 membrane protein compare
BPHYT_RS02595 -1.8 -1.6 sulfurtransferase compare
BPHYT_RS23840 -1.7 -3.5 methyltransferase compare
BPHYT_RS18760 -1.7 -2.0 flagellar biosynthesis protein FliT compare
BPHYT_RS03215 -1.7 -2.5 TetR family transcriptional regulator compare
BPHYT_RS16975 -1.7 -4.8 shikimate 5-dehydrogenase compare
BPHYT_RS08950 -1.7 -4.3 aminotransferase compare
BPHYT_RS22145 -1.7 -1.6 phosphoesterase compare
BPHYT_RS18620 -1.7 -5.6 transcriptional regulator compare
BPHYT_RS17240 -1.7 -1.4 cell division protein FtsW compare
BPHYT_RS08125 -1.6 -7.7 ATPase compare
BPHYT_RS15610 -1.6 -8.4 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS12465 -1.6 -3.0 inositol monophosphatase compare
BPHYT_RS27295 -1.6 -1.5 hypothetical protein compare
BPHYT_RS02860 -1.6 -1.3 membrane protein compare
BPHYT_RS15615 -1.6 -3.5 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
BPHYT_RS02685 -1.6 -6.1 cytochrome C oxidase subunit I compare
BPHYT_RS18635 -1.6 -1.3 LamB/YcsF family protein compare
BPHYT_RS18310 -1.5 -7.5 malic enzyme conserved
BPHYT_RS02665 -1.5 -8.9 MFS transporter compare
BPHYT_RS31050 -1.5 -1.4 epimerase compare
BPHYT_RS06530 -1.5 -1.6 membrane protein compare
BPHYT_RS16345 -1.5 -3.6 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS22910 -1.5 -1.4 hypothetical protein compare
BPHYT_RS06600 -1.5 -1.7 polynucleotide phosphorylase/polyadenylase compare
BPHYT_RS19680 -1.5 -10.2 glutamate--cysteine ligase compare
BPHYT_RS22695 -1.4 -7.6 TetR family transcriptional regulator compare
BPHYT_RS00915 -1.4 -7.2 IclR family transcriptional regulator compare
BPHYT_RS20440 -1.4 -1.5 IclR family transcriptional regulator compare
BPHYT_RS06070 -1.4 -5.0 cytochrome C compare
BPHYT_RS20790 -1.4 -1.7 TetR family transcriptional regulator compare
BPHYT_RS03495 -1.4 -4.2 hypothetical protein compare
BPHYT_RS35735 -1.4 -1.7 nitroreductase compare
BPHYT_RS24315 -1.4 -1.5 phosphoribosyltransferase compare
BPHYT_RS34445 -1.4 -3.2 GntR family transcriptional regulator compare
BPHYT_RS33905 -1.4 -0.7 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS30510 -1.4 -2.5 aldehyde dehydrogenase compare
BPHYT_RS02680 -1.4 -6.3 cytochrome C oxidase subunit I compare
BPHYT_RS14920 -1.3 -1.7 hypothetical protein compare
BPHYT_RS08150 -1.3 -0.9 membrane protein compare
BPHYT_RS06065 -1.3 -7.4 cytochrome C compare
BPHYT_RS22455 -1.3 -1.2 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS04290 -1.3 -1.8 glycosyl transferase family 2 compare
BPHYT_RS26570 -1.3 -1.0 5'-nucleotidase compare
BPHYT_RS12815 -1.3 -5.6 IclR family transcriptional regulator compare
BPHYT_RS16740 -1.3 -5.9 transcriptional regulator compare
BPHYT_RS18630 -1.3 -3.3 allophanate hydrolase compare
BPHYT_RS13610 -1.3 -3.3 MerR family transcriptional regulator compare
BPHYT_RS05675 -1.3 -6.9 hypothetical protein compare
BPHYT_RS20840 -1.3 -2.2 beta-lactamase compare
BPHYT_RS17945 -1.3 -1.8 cytochrome C biogenesis protein compare
BPHYT_RS10285 -1.3 -2.2 hypothetical protein compare
BPHYT_RS33655 -1.3 -4.8 MarR family transcriptional regulator compare
BPHYT_RS21335 -1.2 -1.9 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS15450 -1.2 -7.1 chromosome partitioning protein compare
BPHYT_RS18625 -1.2 -6.4 allophanate hydrolase conserved
BPHYT_RS16250 -1.2 -1.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS06400 -1.2 -3.7 oxygen-dependent coproporphyrinogen-III oxidase compare
BPHYT_RS02560 -1.2 -6.1 glutathione synthetase compare
BPHYT_RS17095 -1.2 -2.6 proline--tRNA ligase compare
BPHYT_RS35245 -1.1 -1.7 hypothetical protein compare
BPHYT_RS19975 -1.1 -7.5 IclR family transcriptional regulator compare
BPHYT_RS15455 -1.1 -2.3 hypothetical protein compare
BPHYT_RS19570 -1.1 -8.1 sodium/hydrogen exchanger compare
BPHYT_RS26025 -1.1 -0.9 hypothetical protein compare
BPHYT_RS13350 -1.1 -5.0 shikimate kinase compare
BPHYT_RS14105 -1.1 -9.2 exopolyphosphatase compare
BPHYT_RS09825 -1.1 -1.5 Fe-S protein compare
BPHYT_RS05225 -1.1 -6.6 phosphoenolpyruvate carboxylase compare
BPHYT_RS09480 -1.1 -0.9 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS24580 -1.1 -1.2 hypothetical protein compare
BPHYT_RS02285 -1.1 -3.6 cell division protein compare
BPHYT_RS32360 -1.1 -1.4 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS02635 -1.1 -6.2 membrane protein compare
BPHYT_RS30200 -1.1 -2.5 FAD-dependent oxidoreductase compare
BPHYT_RS32200 -1.1 -1.1 lytic transglycosylase compare
BPHYT_RS11125 -1.0 -1.2 alkylhydroperoxidase compare
BPHYT_RS02600 -1.0 -2.0 glutaredoxin compare
BPHYT_RS02675 -1.0 -4.6 hypothetical protein compare


Specific Phenotypes

For 16 genes in this experiment

For carbon source L-Glutamine in Burkholderia phytofirmans PsJN

For carbon source L-Glutamine across organisms