Experiment set1IT020 for Caulobacter crescentus NA1000

Compare to:

D-Maltose monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_02646 +3.0 5.0 cell division protein MraZ compare
CCNA_01851 +2.5 18.5 quinol cytochrome oxidase polypeptide II compare
CCNA_01848 +2.5 13.0 quinol cytochrome oxidase polypeptide IV compare
CCNA_01850 +2.4 17.2 quinol cytochrome oxidase polypeptide I compare
CCNA_02644 +2.3 7.3 cell division protein FtsL compare
CCNA_01790 +2.3 6.0 protein translocase subunit secG compare
CCNA_01712 +2.3 17.6 CopY/TcrY family transcriptional repressor compare
CCNA_01849 +2.2 10.9 quinol cytochrome oxidase polypeptide III compare
CCNA_00505 +2.1 8.9 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_02103 +2.1 6.9 hypothetical protein compare
CCNA_01979 +2.1 9.0 LexA repressor compare
CCNA_01840 +2.1 14.1 MerR-family transcriptional regulator compare
CCNA_00699 +2.0 8.5 LSU ribosomal protein L28P compare
CCNA_00684 +2.0 7.9 anti-sigma factor, ChrR-family compare
CCNA_00769 +1.9 10.4 TetR family transcriptional regulator compare
CCNA_01684 +1.9 8.4 phenylalanine-4-hydroxylase compare
CCNA_02000 +1.9 2.6 SSU ribosomal protein S2P compare
CCNA_03064 +1.9 9.2 PadR-family transcriptional regulator compare
CCNA_00518 +1.9 13.7 LSU ribosomal protein L25P compare
CCNA_01059 +1.8 14.7 S-layer protein rsaA compare
CCNA_00506 +1.8 9.5 cytochrome b compare
CCNA_03287 +1.8 10.8 PadR-family transcriptional regulator compare
CCNA_03280 +1.8 15.1 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02957 +1.8 5.2 ArsR-family transcriptional regulator compare
CCNA_01801 +1.8 7.5 hypothetical protein compare
CCNA_01931 +1.8 8.6 TetR-family transcriptional regulator compare
CCNA_01804 +1.7 10.4 glutathione peroxidase compare
CCNA_01573 +1.7 8.5 ArsR-family transcriptional regulator compare
CCNA_00107 +1.7 4.9 Trm112p-like protein compare
CCNA_01681 +1.7 5.8 RimI-like acetyltransferase compare
CCNA_02416 +1.7 9.0 DNA-binding protein HU compare
CCNA_03893 +1.7 3.7 hypothetical protein compare
CCNA_01847 +1.7 10.8 cytochrome c oxidase assembly protein Surf1 compare
CCNA_R0037 +1.6 6.0 tRNA-Glu compare
CCNA_03951 +1.6 5.1 hypothetical protein compare
CCNA_02387 +1.6 12.5 glutathione reductase compare
CCNA_02025 +1.6 4.5 hypothetical protein compare
CCNA_00527 +1.6 8.0 hypothetical protein compare
CCNA_03012 +1.6 8.2 peroxiredoxin compare
CCNA_02021 +1.6 5.5 hypothetical protein compare
CCNA_03030 +1.6 9.3 cytochrome c2 compare
CCNA_01913 +1.6 9.1 MarR-family transcriptional regulator compare
CCNA_01526 +1.6 5.4 flagellar biosynthesis regulatory protein flaF compare
CCNA_03325 +1.6 5.0 hypothetical protein compare
CCNA_03271 +1.6 10.2 methionine gamma-lyase compare
CCNA_02617 +1.6 10.8 histidinol-phosphate aminotransferase compare
CCNA_02250 +1.6 3.5 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_01405 +1.6 4.9 GIY-YIG domain protein compare
CCNA_02567 +1.5 11.0 sensory transduction histidine kinase pleC compare
CCNA_02289 +1.5 8.5 MarR/EmrR family transcriptional regulator compare
CCNA_02760 +1.5 2.7 hypothetical protein compare
CCNA_00554 +1.5 7.7 methyltransferase compare
CCNA_01968 +1.5 5.4 pentapeptide repeats containing protein compare
CCNA_01094 +1.5 3.1 hypothetical protein compare
CCNA_02619 +1.5 12.0 stomatin/prohibitin-related protein compare
CCNA_00999 +1.5 5.9 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_02448 +1.5 10.5 hypothetical protein compare
CCNA_02379 +1.5 8.1 hypothetical protein compare
CCNA_00507 +1.5 7.5 cytochrome c1 compare
CCNA_00895 +1.5 8.2 hypothetical protein compare
CCNA_03519 +1.5 6.2 PadR-family transcriptional regulator compare
CCNA_02591 +1.5 4.2 glutaredoxin compare
CCNA_03936 +1.5 4.1 hypothetical protein compare
CCNA_02037 +1.5 7.3 ATP-dependent endopeptidase Lon compare
CCNA_00362 +1.5 3.4 zinc uptake regulation protein compare
CCNA_02287 +1.5 7.6 TetR-family transcriptional regulator compare
CCNA_01541 +1.5 9.6 LysR-family transcriptional regulator compare
CCNA_03252 +1.5 11.5 CopY/TcrY-family transcriptional regulator compare
CCNA_03989 +1.5 10.6 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_02980 +1.5 9.8 tryptophan 2,3-dioxygenase compare
CCNA_03479 +1.5 7.3 MarR-family transcriptional regulator compare
CCNA_00756 +1.5 3.9 hypothetical protein compare
CCNA_03289 +1.5 9.9 HicB-family RNA-binding protein compare
CCNA_01655 +1.5 7.3 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01619 +1.5 8.2 NYN domain protein compare
CCNA_03740 +1.5 7.0 cysteine synthase compare
CCNA_00939 +1.5 5.2 MarR-family transcriptional regulator compare
CCNA_01752 +1.5 7.7 YicC-family protein compare
CCNA_03123 +1.5 8.8 ArsR-family transcriptional regulator compare
CCNA_01690 +1.4 4.9 MAPEG family membrane protein compare
CCNA_03379 +1.4 3.1 Cro/CI family transcriptional regulator compare
CCNA_02616 +1.4 8.8 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01728 +1.4 6.9 short chain dehydrogenase compare
CCNA_00675 +1.4 4.6 VapC-like PIN domain ribonuclease compare
CCNA_01680 +1.4 7.5 succinylarginine dihydrolase compare
CCNA_01528 +1.4 7.7 flagellin fljK compare
CCNA_01742 +1.4 5.6 hypothetical protein compare
CCNA_01780 +1.4 10.0 exopolyphosphatase compare
CCNA_00919 +1.4 6.1 hypothetical protein compare
CCNA_03108 +1.4 9.7 TonB-dependent outer membrane receptor compare
CCNA_01593 +1.4 8.4 Xaa-pro aminopeptidase compare
CCNA_01679 +1.4 8.2 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01739 +1.4 6.9 LSU ribosomal protein L9P compare
CCNA_00028 +1.4 4.9 TonB-dependent receptor compare
CCNA_02534 +1.4 2.4 hypothetical protein compare
CCNA_00447 +1.4 5.9 chemotaxis protein cheD compare
CCNA_02063 +1.4 6.1 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_03964 +1.4 3.6 hypothetical protein compare
CCNA_02004 +1.3 2.5 SOS-induced inhibitor of cell division SidA compare
CCNA_02447 +1.3 10.0 PspA/IM30 family regulatory protein compare
CCNA_03961 +1.3 3.8 hypothetical protein compare
CCNA_01525 +1.3 6.2 flagellar biosynthesis repressor flbT compare
CCNA_01193 +1.3 9.7 amylosucrase compare
CCNA_01361 +1.3 2.4 PepSY superfamily protein compare
CCNA_00324 +1.3 2.4 ExbD-family protein compare
CCNA_00803 +1.3 4.6 chemotaxis protein cheW compare
CCNA_02728 +1.3 6.0 hypothetical protein compare
CCNA_02843 +1.3 3.0 toxin protein parE-3 compare
CCNA_02419 +1.3 4.2 TonB1 protein compare
CCNA_00846 +1.3 11.4 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00215 +1.3 7.5 SapC surface layer protein compare
CCNA_03805 +1.3 9.0 PadR-family transcriptional regulator compare
CCNA_03524 +1.3 7.8 di-/tripeptide transporter compare
CCNA_02273 +1.3 4.3 glutathione peroxidase compare
CCNA_02339 +1.3 8.0 methyltransferase compare
CCNA_00705 +1.3 3.7 hypothetical protein compare
CCNA_03612 +1.3 5.6 HTH XRE-family transcriptional regulator compare
CCNA_03944 +1.3 1.0 hypothetical protein compare
CCNA_02338 +1.3 6.6 hypothetical protein compare
CCNA_00147 +1.3 2.0 hypothetical protein compare
CCNA_00931 +1.3 8.2 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_01608 +1.3 5.4 TetR-family transcriptional regulator compare
CCNA_01420 +1.3 7.2 NrdR family transcriptional regulator compare
CCNA_00441 +1.3 5.6 chemotaxis receiver domain protein cheYI compare
CCNA_03129 +1.3 8.6 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_02475 +1.3 8.6 transcriptional regulator vanR compare
CCNA_01406 +1.3 5.6 metal-dependent hydrolase compare
CCNA_01393 +1.3 9.5 soluble lytic murein transglycosylase compare
CCNA_02367 +1.3 8.8 CelR-family transcriptional regulator compare
CCNA_01339 +1.3 5.4 ArsR-family transcriptional regulator compare
CCNA_01678 +1.3 6.2 arginine N-succinyltransferase, beta chain compare
CCNA_03635 +1.3 1.5 hypothetical protein compare
CCNA_01186 +1.2 4.9 hypothetical protein compare
CCNA_02878 +1.2 1.4 hypothetical protein compare
CCNA_00998 +1.2 5.7 ROS/MUCR transcriptional regulator compare
CCNA_01575 +1.2 7.3 glucose / sorbosone dehydrogenase compare
CCNA_01375 +1.2 4.4 lactoylglutathione lyase compare
CCNA_02910 +1.2 9.5 TonB-dependent receptor compare
CCNA_03940 +1.2 2.5 hypothetical protein compare
CCNA_02081 +1.2 2.8 Sec-independent protein translocase protein tatB compare
CCNA_00129 +1.2 5.6 hypothetical protein compare
CCNA_00945 +1.2 5.7 chemotaxis protein MotD compare
CCNA_03622 +1.2 6.4 beta-lactamase repressor compare
CCNA_03400 +1.2 2.0 hypothetical protein compare
CCNA_00929 +1.2 7.7 Riboflavin-specific deaminase family protein compare
CCNA_01949 +1.2 3.4 bactofilin A BacA compare
CCNA_01414 +1.2 6.7 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_00947 +1.2 8.3 flagellar hook protein FlgE compare
CCNA_00031 +1.2 5.9 toxin protein VapC compare
CCNA_00264 +1.2 7.5 C4-dicarboxylate transport protein compare
CCNA_01748 +1.2 6.4 methyltransferase compare
CCNA_02252 +1.2 3.4 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_00954 +1.2 7.8 AAA-family response regulator flbD compare
CCNA_01505 +1.2 2.6 hypothetical protein compare
CCNA_01533 +1.2 4.7 hypothetical protein compare
CCNA_01827 +1.2 4.8 cobyric acid synthase CobQ compare
CCNA_01802 +1.2 2.4 hypothetical protein compare
CCNA_00347 +1.2 5.0 hypothetical protein compare
CCNA_02942 +1.2 4.1 nucleoside-diphosphate-sugar epimerase compare
CCNA_00750 +1.2 7.7 FeaR-family transcriptional regulator compare
CCNA_03391 +1.1 6.8 Cro/CI family transcriptional regulator compare
CCNA_01813 +1.1 6.2 tRNA-dihydrouridine synthase compare
CCNA_02309 +1.1 4.0 EF hand domain protein compare
CCNA_03136 +1.1 3.6 flagellar export protein FliJ compare
CCNA_03089 +1.1 5.5 hypothetical protein compare
CCNA_01926 +1.1 4.8 GGDEF diguanylate cyclase DgcB compare
CCNA_01594 +1.1 4.8 ribosomal protein L11 methyltransferase compare
CCNA_01677 +1.1 5.0 carboxypeptidase G2 precursor compare
CCNA_03214 +1.1 6.6 hypothetical protein compare
CCNA_02805 +1.1 5.4 hypothetical protein compare
CCNA_03949 +1.1 4.5 hypothetical protein compare
CCNA_00352 +1.1 6.3 integral membrane protein compare
CCNA_01942 +1.1 4.3 Rrf2 family protein compare
CCNA_01415 +1.1 8.0 methyltransferase compare
CCNA_03062 +1.1 6.3 cell wall hydrolase family protein compare
CCNA_01008 +1.1 8.0 urocanate hydratase compare
CCNA_00448 +1.1 5.7 cheU protein compare
CCNA_02976 +1.1 4.6 MCP-signal associated domain protein compare
CCNA_00400 +1.1 4.6 MarR/EmrR-family transcriptional regulator compare
CCNA_02125 +1.1 8.0 polar development protein podJ compare
CCNA_00807 +1.1 1.6 ribonuclease P protein component compare
CCNA_01025 +1.1 5.9 hypothetical protein compare
CCNA_00438 +1.1 3.0 hypothetical protein compare
CCNA_02324 +1.1 7.0 heat shock protein 33 hsp33 compare
CCNA_01235 +1.1 6.1 AcrR-family transcriptional regulator compare
CCNA_02026 +1.1 3.2 hypothetical protein compare
CCNA_02841 +1.1 2.7 hypothetical protein compare
CCNA_03215 +1.1 6.7 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_00992 +1.1 7.2 hypothetical protein compare
CCNA_03515 +1.1 5.7 hypothetical protein compare
CCNA_01184 +1.1 5.6 MutT/nudix family hydrolase compare
CCNA_03689 +1.1 7.5 alanine dehydrogenase compare
CCNA_02687 +1.1 5.3 serine-pyruvate aminotransferase compare
CCNA_01826 +1.1 5.9 vitamin B12 receptor compare
CCNA_03938 +1.1 2.8 hypothetical protein compare
CCNA_01338 +1.1 5.0 glyoxalase family protein compare
CCNA_01060 +1.1 3.3 type I protein secretion ATP-binding protein RsaD compare
CCNA_02560 +1.1 6.3 stalk cross-band protein StpC compare
CCNA_01006 +1.1 3.5 flagellar hook-basal body complex protein FliE compare
CCNA_00847 +1.1 6.6 leucine-responsive regulatory protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Maltose monohydrate in Caulobacter crescentus NA1000

For carbon source D-Maltose monohydrate across organisms