Experiment set1IT020 for Caulobacter crescentus NA1000

Compare to:

D-Maltose monohydrate carbon source

Group: carbon source
Media: M2_noCarbon + D-Maltose monohydrate (20 mM)
Culturing: Caulo_ML2, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 5.7 generations
By: Jayashree on 22-Mar-17
Media components: 1.74 g/L Disodium phosphate, 1.06 g/L Potassium phosphate monobasic, 0.5 g/L Ammonium chloride, 0.5 mM Magnesium sulfate, 0.5 mM Calcium chloride, 0.01 mM Iron (II) sulfate heptahydrate, 0.008 mM EDTA
Growth plate: 1522 A3

Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Maltose monohydrate in Caulobacter crescentus NA1000

For carbon source D-Maltose monohydrate across organisms

SEED Subsystems

Subsystem #Specific
Entner-Doudoroff Pathway 1
Glycolysis and Gluconeogenesis 1
Glycolysis and Gluconeogenesis, including Archaeal enzymes 1
Pyruvate metabolism I: anaplerotic reactions, PEP 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
anaerobic energy metabolism (invertebrates, cytosol) 7 5 1
Entner-Doudoroff pathway I 9 9 1
Entner-Doudoroff pathway III (semi-phosphorylative) 9 6 1
Entner-Doudoroff pathway II (non-phosphorylative) 9 4 1
Rubisco shunt 10 8 1
glycolysis IV 10 7 1
glycolysis V (Pyrococcus) 10 6 1
glycolysis III (from glucose) 11 10 1
glycolysis II (from fructose 6-phosphate) 11 9 1
glycolysis VI (from fructose) 11 8 1
homolactic fermentation 12 10 1
glycolysis I (from glucose 6-phosphate) 13 10 1
Bifidobacterium shunt 15 11 1
mixed acid fermentation 16 9 1
glycerol degradation to butanol 16 9 1
superpathway of glycolysis and the Entner-Doudoroff pathway 17 14 1
superpathway of glucose and xylose degradation 17 12 1
superpathway of anaerobic energy metabolism (invertebrates) 17 12 1
heterolactic fermentation 18 12 1
superpathway of hexitol degradation (bacteria) 18 12 1
superpathway of anaerobic sucrose degradation 19 14 1
hexitol fermentation to lactate, formate, ethanol and acetate 19 11 1
superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle 22 18 1
superpathway of N-acetylneuraminate degradation 22 12 1
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass 26 22 1
photosynthetic 3-hydroxybutanoate biosynthesis (engineered) 26 19 1
1-butanol autotrophic biosynthesis (engineered) 27 18 1