Experiment set1IT019 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Chloramphenicol 12.5 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_4009 -3.0 -9.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1613 -2.7 -5.0 septum site-determining protein MinC compare
Psyr_0383 -2.6 -3.0 Twin-arginine translocation protein TatB compare
Psyr_0259 -2.3 -4.3 Osmolarity sensor protein envZ compare
Psyr_4008 -2.3 -15.4 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_1268 -2.3 -7.5 extracellular solute-binding protein, family 3:SLT compare
Psyr_4007 -2.2 -10.2 Secretion protein HlyD compare
Psyr_4140 -2.2 -3.9 Protein of unknown function DUF140 compare
Psyr_0857 -2.1 -3.4 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_4340 -2.1 -8.0 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -2.1 -6.4 thiazole-phosphate synthase compare
Psyr_0535 -2.0 -3.2 toluene tolerance protein, putative compare
Psyr_4203 -2.0 -2.3 SsrA-binding protein compare
Psyr_1910 -2.0 -5.2 VacJ-like lipoprotein compare
Psyr_1544 -1.9 -4.7 SirA-like protein compare
Psyr_1614 -1.8 -3.5 lipid A biosynthesis acyltransferase compare
Psyr_1639 -1.7 -8.0 ribosomal large subunit pseudouridine synthase C conserved
Psyr_2980 -1.7 -3.6 UDP-glucose pyrophosphorylase compare
Psyr_4341 -1.7 -6.6 thiamine-phosphate diphosphorylase compare
Psyr_0014 -1.7 -3.8 lipid A biosynthesis acyltransferase compare
Psyr_1907 -1.7 -3.4 GTP cyclohydrolase I compare
Psyr_0524 -1.6 -3.3 Lipopolysaccharide kinase compare
Psyr_4141 -1.6 -5.0 ABC transporter compare
Psyr_1373 -1.6 -2.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_4887 -1.5 -8.9 Peptidase S41A, C-terminal protease compare
Psyr_0044 -1.5 -2.1 transferase hexapeptide repeat protein compare
Psyr_0215 -1.4 -8.4 Exodeoxyribonuclease III xth compare
Psyr_0137 -1.4 -2.1 outer membrane transport energization protein ExbD compare
Psyr_0579 -1.4 -8.6 RNAse R compare
Psyr_2823 -1.3 -2.2 hypothetical protein compare
Psyr_0202 -1.3 -7.2 transcriptional regulator, LysR family compare
Psyr_3691 -1.3 -5.6 conserved hypothetical protein compare
Psyr_4091 -1.2 -3.5 8-oxo-dGTPase compare
Psyr_2779 -1.2 -2.5 Phage minor tail compare
Psyr_3701 -1.2 -2.1 thioredoxin, putative compare
Psyr_4989 -1.2 -3.9 hypothetical protein compare
Psyr_0081 -1.2 -2.0 ABC transporter compare
Psyr_2151 -1.2 -1.6 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_4788 -1.2 -2.5 lipoprotein, putative compare
Psyr_4566 -1.2 -6.8 Peptidase M23B compare
Psyr_0849 -1.2 -6.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0475 -1.2 -2.5 Protein of unknown function YGGT compare
Psyr_2312 -1.2 -1.4 Protein of unknown function DUF24 compare
Psyr_4683 -1.2 -3.4 dethiobiotin synthase compare
Psyr_3581 -1.1 -4.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_5029 -1.1 -1.8 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_0498 -1.1 -3.2 Protein of unknown function DUF1445 compare
Psyr_1751 -1.1 -3.8 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2802 -1.1 -3.1 lipoprotein, putative compare
Psyr_3202 -1.1 -1.6 NADH dehydrogenase subunit G compare
Psyr_3954 -1.0 -3.7 GTP-binding protein LepA compare
Psyr_2808 -1.0 -2.1 hypothetical protein compare
Psyr_1418 -1.0 -2.2 Radical SAM compare
Psyr_1419 -1.0 -2.1 preQ(0) biosynthesis protein QueC compare
Psyr_2134 -1.0 -2.0 protein of unknown function DUF903 compare
Psyr_1187 -1.0 -2.3 type III chaperone protein ShcE compare
Psyr_2894 -1.0 -1.7 conserved hypothetical protein compare
Psyr_0571 -1.0 -2.5 tRNA isopentenyltransferase compare
Psyr_3055 -1.0 -2.0 Aminoglycoside phosphotransferase compare
Psyr_0575 -1.0 -2.6 protease FtsH subunit HflC compare
Psyr_5133 -1.0 -2.7 tRNA modification GTPase trmE compare
Psyr_0927 -1.0 -3.1 hypothetical protein compare
Psyr_3281 -1.0 -1.7 Glycoside hydrolase, family 3, N-terminal compare
Psyr_1193 -1.0 -2.1 type III helper protein HrpZ1 compare
Psyr_4464 -1.0 -1.3 lipoprotein, putative compare
Psyr_4139 -1.0 -3.9 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2921 -1.0 -1.5 ADP-ribosylglycohydrolase compare
Psyr_4822 -1.0 -2.4 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_3013 -0.9 -1.5 magnesium chelatase subunit ChlD compare
Psyr_1850 -0.9 -2.3 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase compare
Psyr_0951 -0.9 -1.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_2253 -0.9 -2.2 Phosphonate metabolism compare
Psyr_3005 -0.9 -2.0 3-oxoadipate enol-lactonase compare
Psyr_0179 -0.9 -2.6 Protein of unknown function DUF1289 compare
Psyr_2487 -0.9 -2.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_4362 -0.9 -2.2 Rare lipoprotein A compare
Psyr_0541 -0.9 -2.2 Small multidrug resistance protein compare
Psyr_0373 -0.9 -1.5 CDS compare
Psyr_0845 -0.9 -2.0 conserved hypothetical protein compare
Psyr_0724 -0.9 -1.6 conserved hypothetical protein compare
Psyr_1530 -0.9 -2.2 hypothetical protein compare
Psyr_3142 -0.9 -1.4 general secretion pathway protein N, putative compare
Psyr_3567 -0.9 -1.9 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_2243 -0.9 -1.8 Endoribonuclease L-PSP compare
Psyr_2383 -0.8 -1.9 Protein of unknown function DUF72 compare
Psyr_0510 -0.8 -2.8 conserved hypothetical protein compare
Psyr_1780 -0.8 -1.1 transcriptional regulator, TetR family compare
Psyr_1417 -0.8 -3.8 TPR repeat protein compare
Psyr_0947 -0.8 -3.4 TPR repeat protein:TPR repeat protein compare
Psyr_5132 -0.8 -1.5 Glucose-inhibited division protein A subfamily compare
Psyr_2409 -0.8 -2.4 Protein of unknown function DUF1185 compare
Psyr_4138 -0.8 -2.3 Toluene tolerance compare
Psyr_2557 -0.8 -1.3 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_1227 -0.8 -1.8 Queuosine biosynthesis protein compare
Psyr_1930 -0.8 -2.5 hypothetical protein compare
Psyr_1487 -0.8 -2.1 conserved hypothetical protein compare
Psyr_0917 -0.8 -4.4 ABC-2 compare
Psyr_2546 -0.8 -2.9 DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump compare
Psyr_4055 -0.8 -2.2 conserved domain protein compare
Psyr_3000 -0.8 -1.3 methyltransferase, putative compare
Psyr_RNA28 -0.8 -1.1 tRNA-Val compare
Psyr_3644 -0.7 -1.9 prephenate dehydrogenase compare
Psyr_3840 -0.7 -1.4 conserved hypothetical protein compare
Psyr_3311 -0.7 -2.2 Virulence factor MVIN-like protein compare
Psyr_2502 -0.7 -2.4 conserved hypothetical protein compare
Psyr_3084 -0.7 -2.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1163 -0.7 -2.0 Isochorismatase hydrolase compare
Psyr_3287 -0.7 -0.9 DNA topoisomerase I compare
Psyr_0493 -0.7 -1.3 CheW-like protein compare
Psyr_2851 -0.7 -1.5 conserved hypothetical protein compare
Psyr_2617 -0.7 -1.6 Secretion protein HlyD compare
Psyr_0918 -0.7 -4.7 ABC transporter compare
Psyr_0201 -0.7 -3.9 ATP-dependent DNA helicase RecG compare
Psyr_3342 -0.7 -1.7 conserved hypothetical protein compare
Psyr_0356 -0.7 -1.3 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_0830 -0.7 -2.7 Poly(A) polymerase compare
Psyr_4309 -0.7 -2.8 hypothetical protein compare
Psyr_1975 -0.7 -1.4 Integrase, catalytic region compare
Psyr_4167 -0.7 -2.1 Rare lipoprotein A compare
Psyr_1410 -0.7 -2.2 Holliday junction DNA helicase RuvB compare
Psyr_1097 -0.7 -1.0 glycine cleavage system H protein compare
Psyr_0827 -0.7 -2.5 pantothenate synthetase compare
Psyr_3739 -0.7 -1.4 conserved hypothetical protein compare
Psyr_3315 -0.7 -1.2 conserved hypothetical protein compare
Psyr_4991 -0.7 -1.0 hypothetical protein compare
Psyr_2540 -0.7 -1.3 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_2282 -0.7 -4.5 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_2189 -0.6 -2.7 transcriptional regulator, ArsR family compare
Psyr_1667 -0.6 -2.7 Colicin V production protein compare
Psyr_0941 -0.6 -3.3 Conserved hypothetical protein 92 compare
Psyr_0376 -0.6 -2.0 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_2987 -0.6 -2.2 Cof protein:HAD-superfamily hydrolase, subfamily IIB compare
Psyr_2977 -0.6 -2.4 cointegrate resolution protein T compare
Psyr_4051 -0.6 -1.3 transcriptional regulator, ArsR family compare
Psyr_0637 -0.6 -2.4 LrgB-like protein compare
Psyr_4351 -0.6 -2.0 conserved domain protein compare
Psyr_3349 -0.6 -3.1 conserved hypothetical protein compare
Psyr_4414 -0.6 -2.5 precorrin-3 methyltransferase compare
Psyr_1162 -0.6 -2.1 conserved hypothetical protein compare
Psyr_3640 -0.6 -1.5 conserved hypothetical protein compare
Psyr_4068 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0195 -0.6 -3.7 conserved hypothetical protein compare
Psyr_2462 -0.6 -2.3 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_3519 -0.6 -2.5 hypothetical protein compare
Psyr_3992 -0.6 -2.9 Protein of unknown function DUF477 compare
Psyr_1935 -0.6 -2.8 Protein of unknown function DUF796 compare
Psyr_4063 -0.6 -3.1 Protein of unknown function DUF1111 compare
Psyr_4512 -0.6 -2.4 putative phage-related protein compare
Psyr_0734 -0.6 -1.9 Protein of unknown function DUF159 compare
Psyr_1573 -0.6 -1.6 cyclic nucleotide-binding protein compare
Psyr_3377 -0.6 -1.6 transcriptional regulator, MarR family compare
Psyr_4297 -0.6 -3.0 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_4804 -0.6 -1.4 conserved hypothetical protein compare
Psyr_3293 -0.6 -1.2 UspA compare
Psyr_4696 -0.6 -2.4 transcriptional regulator, LacI family compare
Psyr_2472 -0.6 -2.7 transcriptional regulator, MerR family compare
Psyr_4480 -0.6 -1.0 outer membrane transport energization protein TonB compare
Psyr_3862 -0.6 -1.4 conserved hypothetical protein compare
Psyr_2350 -0.6 -0.9 Protein of unknown function UPF0025 compare
Psyr_3357 -0.6 -1.1 transcriptional regulator, LysR family compare
Psyr_3776 -0.6 -1.6 Cytosine deaminase compare
Psyr_4437 -0.6 -2.2 hypothetical protein compare
Psyr_4693 -0.6 -2.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0473 -0.6 -2.2 Methionine biosynthesis MetW compare
Psyr_0565 -0.6 -2.8 Protein of unknown function UPF0126 compare
Psyr_4932 -0.6 -3.8 agmatine deiminase compare
Psyr_2419 -0.6 -2.2 Protein of unknown function DUF480 compare
Psyr_2875 -0.6 -1.6 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2363 -0.6 -2.9 Phenazine biosynthesis PhzC/PhzF protein compare
Psyr_1270 -0.6 -0.9 conserved hypothetical protein compare
Psyr_1984 -0.6 -1.9 3-isopropylmalate dehydratase, small subunit compare
Psyr_1791 -0.6 -1.5 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_1924 -0.6 -2.3 hypothetical protein compare
Psyr_1251 -0.6 -1.6 quinoprotein compare
Psyr_0574 -0.6 -2.1 protease FtsH subunit HflK compare
Psyr_3854 -0.6 -0.7 OmpA/MotB compare
Psyr_3067 -0.5 -2.9 conserved hypothetical protein compare
Psyr_1719 -0.5 -1.2 conserved hypothetical protein compare
Psyr_3114 -0.5 -2.1 methyl-accepting chemotaxis sensory transducer compare
Psyr_2990 -0.5 -1.7 conserved hypothetical protein compare
Psyr_4933 -0.5 -2.9 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_1447 -0.5 -1.0 conserved hypothetical protein compare
Psyr_4596 -0.5 -1.3 conserved hypothetical protein compare
Psyr_1140 -0.5 -1.5 Disulfide bond formation protein DsbB compare
Psyr_0318 -0.5 -1.8 cell division protein ZapA compare
Psyr_3164 -0.5 -3.4 Protein of unknown function UPF0005 compare
Psyr_2171 -0.5 -1.2 HpcH/HpaI aldolase compare
Psyr_1138 -0.5 -1.3 GCN5-related N-acetyltransferase compare
Psyr_1821 -0.5 -2.6 GCN5-related N-acetyltransferase compare
Psyr_2272 -0.5 -2.0 Helix-turn-helix motif protein compare
Psyr_3547 -0.5 -1.9 transcriptional regulator, TetR family compare
Psyr_1405 -0.5 -1.6 hypothetical protein compare
Psyr_2999 -0.5 -1.3 LmbE-like protein compare
Psyr_2095 -0.5 -1.8 Conserved TM helix compare
Psyr_0132 -0.5 -1.3 conserved hypothetical protein compare
Psyr_2064 -0.5 -1.9 conserved hypothetical protein compare
Psyr_4422 -0.5 -2.6 Protein of unknown function DUF461 compare
Psyr_0907 -0.5 -1.3 conserved hypothetical protein compare
Psyr_4381 -0.5 -4.0 arginine decarboxylase compare
Psyr_3698 -0.5 -1.7 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare


Specific Phenotypes

For 1 genes in this experiment

For stress Chloramphenicol in Pseudomonas syringae pv. syringae B728a

For stress Chloramphenicol across organisms