Experiment set1IT018 for Lysobacter sp. OAE881

200 most important genes:

gene	name	fitness	t score	description
ABIE51_RS06595		-4.7	-1.4	MGMT family protein
ABIE51_RS10645		-4.6	-1.4	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
ABIE51_RS15410		-4.0	-1.2	FHA domain-containing protein
ABIE51_RS09355		-3.7	-1.5	lipopolysaccharide assembly protein LapA domain-containing protein
ABIE51_RS14885		-2.9	-1.4	DUF1428 domain-containing protein
ABIE51_RS15390		-2.7	-1.6	5-(carboxyamino)imidazole ribonucleotide synthase
ABIE51_RS14555		-2.6	-2.1	M15 family metallopeptidase
ABIE51_RS05045		-2.5	-2.2	Holliday junction branch migration protein RuvA
ABIE51_RS14085		-2.3	-3.0	DUF6165 family protein
ABIE51_RS05005		-2.1	-1.0	PhzF family phenazine biosynthesis isomerase
ABIE51_RS09205		-2.0	-2.6	BON domain-containing protein
ABIE51_RS06170		-1.9	-3.2	SPOR domain-containing protein
ABIE51_RS17665		-1.9	-2.0	mitochondrial fission ELM1 family protein
ABIE51_RS07575		-1.8	-3.7	FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein
ABIE51_RS16485		-1.7	-1.5	adenosylhomocysteinase
ABIE51_RS18715		-1.6	-1.2	DUF2784 domain-containing protein
ABIE51_RS17190		-1.6	-4.7	penicillin-binding protein 1A
ABIE51_RS16330		-1.6	-1.8	hotdog fold domain-containing protein
ABIE51_RS13480		-1.6	-1.8	phytoene/squalene synthase family protein
ABIE51_RS09720		-1.6	-1.8	response regulator
ABIE51_RS17060		-1.5	-4.1	phosphoglycerate kinase
ABIE51_RS02300		-1.5	-3.9	lauroyl acyltransferase
ABIE51_RS16015		-1.4	-1.4	aspartate carbamoyltransferase catalytic subunit
ABIE51_RS18475		-1.4	-1.8	HAD family phosphatase
ABIE51_RS19265		-1.3	-6.2	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
ABIE51_RS14485		-1.3	-1.2	MOSC domain-containing protein
ABIE51_RS12620		-1.3	-1.3	fumarate hydratase
ABIE51_RS17630		-1.3	-3.1	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
ABIE51_RS11455		-1.2	-2.0	DNA translocase FtsK
ABIE51_RS02785		-1.2	-1.0	DUF2946 family protein
ABIE51_RS10235		-1.2	-1.1	pyridoxamine 5'-phosphate oxidase family protein
ABIE51_RS13205		-1.2	-1.9	hydroxymethylglutaryl-CoA lyase
ABIE51_RS15415		-1.2	-1.9	DUF3301 domain-containing protein
ABIE51_RS06015		-1.2	-1.0	methylisocitrate lyase
ABIE51_RS14860		-1.1	-1.2	VOC family protein
ABIE51_RS04390		-1.1	-4.9	glycoside hydrolase family 99-like domain-containing protein
ABIE51_RS07390		-1.1	-1.5	glycosyl hydrolase
ABIE51_RS09365		-1.0	-3.1	glycosyltransferase family 4 protein
ABIE51_RS08690		-1.0	-1.3	cytochrome c-type biogenesis protein
ABIE51_RS17095		-1.0	-3.9	type I glyceraldehyde-3-phosphate dehydrogenase
ABIE51_RS09065		-1.0	-5.3	UDP-glucose/GDP-mannose dehydrogenase family protein
ABIE51_RS04905		-1.0	-2.3	lactoylglutathione lyase
ABIE51_RS05540		-1.0	-1.1	hypothetical protein
ABIE51_RS06480		-1.0	-0.9	Smr/MutS family protein
ABIE51_RS15520		-1.0	-4.2	magnesium/cobalt transporter CorA
ABIE51_RS13655		-1.0	-3.0	hypothetical protein
ABIE51_RS11735		-1.0	-1.6	AarF/UbiB family protein
ABIE51_RS05975		-1.0	-3.1	class II 3-deoxy-7-phosphoheptulonate synthase
ABIE51_RS16365		-1.0	-1.9	glycine cleavage system aminomethyltransferase GcvT
ABIE51_RS04245		-1.0	-2.4	fumarylacetoacetate hydrolase family protein
ABIE51_RS08885		-0.9	-0.8	cell division protein ZipA
ABIE51_RS02855		-0.9	-1.9	2-keto-4-pentenoate hydratase
ABIE51_RS14995		-0.9	-1.6	hypothetical protein
ABIE51_RS15970		-0.9	-2.1	HPr(Ser) kinase/phosphatase
ABIE51_RS10550		-0.9	-1.7	2-dehydro-3-deoxy-6-phosphogalactonate aldolase
ABIE51_RS14070		-0.9	-2.4	glycosyltransferase family 9 protein
ABIE51_RS13315		-0.9	-1.0	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
ABIE51_RS12360		-0.9	-2.7	hypothetical protein
ABIE51_RS01515		-0.9	-3.1	phospholipase D family protein
ABIE51_RS06545		-0.9	-3.7	ribosome rescue GTPase HflX
ABIE51_RS01330		-0.9	-2.6	hypothetical protein
ABIE51_RS04805		-0.9	-1.3	A24 family peptidase
ABIE51_RS12600		-0.9	-1.1	cold-shock protein
ABIE51_RS07595		-0.9	-0.4	enoyl-CoA hydratase/isomerase family protein
ABIE51_RS16785		-0.8	-2.7	flagellar motor switch protein FliG
ABIE51_RS06325		-0.8	-2.0	alpha/beta hydrolase
ABIE51_RS10725		-0.8	-2.9	penicillin-binding protein activator LpoB
ABIE51_RS00490		-0.8	-0.9	protein-export chaperone SecB
ABIE51_RS04370		-0.8	-3.8	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
ABIE51_RS11055		-0.8	-1.6	CDF family Co(II)/Ni(II) efflux transporter DmeF
ABIE51_RS10900		-0.8	-1.5	2-dehydro-3-deoxygalactonokinase
ABIE51_RS08725		-0.8	-1.0	heme ABC exporter ATP-binding protein CcmA
ABIE51_RS07415		-0.8	-1.2	histidine phosphatase family protein
ABIE51_RS05245		-0.8	-1.0	chemotaxis protein CheW
ABIE51_RS06500		-0.8	-2.0	peptidoglycan DD-metalloendopeptidase family protein
ABIE51_RS18485		-0.8	-1.8	class I SAM-dependent methyltransferase
ABIE51_RS16375		-0.8	-1.3	NfeD family protein
ABIE51_RS17950		-0.8	-2.9	6-carboxytetrahydropterin synthase QueD
ABIE51_RS17635		-0.8	-2.8	O-antigen ligase
ABIE51_RS09095		-0.8	-2.9	metalloregulator ArsR/SmtB family transcription factor
ABIE51_RS08700		-0.8	-3.8	heme lyase CcmF/NrfE family subunit
ABIE51_RS12090		-0.8	-1.2	arsenic resistance N-acetyltransferase ArsN2
ABIE51_RS08165		-0.8	-1.1	DUF4010 domain-containing protein
ABIE51_RS03960		-0.8	-0.5	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
ABIE51_RS04970		-0.8	-1.0	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
ABIE51_RS09340		-0.8	-1.7	(d)CMP kinase
ABIE51_RS06630		-0.8	-1.7	ROK family protein
ABIE51_RS14255		-0.8	-2.2	phosphatase PAP2 family protein
ABIE51_RS03250		-0.8	-1.7	hypothetical protein
ABIE51_RS18820		-0.7	-1.5	NADP-dependent malic enzyme
ABIE51_RS13700		-0.7	-3.1	MurR/RpiR family transcriptional regulator
ABIE51_RS14880		-0.7	-1.9	RNA polymerase sigma factor
ABIE51_RS03815		-0.7	-0.6	cbb3-type cytochrome oxidase assembly protein CcoS
ABIE51_RS11295		-0.7	-1.5	SDR family oxidoreductase
ABIE51_RS03280		-0.7	-5.0	NrdJb
ABIE51_RS05165		-0.7	-1.8	hypothetical protein
ABIE51_RS06040		-0.7	-2.6	cell wall hydrolase
ABIE51_RS13395		-0.7	-1.8	acetylglutamate kinase
ABIE51_RS10830		-0.7	-0.9	MBL fold metallo-hydrolase
ABIE51_RS02380		-0.7	-0.8	hypothetical protein
ABIE51_RS05440		-0.7	-2.0	23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
ABIE51_RS02695		-0.7	-0.9	hypothetical protein
ABIE51_RS15905		-0.7	-3.1	DUF3108 domain-containing protein
ABIE51_RS09045		-0.7	-1.7	GntR family transcriptional regulator
ABIE51_RS16125		-0.7	-2.3	cytochrome b
ABIE51_RS18090		-0.7	-2.1	fimbria/pilus periplasmic chaperone
ABIE51_RS10040		-0.7	-1.5	Ohr family peroxiredoxin
ABIE51_RS14005		-0.7	-1.5	histidine triad nucleotide-binding protein
ABIE51_RS17560		-0.7	-2.6	aminotransferase class IV
ABIE51_RS14570		-0.7	-2.3	DNA-3-methyladenine glycosylase
ABIE51_RS19200		-0.7	-1.9	hypothetical protein
ABIE51_RS04990		-0.7	-0.7	YceH family protein
ABIE51_RS07875		-0.7	-0.6	alpha/beta hydrolase
ABIE51_RS04645		-0.7	-0.5	3,4-dihydroxy-2-butanone-4-phosphate synthase
ABIE51_RS13535		-0.7	-2.9	M48 family metallopeptidase
ABIE51_RS03270		-0.7	-5.8	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
ABIE51_RS08040		-0.6	-2.9	glucose-6-phosphate isomerase
ABIE51_RS16455		-0.6	-1.3	class I SAM-dependent methyltransferase
ABIE51_RS10870		-0.6	-1.1	N-acetylmuramoyl-L-alanine amidase
ABIE51_RS13065		-0.6	-1.1	hypothetical protein
ABIE51_RS11855		-0.6	-1.0	hypothetical protein
ABIE51_RS18555		-0.6	-1.2	cysteine hydrolase family protein
ABIE51_RS06130		-0.6	-1.9	hypothetical protein
ABIE51_RS07540		-0.6	-1.7	phosphate ABC transporter permease subunit PstC
ABIE51_RS02680		-0.6	-2.1	hypothetical protein
ABIE51_RS06065		-0.6	-2.0	ATP-binding protein
ABIE51_RS16240		-0.6	-1.7	CBS domain-containing protein
ABIE51_RS12865		-0.6	-1.7	VOC family protein
ABIE51_RS04920		-0.6	-0.3	trehalose-phosphatase
ABIE51_RS03030		-0.6	-1.0	DUF484 family protein
ABIE51_RS17640		-0.6	-2.8	glycosyltransferase
ABIE51_RS16490		-0.6	-3.6	methylenetetrahydrofolate reductase [NAD(P)H]
ABIE51_RS14225		-0.6	-1.6	phosphate regulon sensor histidine kinase PhoR
ABIE51_RS05180		-0.6	-2.0	glycosyltransferase
ABIE51_RS05275		-0.6	-1.7	3'(2'),5'-bisphosphate nucleotidase CysQ
ABIE51_RS07815		-0.6	-2.0	carbon storage regulator CsrA
ABIE51_RS11195		-0.6	-1.1	metalloregulator ArsR/SmtB family transcription factor
ABIE51_RS17535		-0.6	-2.5	hypothetical protein
ABIE51_RS10965		-0.6	-1.0	DUF6491 family protein
ABIE51_RS17525		-0.6	-3.3	homoserine kinase
ABIE51_RS18740		-0.6	-2.9	hypothetical protein
ABIE51_RS09090		-0.6	-1.4	homocysteine S-methyltransferase family protein
ABIE51_RS06280		-0.6	-1.3	hypothetical protein
ABIE51_RS11715		-0.6	-2.0	GIY-YIG nuclease family protein
ABIE51_RS06575		-0.6	-1.6	hemolysin family protein
ABIE51_RS17580		-0.6	-1.2	3-isopropylmalate dehydratase small subunit
ABIE51_RS14315		-0.6	-1.8	MarR family transcriptional regulator
ABIE51_RS08555		-0.6	-1.2	PspC domain-containing protein
ABIE51_RS09665		-0.6	-0.8	MFS transporter
ABIE51_RS04290		-0.6	-4.4	UDP-glucose 4-epimerase GalE
ABIE51_RS08705		-0.5	-1.9	cytochrome c maturation protein CcmE
ABIE51_RS02705		-0.5	-1.9	hypothetical protein
ABIE51_RS09965		-0.5	-0.9	AraC family transcriptional regulator
ABIE51_RS04975		-0.5	-1.6	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
ABIE51_RS02280		-0.5	-1.8	CDP-glycerol glycerophosphotransferase family protein
ABIE51_RS09105		-0.5	-1.5	NAD-glutamate dehydrogenase domain-containing protein
ABIE51_RS01010		-0.5	-3.0	MlaE family lipid ABC transporter permease subunit
ABIE51_RS06490		-0.5	-1.3	protein-L-isoaspartate(D-aspartate) O-methyltransferase
ABIE51_RS10430		-0.5	-1.2	hypothetical protein
ABIE51_RS00730		-0.5	-0.8	5-demethoxyubiquinol-8 5-hydroxylase UbiM
ABIE51_RS11615		-0.5	-2.5	carbamoyl-phosphate synthase large subunit
ABIE51_RS05260		-0.5	-1.3	16S rRNA (uracil(1498)-N(3))-methyltransferase
ABIE51_RS04675		-0.5	-1.9	metal-dependent hydrolase
ABIE51_RS10940		-0.5	-0.9	SDR family oxidoreductase
ABIE51_RS17760		-0.5	-2.2	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
ABIE51_RS07410		-0.5	-1.8	polysaccharide pyruvyl transferase family protein
ABIE51_RS03550		-0.5	-1.4	HIT family protein
ABIE51_RS11920		-0.5	-2.1	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB
ABIE51_RS15125		-0.5	-1.6	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
ABIE51_RS16720		-0.5	-3.0	flagellar hook-associated protein FlgL
ABIE51_RS08180		-0.5	-1.8	copper resistance protein NlpE
ABIE51_RS08010		-0.5	-1.6	tRNA-Glu
ABIE51_RS01550		-0.5	-1.3	MBL fold metallo-hydrolase
ABIE51_RS15885		-0.5	-1.3	DUF2066 domain-containing protein
ABIE51_RS07850		-0.5	-2.5	J domain-containing protein
ABIE51_RS14230		-0.5	-2.9	polyphosphate kinase 1
ABIE51_RS08905		-0.5	-2.4	DUF3011 domain-containing protein
ABIE51_RS01545		-0.5	-2.0	AAA family ATPase
ABIE51_RS10030		-0.5	-1.8	TorF family putative porin
ABIE51_RS11280		-0.5	-1.2	hypothetical protein
ABIE51_RS14835		-0.5	-1.8	cyclase family protein
ABIE51_RS17055		-0.5	-1.2	HAD hydrolase-like protein
ABIE51_RS15570		-0.5	-1.3	DUF3304 domain-containing protein
ABIE51_RS10885		-0.5	-0.8	MarC family NAAT transporter
ABIE51_RS14675		-0.5	-1.0	response regulator
ABIE51_RS14725		-0.5	-1.4	histidine kinase
ABIE51_RS02150		-0.5	-1.0	sigma-70 region 4 domain-containing protein
ABIE51_RS11000		-0.5	-2.3	alpha/beta-hydrolase family protein
ABIE51_RS07760		-0.5	-1.9	Mut7-C RNAse domain-containing protein
ABIE51_RS08960		-0.5	-1.2	YhdH/YhfP family quinone oxidoreductase
ABIE51_RS11220		-0.5	-1.9	hypothetical protein
ABIE51_RS09085		-0.5	-1.9	methionine synthase
ABIE51_RS10120		-0.5	-1.5	proton-conducting transporter membrane subunit
ABIE51_RS06155		-0.5	-0.9	DUF3224 domain-containing protein
ABIE51_RS16755		-0.5	-1.2	hypothetical protein
ABIE51_RS03295		-0.5	-0.7	hypothetical protein
ABIE51_RS17445		-0.5	-1.1	LON peptidase substrate-binding domain-containing protein
ABIE51_RS11650		-0.5	-2.0	heat-inducible transcriptional repressor HrcA
ABIE51_RS05580		-0.4	-1.5	hypothetical protein
ABIE51_RS06820		-0.4	-1.2	exodeoxyribonuclease VII small subunit

Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in carbon source experiments

For carbon source Sodium Fumarate dibasic across organisms