Experiment set1IT017 for Sinorhizobium meliloti 1021

Compare to:

Sodium succinate dibasic hexahydrate carbon source

200 most important genes:

  gene name fitness t score description  
SMc01494 -9.0 -6.2 phosphoserine phosphatase compare
SMc01726 -8.8 -6.1 acetylglutamate kinase compare
SMc02245 -8.3 -5.8 dihydroorotate dehydrogenase 2 compare
SMc00236 -8.2 -5.6 Indole-3-glycerol phosphate synthase compare
SMc02766 -8.1 -12.4 tryptophan synthase subunit beta compare
SMc01843 -8.1 -9.7 5,10-methylenetetrahydrofolate reductase compare
SMc04405 -8.0 -7.8 3-isopropylmalate dehydrogenase compare
SMc00495 -8.0 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02569 -7.9 -5.5 imidazole glycerol phosphate synthase subunit HisF compare
SMc02767 -7.8 -9.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02899 -7.6 -10.5 prephenate dehydratase compare
SMc03797 -7.6 -10.4 homoserine O-succinyltransferase compare
SMc00235 -7.6 -7.4 anthranilate phosphoribosyltransferase compare
SMc00640 -7.5 -7.3 phosphoserine aminotransferase compare
SMc00918 -7.5 -7.3 ATP phosphoribosyltransferase regulatory subunit compare
SMc02838 -7.3 -6.9 phosphoglyceromutase compare
SMc02572 -7.3 -5.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc02717 -7.2 -8.6 2-isopropylmalate synthase compare
SMc01028 -7.1 -11.9 phosphopyruvate hydratase compare
SMc03777 -7.1 -6.9 gamma-glutamyl phosphate reductase compare
SMc04045 -7.0 -8.4 dihydroxy-acid dehydratase compare
SMc02765 -7.0 -11.5 tryptophan synthase subunit alpha compare
SMc04002 -7.0 -10.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01361 -6.9 -4.8 dihydroorotase compare
SMc02725 -6.9 -14.1 anthranilate synthase compare
SMc00494 -6.8 -2.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMa1635 -6.8 -2.6 hypothetical protein compare
SMc00917 -6.8 -6.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02562 -6.7 -9.1 phosphoenolpyruvate carboxykinase compare
SMc01431 -6.6 -14.2 acetolactate synthase 3 catalytic subunit compare
SMc02217 -6.6 -7.9 O-succinylhomoserine sulfhydrylase compare
SMc03776 -6.6 -4.5 gamma-glutamyl kinase compare
SMc04028 -6.5 -18.3 glutamate synthase compare
SMc04026 -6.4 -11.6 glutamate synthase compare
SM_b21174 -6.3 -7.4 phosphate uptake ABC transporter permease compare
SMc03981 -6.3 -6.8 phosphoglycerate kinase compare
SMc00554 -6.3 -9.6 amidophosphoribosyltransferase compare
SMc01004 -6.3 -11.4 phosphoribosyl-AMP cyclohydrolase compare
SMc03826 -6.2 -4.3 argininosuccinate synthase compare
SMc01054 -6.1 -5.0 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc01801 -6.1 -3.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02165 -6.0 -9.2 orotate phosphoribosyltransferase compare
SMc00488 -5.9 -16.3 phosphoribosylformylglycinamidine synthase II compare
SMc03823 -5.9 -11.6 isopropylmalate isomerase large subunit compare
SMc00412 -5.8 -5.6 orotidine 5'-phosphate decarboxylase compare
SMc02574 -5.7 -7.9 imidazoleglycerol-phosphate dehydratase compare
SMc00131 -5.6 -18.4 transcriptional regulator compare
SMc03112 -5.6 -15.6 B12-dependent methionine synthase compare
SMc00614 -5.6 -8.7 phosphoribosylglycinamide formyltransferase compare
SMc02570 -5.6 -5.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03229 -5.6 -3.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00615 -5.6 -7.5 phosphoribosylaminoimidazole synthetase compare
SMc00993 -5.5 -12.4 phosphoribosylamine--glycine ligase compare
SMc04088 -5.4 -8.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03979 -5.4 -3.7 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02137 -5.4 -7.3 ornithine carbamoyltransferase compare
SMc02307 -5.3 -10.2 histidinol dehydrogenase compare
SMc03763 -5.1 -3.5 cytosine-specific methyltransferase compare
SMc03978 -5.0 -3.5 transketolase compare
SMc01215 -5.0 -3.4 carbamoyl phosphate synthase large subunit compare
SMc00090 -4.9 -11.0 sulfate adenylyltransferase compare
SMc01569 -4.9 -2.5 carbamoyl phosphate synthase small subunit compare
SMc00092 -4.9 -11.8 phosphoadenosine phosphosulfate reductase compare
SMc00641 -4.8 -7.9 D-3-phosphoglycerate dehydrogenase compare
SMc01360 -4.8 -5.7 aspartate carbamoyltransferase catalytic subunit compare
SMc02124 -4.8 -14.6 nitrite reductase compare
SMc02755 -4.7 -9.6 S-adenosyl-L-homocysteine hydrolase compare
SMc00876 -4.7 -8.4 ATP-binding MRP protein compare
SMc00493 -4.6 -5.4 phosphoribosylformylglycinamidine synthase I compare
SMc01880 -4.6 -4.5 pantoate--beta-alanine ligase compare
SMc02138 -4.6 -5.1 acetylornithine transaminase compare
SMc04001 -4.6 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01770 -4.5 -2.0 serine hydroxymethyltransferase compare
SMc02123 -4.5 -5.6 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02166 -4.5 -10.3 dihydroorotase compare
SMc00017 -4.4 -2.3 homoserine kinase compare
SMc00711 -4.4 -5.0 cyclohexadienyl dehydrogenase compare
SMc01139 -4.4 -7.6 RNA polymerase factor sigma-54 compare
SMc00293 -4.4 -7.5 homoserine dehydrogenase compare
SMc02246 -4.3 -1.6 hypothetical protein compare
SMc03795 -4.3 -2.2 isopropylmalate isomerase small subunit compare
SM_b21176 -4.2 -7.0 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00294 -4.2 -9.2 aminotransferase compare
SM_b21175 -4.2 -8.0 phosphate uptake ABC transporter permease compare
SM_b21177 -4.2 -10.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc03069 -4.2 -4.2 6-phosphogluconolactonase compare
SMc02707 -4.1 -5.6 hypothetical protein compare
SMc01053 -3.9 -5.2 siroheme synthase compare
SM_b20611 -3.8 -15.1 C4-dicarboxylate transporter DctA conserved
SM_b20612 -3.7 -13.1 C4-dicarboxylate transport sensor protein conserved
SMc00091 -3.7 -12.0 sulfate adenylyltransferase compare
SMc01881 -3.6 -4.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SM_b20613 -3.6 -9.6 C4-dicarboxylate transport transcriptional regulator compare
SMc04346 -3.4 -3.7 ketol-acid reductoisomerase compare
SMc00815 -3.4 -3.2 inosine 5'-monophosphate dehydrogenase compare
SMc01440 -2.8 -6.5 hydrolase serine protease transmembrane protein compare
SMc00963 -2.4 -6.1 hypothetical protein compare
SMc01441 -2.3 -5.7 membrane bound protease compare
SMc00450 -2.2 -2.8 protoheme IX farnesyltransferase compare
SMc04213 -2.0 -3.1 diacylglycerol kinase compare
SMc02058 -1.8 -2.4 YAJC protein compare
SMc01207 -1.8 -3.0 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02975 -1.8 -9.2 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMc01430 -1.7 -2.4 acetolactate synthase 3 regulatory subunit compare
SMc01206 -1.6 -2.2 queuine tRNA-ribosyltransferase compare
SMc00414 -1.6 -9.3 hypothetical protein compare
SMc02363 -1.5 -3.4 cytochrome C-type biogenesis transmembrane protein compare
SMc00982 -1.4 -6.3 dioxygenase compare
SMc02856 -1.4 -7.1 penicillin-binding protein compare
SMc01501 -1.4 -3.6 mannitol 2-dehydrogenase compare
SM_b20823 -1.4 -7.3 cell surface saccharide synthesis protein compare
SMc01187 -1.4 -3.1 rare lipoprotein A compare
SMc02983 -1.3 -5.8 ornithine, DAP, or arginine decarboxylase compare
SMc01842 -1.3 -1.4 methyltransferase transcription regulator protein compare
SMc02102 -1.3 -4.4 hypothetical protein compare
SMc00709 -1.3 -4.1 hypothetical protein compare
SMc01578 -1.2 -6.8 aspartate aminotransferase compare
SMc02425 -1.2 -4.5 transcriptional regulator compare
SMc02786 -1.2 -7.0 translocase transmembrane protein compare
SMc02753 -1.2 -1.7 PTS system transporter subunit IIA compare
SMc00295 -1.2 -1.0 hypothetical protein compare
SMc00981 -1.2 -5.0 ferredoxin protein compare
SMc00580 -1.2 -3.0 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMa0886 -1.2 -2.0 hypothetical protein compare
SMc00166 -1.2 -1.7 oxidoreductase NAD protein compare
SMc02659 -1.1 -4.5 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc01124 -1.1 -4.6 PII uridylyl-transferase compare
SMc04000 -1.1 -0.8 hypothetical protein compare
SMc03993 -1.1 -4.2 hypothetical protein compare
SMc01858 -1.1 -1.5 S-adenosyl-methyltransferase MraW compare
SMc00067 -1.1 -7.0 outer-membranne lipoprotein compare
SMc00987 -1.1 -2.1 hypothetical protein compare
SMc00513 -1.1 -4.8 amino acid-binding periplasmic protein compare
SMc00334 -1.1 -1.2 cytidylate kinase compare
SMc02897 -1.1 -3.3 cytochrome C transmembrane protein compare
SMc01568 -1.0 -1.6 hypothetical protein compare
SMc02115 -1.0 -0.9 hypothetical protein compare
SMc02434 -1.0 -3.0 hypothetical protein compare
SMc01438 -1.0 -4.1 protease precursor signal peptide protein compare
SMc02338 -1.0 -1.8 periplasmic binding ABC transporter protein compare
SMc02362 -1.0 -2.1 cytochrome c-type biogenesis protein CcmE compare
SMc00914 -1.0 -3.8 oxidoreductase compare
SMc01852 -0.9 -6.1 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc00012 -0.9 -1.2 cytochrome C oxidase assembly protein compare
SMa1765 -0.9 -1.1 hypothetical protein compare
SMc02451 -0.9 -1.8 hypothetical protein compare
SMa0753 -0.9 -0.9 hypothetical protein compare
SMc02894 -0.9 -1.2 hypothetical protein compare
SMc02172 -0.9 -4.7 transcriptional regulator compare
SMc02833 -0.9 -1.5 penicillin-insensitive murein endopeptidase compare
SMc00169 -0.9 -7.0 malic enzyme compare
SMc00492 -0.9 -0.9 hypothetical protein compare
SMc04454 -0.9 -4.2 ABC transporter ATP-binding protein compare
SMc02521 -0.9 -2.9 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc00369 -0.9 -1.4 oxidoreductase compare
SM_b21501 -0.9 -2.2 hypothetical protein compare
SMa2020 -0.9 -2.5 Transcriptional regulator compare
SMc02683 -0.9 -2.1 hypothetical protein compare
SM_b20834 -0.9 -6.5 surface saccharide synthesis protein compare
SMc02077 -0.9 -2.5 exodeoxyribonuclease III protein compare
SMc02844 -0.8 -1.1 transcriptional regulator compare
SM_b21173 -0.8 -1.7 hypothetical protein compare
SMc02640 -0.8 -2.4 UDP-glucuronic acid epimerase compare
SMc01260 -0.8 -4.1 transcriptional regulator compare
SMc00838 -0.8 -4.2 hypothetical protein compare
SMc00560 -0.8 -1.6 hypothetical protein compare
SMc02582 -0.8 -2.4 hypothetical protein compare
SMc02407 -0.8 -3.5 hypothetical protein compare
SMc00404 -0.8 -0.8 hypothetical protein compare
SMc02909 -0.8 -1.3 transglycosylase transmembrane protein compare
SMc02861 -0.8 -0.9 phosphate transporter compare
SMc04432 -0.8 -2.4 hypothetical protein compare
SMc01454 -0.8 -4.9 hypothetical protein compare
SMc00579 -0.8 -3.1 dimethyladenosine transferase compare
SMc02862 -0.8 -4.2 Pit accessory protein compare
SMc03053 -0.8 -1.3 flagellar biosynthesis protein FliQ compare
SM_b20509 -0.8 -2.6 transcriptional regulator compare
SMc02573 -0.8 -0.9 hypothetical protein compare
SMc02505 -0.8 -1.1 hypothetical protein compare
SMa0955 -0.7 -1.8 GntR family transcriptional regulator compare
SMc01800 -0.7 -1.1 cytochrome C oxidase assembly transmembrane protein compare
SM_b20948 -0.7 -1.4 glucosyltransferase compare
SMc03980 -0.7 -2.1 hypothetical protein compare
SMc00726 -0.7 -0.7 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02812 -0.7 -1.5 hypothetical protein compare
SMc01119 -0.7 -1.4 hypothetical protein compare
SMc00353 -0.7 -1.9 transmembrane protein compare
SMc00010 -0.7 -1.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02084 -0.7 -0.9 biopolymer transport transmembrane protein compare
SMa0144 -0.7 -0.8 hypothetical protein compare
SMc01495 -0.7 -2.3 transcriptional regulator compare
SMc01522 -0.7 -1.5 hypothetical protein compare
SM_b20563 -0.7 -1.8 hypothetical protein compare
SMc00194 -0.7 -2.8 hypothetical protein compare
SMc02858 -0.7 -0.5 chaperone protein DnaJ compare
SMc03258 -0.7 -3.8 transcriptional regulator compare
SMc00013 -0.7 -1.4 cytochrome C oxidase subunit III transmembrane protein compare
SMc01845 -0.7 -1.4 transglycosylase transmembrane protein compare
SMa1095 -0.7 -0.7 hypothetical protein compare
SMc03028 -0.7 -1.6 flagellar basal body rod protein FlgC compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium succinate dibasic hexahydrate in Sinorhizobium meliloti 1021

For carbon source Sodium succinate dibasic hexahydrate across organisms