Experiment set1IT017 for Caulobacter crescentus NA1000
D-Mannose carbon source
Group: carbon sourceMedia: M2_noCarbon + D-Mannose (20 mM)
Culturing: Caulo_ML2, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 5.4 generations
By: Jayashree on 22-Mar-17
Media components: 1.74 g/L Disodium phosphate, 1.06 g/L Potassium phosphate monobasic, 0.5 g/L Ammonium chloride, 0.5 mM Magnesium sulfate, 0.5 mM Calcium chloride, 0.01 mM Iron (II) sulfate heptahydrate, 0.008 mM EDTA
Growth plate: 1521 D1
Specific Phenotypes
For 1 genes in this experiment
For carbon source D-Mannose in Caulobacter crescentus NA1000
For carbon source D-Mannose across organisms
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| D-mannose degradation II | 2 | 2 | 1 |
| D-sorbitol degradation I | 3 | 2 | 1 |
| sucrose degradation I (sucrose phosphotransferase) | 3 | 1 | 1 |
| sucrose degradation IV (sucrose phosphorylase) | 4 | 4 | 1 |
| mannitol degradation II | 4 | 3 | 1 |
| sucrose degradation III (sucrose invertase) | 4 | 3 | 1 |
| sucrose degradation VII (sucrose 3-dehydrogenase) | 4 | 2 | 1 |
| CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis | 4 | 1 | 1 |
| sucrose degradation II (sucrose synthase) | 5 | 4 | 1 |
| 1,5-anhydrofructose degradation | 5 | 3 | 1 |
| mannitol cycle | 5 | 2 | 1 |
| superpathway of CMP-sialic acids biosynthesis | 15 | 3 | 1 |
| heterolactic fermentation | 18 | 12 | 1 |
| superpathway of anaerobic sucrose degradation | 19 | 14 | 1 |