Experiment set1IT017 for Burkholderia phytofirmans PsJN

Compare to:

Tween 20 carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS09480 +2.0 2.3 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS00885 +1.6 3.6 chemotaxis protein CheY compare
BPHYT_RS03090 +1.6 1.7 hypothetical protein compare
BPHYT_RS18785 +1.6 2.7 flagellar assembly protein FliH compare
BPHYT_RS18925 +1.6 9.5 RNA polymerase sigma70 compare
BPHYT_RS18865 +1.6 7.5 flagellar L-ring protein FlgH compare
BPHYT_RS12550 +1.6 1.8 GTP-binding protein HflX compare
BPHYT_RS27390 +1.5 2.6 hydroxyacid dehydrogenase compare
BPHYT_RS02860 +1.5 1.7 membrane protein compare
BPHYT_RS12925 +1.5 1.6 exodeoxyribonuclease III compare
BPHYT_RS27330 +1.4 2.4 hypothetical protein compare
BPHYT_RS35750 +1.4 1.6 hypothetical protein compare
BPHYT_RS04010 +1.4 1.8 glycosyl transferase compare
BPHYT_RS08135 +1.3 2.1 hypothetical protein compare
BPHYT_RS17490 +1.3 2.0 haloacid dehalogenase compare
BPHYT_RS03400 +1.3 1.4 ATP-dependent DNA helicase RecG compare
BPHYT_RS16815 +1.3 1.6 ureidoglycolate hydrolase compare
BPHYT_RS18420 +1.3 1.6 hypothetical protein compare
BPHYT_RS04970 +1.3 2.8 superoxide dismutase compare
BPHYT_RS10540 +1.2 1.4 secretion protein compare
BPHYT_RS28595 +1.2 1.7 glyoxalase compare
BPHYT_RS22145 +1.2 1.8 phosphoesterase compare
BPHYT_RS18935 +1.2 6.8 flagellar biosynthesis regulator FlhF compare
BPHYT_RS18940 +1.2 7.2 flagellar biosynthesis protein FlhA compare
BPHYT_RS21625 +1.2 1.4 LysR family transcriptional regulator compare
BPHYT_RS20515 +1.2 1.5 alpha/beta hydrolase compare
BPHYT_RS24350 +1.2 2.1 hypothetical protein compare
BPHYT_RS29920 +1.2 1.1 hypothetical protein compare
BPHYT_RS18835 +1.2 1.4 flagellar biosynthesis protein FliR compare
BPHYT_RS21470 +1.2 2.2 6-hydroxynicotinate reductase compare
BPHYT_RS29175 +1.2 2.5 ABC transporter ATP-binding protein compare
BPHYT_RS10475 +1.2 1.6 mammalian cell entry protein compare
BPHYT_RS25285 +1.2 1.7 AraC family transcriptional regulator compare
BPHYT_RS18830 +1.2 5.3 flagellar biosynthesis protein FliQ compare
BPHYT_RS18800 +1.2 6.7 flagellar hook-length control protein compare
BPHYT_RS35480 +1.2 1.5 salicylyl-CoA 5-hydroxylase compare
BPHYT_RS11930 +1.1 2.6 3-hydroxybutyrate dehydrogenase compare
BPHYT_RS36365 +1.1 2.2 hypothetical protein compare
BPHYT_RS03990 +1.1 4.1 sugar ABC transporter substrate-binding protein compare
BPHYT_RS29250 +1.1 1.4 dihydrodipicolinate synthase compare
BPHYT_RS07130 +1.1 1.6 biopolymer transporter ExbD compare
BPHYT_RS31345 +1.1 1.4 malonate transporter compare
BPHYT_RS18945 +1.1 7.1 flagellar biosynthesis protein FlhB compare
BPHYT_RS18825 +1.1 4.0 flagellar biosynthesis protein FliP compare
BPHYT_RS18885 +1.1 4.9 flagellar basal body rod modification protein FlgD compare
BPHYT_RS18895 +1.1 4.9 flagellar basal body rod protein FlgB compare
BPHYT_RS33450 +1.1 1.4 LysR family transcriptional regulator compare
BPHYT_RS25000 +1.1 2.6 MFS transporter compare
BPHYT_RS32260 +1.1 1.3 hypothetical protein compare
BPHYT_RS18855 +1.1 3.7 flagellar rod assembly protein FlgJ compare
BPHYT_RS29820 +1.1 1.7 hypothetical protein compare
BPHYT_RS29620 +1.1 0.9 hypothetical protein compare
BPHYT_RS20970 +1.1 1.8 hypothetical protein compare
BPHYT_RS28025 +1.1 1.5 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS18780 +1.1 3.4 flagellar motor switch protein FliG compare
BPHYT_RS00920 +1.1 2.1 transposase compare
BPHYT_RS16265 +1.1 3.4 hypothetical protein compare
BPHYT_RS21805 +1.1 2.1 transcriptional regulator compare
BPHYT_RS20750 +1.0 0.8 LacI family transcriptional regulator compare
BPHYT_RS15835 +1.0 2.8 RNA polymerase subunit sigma24 compare
BPHYT_RS04750 +1.0 2.0 uroporphyrin-III C-methyltransferase compare
BPHYT_RS34280 +1.0 1.3 hypothetical protein compare
BPHYT_RS03980 +1.0 4.7 mannose-1-phosphate guanyltransferase compare
BPHYT_RS05585 +1.0 1.9 hypothetical protein compare
BPHYT_RS29520 +1.0 1.0 hypothetical protein compare
BPHYT_RS18775 +1.0 5.9 flagellar M-ring protein FliF compare
BPHYT_RS15545 +1.0 3.7 isoaspartyl peptidase compare
BPHYT_RS20170 +1.0 2.2 sugar transporter compare
BPHYT_RS28200 +1.0 1.8 sugar ABC transporter substrate-binding protein compare
BPHYT_RS34770 +1.0 6.2 chemotaxis protein compare
BPHYT_RS18875 +1.0 4.4 flagellar basal body rod protein FlgF compare
BPHYT_RS30235 +1.0 3.8 tartrate dehydrogenase compare
BPHYT_RS06350 +1.0 1.5 chemotaxis protein CheY compare
BPHYT_RS04560 +1.0 1.8 Hcp1 family type VI secretion system effector compare
BPHYT_RS10470 +1.0 1.4 hypothetical protein compare
BPHYT_RS03030 +1.0 3.2 cytochrome C compare
BPHYT_RS18880 +1.0 5.5 flagellar hook protein FlgE compare
BPHYT_RS33610 +1.0 0.8 DNA polymerase I compare
BPHYT_RS10040 +1.0 0.9 hypothetical protein compare
BPHYT_RS13515 +1.0 3.3 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS25780 +1.0 1.0 DeoR faimly transcriptional regulator compare
BPHYT_RS27230 +1.0 1.7 hypothetical protein compare
BPHYT_RS11050 +1.0 1.3 molecular chaperone compare
BPHYT_RS18860 +1.0 3.2 flagellar P-ring protein FlgI compare
BPHYT_RS18890 +1.0 3.7 flagellar basal body rod protein FlgC compare
BPHYT_RS08595 +1.0 1.0 multidrug transporter compare
BPHYT_RS34700 +1.0 2.3 arsenate reductase compare
BPHYT_RS07255 +1.0 2.1 4-oxalocrotonate decarboxylase compare
BPHYT_RS24665 +1.0 1.6 ABC transporter permease compare
BPHYT_RS30395 +1.0 2.3 small mechanosensitive ion channel protein MscS compare
BPHYT_RS31125 +1.0 1.7 hypothetical protein compare
BPHYT_RS02300 +0.9 1.2 acid shock protein compare
BPHYT_RS01565 +0.9 1.8 polyphosphate kinase compare
BPHYT_RS13815 +0.9 1.6 hypothetical protein compare
BPHYT_RS02435 +0.9 1.0 hypothetical protein compare
BPHYT_RS28280 +0.9 2.0 hypothetical protein compare
BPHYT_RS04990 +0.9 2.5 hypothetical protein compare
BPHYT_RS30375 +0.9 1.8 hypothetical protein compare
BPHYT_RS22765 +0.9 1.6 beta-galactosidase compare
BPHYT_RS16175 +0.9 1.3 hemolysin D compare
BPHYT_RS03875 +0.9 0.9 dehydrogenase compare
BPHYT_RS09690 +0.9 1.1 phosphate starvation-inducible protein PsiF compare
BPHYT_RS09905 +0.9 1.4 hypothetical protein compare
BPHYT_RS25440 +0.9 1.7 alanine dehydrogenase compare
BPHYT_RS15410 +0.9 2.0 hypothetical protein compare
BPHYT_RS22635 +0.9 3.3 dihydrodipicolinate synthase compare
BPHYT_RS24590 +0.9 1.0 DeoR faimly transcriptional regulator compare
BPHYT_RS21485 +0.9 1.0 hypothetical protein compare
BPHYT_RS04035 +0.9 2.5 transferase compare
BPHYT_RS30055 +0.9 1.7 hypothetical protein compare
BPHYT_RS34540 +0.9 2.3 short-chain dehydrogenase compare
BPHYT_RS25080 +0.9 1.6 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS15135 +0.9 1.9 3-ketoacyl-ACP reductase compare
BPHYT_RS24945 +0.9 1.6 alkylhydroperoxidase compare
BPHYT_RS34575 +0.9 3.0 phospholipase compare
BPHYT_RS36400 +0.9 1.0 hypothetical protein compare
BPHYT_RS27625 +0.9 1.8 transport-associated protein compare
BPHYT_RS18820 +0.9 1.3 flagellar biosynthesis protein FliO compare
BPHYT_RS08600 +0.9 1.1 hypothetical protein compare
BPHYT_RS04040 +0.9 2.3 hypothetical protein compare
BPHYT_RS12590 +0.9 1.2 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS00790 +0.9 1.1 conjugal transfer protein TraF compare
BPHYT_RS27785 +0.9 1.0 hypothetical protein compare
BPHYT_RS18795 +0.8 2.8 flagellar export protein FliJ compare
BPHYT_RS08490 +0.8 1.9 Crp/Fnr family transcriptional regulator compare
BPHYT_RS10500 +0.8 1.1 acetolactate synthase compare
BPHYT_RS04710 +0.8 1.2 hypothetical protein compare
BPHYT_RS10400 +0.8 0.9 taurine ABC transporter permease compare
BPHYT_RS32150 +0.8 1.1 hypothetical protein compare
BPHYT_RS18790 +0.8 3.7 ATP synthase compare
BPHYT_RS10345 +0.8 0.8 flagellar motor protein MotB compare
BPHYT_RS08485 +0.8 2.6 undecaprenyl-phosphate glucose phosphotransferase compare
BPHYT_RS08190 +0.8 1.2 type II secretion system protein compare
BPHYT_RS17050 +0.8 1.8 hypothetical protein compare
BPHYT_RS02760 +0.8 2.0 cytochrome BD oxidase subunit II compare
BPHYT_RS18810 +0.8 4.4 flagellar motor switch protein FliM compare
BPHYT_RS03380 +0.8 2.7 NAD(P) transhydrogenase subunit beta compare
BPHYT_RS28075 +0.8 0.8 cytochrome B561 compare
BPHYT_RS02930 +0.8 1.3 KpsF/GutQ family protein compare
BPHYT_RS25075 +0.8 1.2 AraC family transcriptional regulator compare
BPHYT_RS24245 +0.8 2.5 MerR family transcriptional regulator compare
BPHYT_RS32470 +0.8 1.1 membrane protein compare
BPHYT_RS23355 +0.8 1.4 membrane protein compare
BPHYT_RS18970 +0.8 5.1 chemotaxis protein compare
BPHYT_RS26050 +0.8 2.0 ABC transporter permease compare
BPHYT_RS27085 +0.8 1.4 alkylhydroperoxidase compare
BPHYT_RS27445 +0.8 1.9 hypothetical protein compare
BPHYT_RS22420 +0.8 0.9 membrane protein compare
BPHYT_RS35215 +0.8 0.8 dehydrogenase compare
BPHYT_RS27305 +0.8 1.3 hypothetical protein compare
BPHYT_RS02410 +0.8 1.5 alpha/beta hydrolase compare
BPHYT_RS14950 +0.8 2.9 hypothetical protein compare
BPHYT_RS27845 +0.8 1.7 beta-lactamase compare
BPHYT_RS34565 +0.8 1.3 chemotaxis protein compare
BPHYT_RS04055 +0.8 2.7 PST family polysaccharide export protein compare
BPHYT_RS33175 +0.8 1.3 hypothetical protein compare
BPHYT_RS09600 +0.8 1.5 hypothetical protein compare
BPHYT_RS01060 +0.8 3.2 alcohol dehydrogenase compare
BPHYT_RS36250 +0.8 1.6 hypothetical protein compare
BPHYT_RS13745 +0.8 2.3 membrane protein compare
BPHYT_RS07860 +0.8 1.8 benzoate 1,2-dioxygenase subunit beta compare
BPHYT_RS30915 +0.8 1.5 hypothetical protein compare
BPHYT_RS18930 +0.8 2.4 flagellar biosynthesis protein FlhG compare
BPHYT_RS17765 +0.8 3.9 toluene ABC transporter ATP-binding protein compare
BPHYT_RS35770 +0.8 0.7 glyoxalase compare
BPHYT_RS15800 +0.8 1.8 GntR family transcriptional regulator compare
BPHYT_RS26890 +0.8 2.1 LysR family transcriptional regulator compare
BPHYT_RS00815 +0.8 0.8 hypothetical protein compare
BPHYT_RS26390 +0.8 0.8 antibiotic resistance protein compare
BPHYT_RS06485 +0.8 1.6 globin compare
BPHYT_RS06020 +0.8 3.0 hypothetical protein compare
BPHYT_RS36420 +0.8 2.0 hypothetical protein compare
BPHYT_RS32905 +0.8 2.0 FAD-linked oxidase compare
BPHYT_RS29805 +0.8 1.7 lysine transporter LysE compare
BPHYT_RS32760 +0.8 2.6 LysR family transcriptional regulator compare
BPHYT_RS36150 +0.8 1.3 hypothetical protein compare
BPHYT_RS27505 +0.8 2.1 hypothetical protein compare
BPHYT_RS05690 +0.8 1.5 hypothetical protein compare
BPHYT_RS01120 +0.8 1.3 plasmid partitioning protein ParB compare
BPHYT_RS24495 +0.8 1.4 transcriptional regulator compare
BPHYT_RS04905 +0.8 1.5 quinol oxidase compare
BPHYT_RS19620 +0.8 1.8 general secretion pathway protein GspH compare
BPHYT_RS01230 +0.8 2.2 DNA-binding protein compare
BPHYT_RS16590 +0.8 3.1 Fis family transcriptional regulator compare
BPHYT_RS22755 +0.8 1.7 LacI family transcription regulator compare
BPHYT_RS28350 +0.8 1.6 fatty acid desaturase compare
BPHYT_RS18900 +0.8 4.2 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS03985 +0.8 3.9 undecaprenyl-phosphate glucose phosphotransferase compare
BPHYT_RS04095 +0.8 0.8 SAM-dependent methyltransferase PhcB compare
BPHYT_RS01940 +0.8 2.0 16S rRNA methyltransferase compare
BPHYT_RS30140 +0.8 0.6 3-methylitaconate isomerase compare
BPHYT_RS04755 +0.7 2.2 AraC family transcriptional regulator compare
BPHYT_RS11395 +0.7 1.6 hypothetical protein compare
BPHYT_RS18635 +0.7 1.7 LamB/YcsF family protein compare
BPHYT_RS22930 +0.7 0.7 type II secretion system protein compare
BPHYT_RS34920 +0.7 1.4 IclR family transcriptional regulator compare
BPHYT_RS27120 +0.7 1.6 hypothetical protein compare
BPHYT_RS11060 +0.7 1.3 4-hydroxybenzoate 3-monooxygenase compare
BPHYT_RS06345 +0.7 2.8 sensor histidine kinase compare
BPHYT_RS31260 +0.7 1.1 histidine kinase compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source Tween 20 in Burkholderia phytofirmans PsJN

For carbon source Tween 20 across organisms