Experiment set1IT016 for Sinorhizobium meliloti 1021

Compare to:

Sodium pyruvate carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc02145 +0.9 1.5 signal peptide protein compare
SMc00802 +0.9 1.0 hypothetical protein compare
SM_b20086 +0.8 1.3 hypothetical protein compare
SMc01280 +0.8 2.6 protease compare
SMc01223 +0.8 3.3 transcriptional regulator compare
SMc01127 +0.8 3.8 hypothetical protein compare
SMc01153 +0.8 1.3 enoyl-CoA hydratase compare
SMc04359 +0.8 4.6 transmembrane protein compare
SMa0882 +0.8 1.5 hypothetical protein compare
SMc04094 +0.8 2.1 hypothetical protein compare
SMc04357 +0.8 3.1 hypothetical protein compare
SMc00351 +0.8 1.2 hypothetical protein compare
SMc01419 +0.8 2.0 RNA polymerase sigma factor protein compare
SM_b20117 +0.7 1.8 sugar transferase compare
SMa0314 +0.7 2.4 hypothetical protein compare
SMa5033 +0.7 1.3 hypothetical protein compare
SMa1240 +0.7 1.2 NapF ferredoxin component of periplasmic nitrate reductase compare
SMa0575 +0.7 1.8 hypothetical protein compare
SM_b21347 +0.7 1.5 pectin degradation protein compare
SM_b20296 +0.7 2.6 permease compare
SMc01418 +0.7 3.4 signal peptide protein compare
SMc02906 +0.7 0.8 hypothetical protein compare
SMc02544 +0.7 0.9 hypothetical protein compare
SMc00712 +0.7 1.4 hypothetical protein compare
SM_b21669 +0.7 1.8 hypothetical protein compare
SMc04352 +0.7 3.3 signal peptide protein compare
SMc04239 +0.7 1.8 hypothetical protein compare
SM_b20806 +0.7 3.4 hypothetical protein compare
SMc02697 +0.7 1.0 hypothetical protein compare
SMa1570 +0.7 1.6 PilA2 pilus assembly protein compare
SMc02617 +0.6 2.9 hypothetical protein compare
SM_b20701 +0.6 1.0 hypothetical protein compare
SMc00337 +0.6 1.5 hypothetical protein compare
SMc03785 +0.6 1.6 dinucleoside polyphosphate hydrolase compare
SMc04389 +0.6 2.1 hydroxypyruvate reductase compare
SMa1639 +0.6 1.2 hypothetical protein compare
SMc00806 +0.6 2.2 hypothetical protein compare
SM_b21170 +0.6 3.6 guanylate kinase compare
SMc04224 +0.6 0.9 hypothetical protein compare
SMa0643 +0.6 1.4 transposase compare
SM_b21395 +0.6 2.1 hypothetical protein compare
SMc04085 +0.6 1.8 hypothetical protein compare
SMc03827 +0.6 2.8 amino acid efflux transmembrane protein compare
SMc02497 +0.6 1.9 hypothetical protein compare
SMc00566 +0.6 2.5 hypothetical protein compare
SM_b21120 +0.6 2.2 hypothetical protein compare
SMc02121 +0.6 0.8 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02693 +0.6 0.7 peptidyl-tRNA hydrolase compare
SMc01669 +0.6 2.1 enoyl-CoA hydratase compare
SM_b20050 +0.6 1.9 hypothetical protein compare
SMc04360 +0.6 2.4 hypothetical protein compare
SMc02039 +0.6 2.8 oxidoreductase compare
SMa1456 +0.5 2.9 hypothetical protein compare
SMa1007 +0.5 1.9 copper protein compare
SMc01471 +0.5 1.4 cytochrome C oxidase assembly factor transmembrane protein compare
SMc04362 +0.5 4.2 transporter compare
SMc00656 +0.5 0.8 hypothetical protein compare
SMa0846 +0.5 1.0 transposase, fragment compare
SMc01943 +0.5 1.9 2-hydroxyacid dehydrogenase compare
SMa0450 +0.5 1.2 hypothetical protein compare
SMc04351 +0.5 3.2 transmembrane ATP-binding ABC transporter protein compare
SMc01024 +0.5 1.0 preprotein translocase subunit SecG compare
SMc00041 +0.5 2.2 hypothetical protein compare
SM_b21487 +0.5 4.0 cytochrome o ubiquinol oxidase subunit II compare
SMc03092 +0.5 1.6 transcriptional regulator compare
SMc04235 +0.5 3.0 tRNA-dihydrouridine synthase A compare
SM_b20257 +0.5 2.0 adenylate cyclase compare
SMc03781 +0.5 1.7 rRNA large subunit methyltransferase compare
SMc03836 +0.5 0.8 acyl-CoA thioesterase i protein compare
SM_b21263 +0.5 3.4 mureinpeptideoligopeptide ABC transporter permease compare
SMa2389 +0.5 1.7 OsmC-like protein compare
SMc01930 +0.5 1.8 hypothetical protein compare
SMc01242 +0.5 2.0 signal peptide protein compare
SM_b21509 +0.5 1.0 plasmid stability protein compare
SMc04441 +0.5 2.3 hypothetical protein compare
SMc00404 +0.5 0.7 hypothetical protein compare
SMa1078 +0.5 1.9 hypothetical protein compare
SMc02860 +0.5 1.8 hypothetical protein compare
SMc04343 +0.5 2.9 adenylate/guanylate cyclase transmembrane protein compare
SMc04462 +0.5 2.4 glycerate dehydrogenase compare
SM_b20279 +0.5 1.9 hypothetical protein compare
SMc04202 +0.5 2.2 transmembrane protein compare
SM_b21296 +0.5 1.1 hypothetical protein compare
SM_b21271 +0.5 2.6 nucleotide-binding protein compare
SMa0543 +0.5 1.0 hypothetical protein compare
SMc02908 +0.5 2.0 recombination protein RecR compare
SMc01981 +0.5 1.7 cytochrome C transmembrane protein compare
SMc01404 +0.5 1.4 aspartate racemase compare
SMc04143 +0.5 2.5 transcriptional regulator compare
SMc02859 +0.5 2.3 hypothetical protein compare
SMc03751 +0.5 1.7 hypothetical protein compare
SMc01508 +0.5 1.5 hypothetical protein compare
SMa0121 +0.5 1.4 hypothetical protein compare
SMc02615 +0.5 1.2 signal peptide protein compare
SMa2355 +0.5 2.4 DNA polymerase IV compare
SMa1200 +0.5 1.7 hypothetical protein compare
SMc00341 +0.5 1.7 hypothetical protein compare
SMc02143 +0.5 2.2 phosphate ABC transporter permease compare
SM_b20963 +0.5 2.6 transcriptional regulator compare
SMa0683 +0.5 1.9 Cation efflux protein compare
SM_b21262 +0.5 4.0 mureinpeptideoligopeptide ABC transporter permease compare
SMc01410 +0.5 1.3 lipoprotein transmembrane compare
SMa1136 +0.4 1.5 hypothetical protein compare
SMc02266 +0.4 1.3 hypothetical protein compare
SMc00174 +0.4 2.5 hypothetical protein compare
SMa0816 +0.4 1.2 FixX ferredoxin-like protein compare
SMc01979 +0.4 2.0 sugar transport system permease ABC transporter protein compare
SMa1368 +0.4 1.6 hypothetical protein compare
SM_b22002 +0.4 1.1 epoxide hydrolase compare
SMc01933 +0.4 1.0 hypothetical protein compare
SM_b21636 +0.4 1.5 ferredoxin reductase electron transfer protein compare
SMc02367 +0.4 2.6 sensor histidine kinase transmembrane protein compare
SMc01204 +0.4 3.4 transmembrane oxidoreductase compare
SMc01144 +0.4 1.5 ribonuclease PH compare
SMa1921 +0.4 1.0 hypothetical protein compare
SMa0191 +0.4 1.9 hypothetical protein compare
SM_b20670 +0.4 1.8 hypothetical protein compare
SMc02366 +0.4 3.3 transcriptional regulator compare
SMc04436 +0.4 1.8 hypothetical protein compare
SMa5015 +0.4 0.7 hypothetical protein compare
SM_b21633 +0.4 0.7 enoyl-CoA hydratase compare
SM_b21569 +0.4 1.2 transcriptional regulator compare
SMc02287 +0.4 2.5 DNA-invertase compare
SMc03963 +0.4 2.4 sulfolipid biosynthesis protein compare
SM_b20398 +0.4 1.5 hypothetical protein compare
SMc03900 +0.4 3.4 cyclic beta-1,2-glucan ABc transporter compare
SMc04363 +0.4 3.2 hypothetical protein compare
SMa1675 +0.4 2.3 hypothetical protein compare
SMa2089 +0.4 1.3 hypothetical protein compare
SMc00403 +0.4 2.2 NOL1/NOP2/SUN family signature protein compare
SMc03127 +0.4 1.0 ABC transporter permease compare
SMc01275 +0.4 2.6 ribosomal large subunit pseudouridine synthase C protein compare
SMc03961 +0.4 2.6 sulfolipid (UDP-sulfoquinovose) biosynthesis protein compare
SMc02720 +0.4 1.1 ATP-dependent Clp protease proteolytic subunit compare
SMc02941 +0.4 1.5 hypothetical protein compare
SM_b20083 +0.4 1.7 hypothetical protein compare
SMa1262 +0.4 2.1 hypothetical protein compare
SMc00484 +0.4 2.0 hypothetical protein compare
SMa1161 +0.4 1.8 hypothetical protein compare
SMa0197 +0.4 2.3 ABC transporter permease compare
SMc02490 +0.4 3.0 hypothetical protein compare
SMc03154 +0.4 2.1 hypothetical protein compare
SMc03180 +0.4 1.7 monovalent cation/H+ antiporter subunit C compare
SMc01506 +0.4 3.3 RNA polymerase sigma factor compare
SM_b20072 +0.4 1.7 rhizopine binding protein compare
SMc00030 +0.4 2.0 hypothetical protein compare
SMc01089 +0.4 0.7 hypothetical protein compare
SMc01577 +0.4 1.1 hypothetical protein compare
SMa0992 +0.4 1.2 hypothetical protein compare
SMc01556 +0.4 0.9 hypothetical protein compare
SMa0211 +0.4 0.7 hypothetical protein compare
SMc01116 +0.4 2.5 acyltransferase transmembrane protein compare
SMc04341 +0.4 2.4 amino acid-binding periplasmic protein compare
SM_b20131 +0.4 1.3 oxidoreductase compare
SMc04229 +0.4 3.3 hypothetical protein compare
SMc01034 +0.4 1.3 hypothetical protein compare
SMa0838 +0.4 1.1 SyrA protein involved in EPS production compare
SMc00983 +0.4 1.9 hypothetical protein compare
SMc02389 +0.4 2.6 hypothetical protein compare
SMc04092 +0.4 1.0 hypothetical protein compare
SMa1170 +0.4 0.9 hypothetical protein compare
SMc01175 +0.4 2.3 oxidoreductase compare
SMc02118 +0.4 2.5 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data) compare
SMc00496 +0.4 0.6 hypothetical protein compare
SMc00352 +0.4 0.9 acetyltransferase compare
SMc04382 +0.4 3.7 beta-(1,2)-glucan production associated transmembrane protein compare
SMc01666 +0.4 1.9 methionine gamma-lyase compare
SM_b20256 +0.4 1.3 hypothetical protein compare
SMc04232 +0.4 0.6 glycine rich transmembrane protein compare
SMc01589 +0.4 2.1 hypothetical protein compare
SMa0514 +0.4 2.3 gluconate kinase compare
SM_b20294 +0.4 0.8 transcriptional regulator NanR compare
SM_b21096 +0.4 0.7 amino acid transporter ABC transporter ATP-binding protein compare
SMc03899 +0.4 0.5 hypothetical protein compare
SMc03176 +0.4 1.5 hypothetical protein compare
SMa5016 +0.4 2.1 hypothetical protein compare
SMc05001 +0.4 1.7 hypothetical protein compare
SMa1067 +0.4 2.5 transcriptional regulator compare
SMc02864 +0.4 1.5 molybdopterin biosynthesis protein MoeB compare
SMc01531 +0.4 1.9 2-dehydro-3-deoxygluconokinase compare
SMc02304 +0.4 1.8 hypothetical protein compare
SMc00665 +0.4 1.3 hypothetical protein compare
SM_b20097 +0.4 2.1 oxidoreductase compare
SMc01039 +0.4 1.1 hypothetical protein compare
SMc02976 +0.4 2.1 transcriptional regulator compare
SMa1124 +0.4 1.4 hypothetical protein compare
SMc02504 +0.4 1.3 transcriptional regulator compare
SMc01504 +0.4 3.0 two-component response regulator compare
SMa0772 +0.4 1.5 NodL Nod factor acetyltransferase compare
SMc01464 +0.4 1.8 hypothetical protein compare
SMc02844 +0.4 0.6 transcriptional regulator compare
SMc01203 +0.4 1.7 hypothetical protein compare
SMa0149 +0.4 1.4 transcription elongation factor regulatory protein compare
SMa0636 +0.4 2.2 hypothetical protein compare
SMa1279 +0.4 0.7 NorE accessory protein for nitric oxide reductase compare
SM_b20172 +0.4 1.6 cytochrome c protein compare
SMc03293 +0.4 1.8 hypothetical protein compare
SMc04030 +0.4 2.0 hypothetical protein compare
SMc00244 +0.4 2.5 ABC transporter permease compare
SMc04052 +0.4 0.8 transcriptional regulator compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium pyruvate in Sinorhizobium meliloti 1021

For carbon source Sodium pyruvate across organisms