Experiment set1IT014 for Lysobacter sp. OAE881

Compare to:

D-Glucuronic Acid carbon source

200 most important genes:

  gene name fitness t score description  
ABIE51_RS09235 -4.1 -1.4 hypothetical protein compare
ABIE51_RS10670 -2.8 -0.9 LysR family transcriptional regulator compare
ABIE51_RS16015 -2.7 -1.8 aspartate carbamoyltransferase catalytic subunit compare
ABIE51_RS09780 -2.7 -1.8 cytochrome o ubiquinol oxidase subunit IV compare
ABIE51_RS08775 -2.6 -2.5 pseudouridine synthase compare
ABIE51_RS14555 -2.1 -2.3 M15 family metallopeptidase compare
ABIE51_RS08520 -2.0 -1.2 response regulator transcription factor compare
ABIE51_RS16970 -1.9 -1.1 sensor histidine kinase compare
ABIE51_RS01880 -1.9 -2.5 pteridine-dependent deoxygenase compare
ABIE51_RS04570 -1.9 -1.7 general secretion pathway protein GspN compare
ABIE51_RS05550 -1.8 -1.3 hypothetical protein compare
ABIE51_RS10285 -1.8 -1.3 SDR family oxidoreductase compare
ABIE51_RS17630 -1.8 -4.9 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase compare
ABIE51_RS09105 -1.8 -1.7 NAD-glutamate dehydrogenase domain-containing protein compare
ABIE51_RS13485 -1.7 -2.1 phosphoglycolate phosphatase compare
ABIE51_RS12280 -1.7 -2.2 phasin family protein compare
ABIE51_RS04370 -1.6 -5.4 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABIE51_RS14085 -1.6 -1.8 DUF6165 family protein compare
ABIE51_RS15510 -1.6 -2.0 transporter associated domain-containing protein compare
ABIE51_RS06595 -1.5 -1.0 MGMT family protein compare
ABIE51_RS12540 -1.4 -1.9 folate-binding protein YgfZ compare
ABIE51_RS05180 -1.4 -3.5 glycosyltransferase compare
ABIE51_RS04920 -1.4 -0.6 trehalose-phosphatase compare
ABIE51_RS19265 -1.4 -6.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABIE51_RS02280 -1.4 -4.0 CDP-glycerol glycerophosphotransferase family protein compare
ABIE51_RS10250 -1.4 -1.3 YetF domain-containing protein compare
ABIE51_RS04390 -1.3 -5.8 glycoside hydrolase family 99-like domain-containing protein compare
ABIE51_RS10585 -1.3 -1.8 hypothetical protein compare
ABIE51_RS04385 -1.3 -1.8 CoA transferase subunit B compare
ABIE51_RS04095 -1.3 -3.1 sodium:calcium antiporter compare
ABIE51_RS04805 -1.3 -1.8 A24 family peptidase compare
ABIE51_RS02265 -1.3 -1.5 glycosyltransferase family 2 protein compare
ABIE51_RS04645 -1.3 -0.9 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
ABIE51_RS14995 -1.3 -1.3 hypothetical protein compare
ABIE51_RS07945 -1.2 -2.0 hypothetical protein compare
ABIE51_RS15725 -1.2 -0.9 SUF system Fe-S cluster assembly regulator compare
ABIE51_RS04310 -1.2 -1.8 glycosyltransferase compare
ABIE51_RS13780 -1.2 -1.7 YigZ family protein compare
ABIE51_RS07415 -1.2 -2.0 histidine phosphatase family protein compare
ABIE51_RS11455 -1.2 -1.9 DNA translocase FtsK compare
ABIE51_RS10480 -1.1 -1.0 helix-turn-helix domain-containing protein compare
ABIE51_RS17190 -1.1 -3.1 penicillin-binding protein 1A compare
ABIE51_RS04245 -1.1 -2.2 fumarylacetoacetate hydrolase family protein compare
ABIE51_RS10880 -1.1 -3.8 L,D-transpeptidase compare
ABIE51_RS17060 -1.1 -2.6 phosphoglycerate kinase compare
ABIE51_RS11030 -1.1 -2.2 xanthine dehydrogenase family protein subunit M compare
ABIE51_RS14885 -1.1 -0.9 DUF1428 domain-containing protein compare
ABIE51_RS15400 -1.1 -2.3 Trm112 family protein compare
ABIE51_RS09045 -1.1 -2.5 GntR family transcriptional regulator compare
ABIE51_RS15620 -1.1 -3.6 dTDP-glucose 4,6-dehydratase compare
ABIE51_RS10645 -1.1 -0.7 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein compare
ABIE51_RS14255 -1.1 -3.0 phosphatase PAP2 family protein compare
ABIE51_RS16365 -1.0 -2.7 glycine cleavage system aminomethyltransferase GcvT compare
ABIE51_RS09390 -1.0 -2.3 glycine zipper 2TM domain-containing protein compare
ABIE51_RS10940 -1.0 -1.9 SDR family oxidoreductase compare
ABIE51_RS00995 -1.0 -2.0 STAS domain-containing protein compare
ABIE51_RS18820 -1.0 -1.9 NADP-dependent malic enzyme compare
ABIE51_RS09425 -1.0 -1.8 helix-turn-helix domain-containing protein compare
ABIE51_RS15660 -1.0 -0.8 PhzF family phenazine biosynthesis protein compare
ABIE51_RS09225 -1.0 -1.2 30S ribosomal protein S18 compare
ABIE51_RS11370 -0.9 -1.1 VOC family protein compare
ABIE51_RS03800 -0.9 -1.8 hypothetical protein compare
ABIE51_RS10830 -0.9 -1.1 MBL fold metallo-hydrolase compare
ABIE51_RS04125 -0.9 -2.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE51_RS17665 -0.9 -1.6 mitochondrial fission ELM1 family protein compare
ABIE51_RS00640 -0.9 -3.3 hypothetical protein compare
ABIE51_RS07870 -0.9 -0.7 hypothetical protein compare
ABIE51_RS01360 -0.9 -2.0 nitrogen regulation protein NR(I) compare
ABIE51_RS17915 -0.9 -1.1 low affinity iron permease family protein compare
ABIE51_RS17635 -0.9 -4.1 O-antigen ligase compare
ABIE51_RS10970 -0.9 -1.1 hypothetical protein compare
ABIE51_RS05305 -0.9 -3.2 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS08140 -0.9 -2.3 biotin-dependent carboxyltransferase family protein compare
ABIE51_RS13550 -0.9 -1.3 tRNA-Ala compare
ABIE51_RS07575 -0.8 -2.5 FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein compare
ABIE51_RS18495 -0.8 -3.1 FtsX-like permease family protein compare
ABIE51_RS11665 -0.8 -3.5 outer membrane protein assembly factor BamE compare
ABIE51_RS15570 -0.8 -2.1 DUF3304 domain-containing protein compare
ABIE51_RS02575 -0.8 -0.6 HlyD family secretion protein compare
ABIE51_RS01645 -0.8 -1.6 MmcQ/YjbR family DNA-binding protein compare
ABIE51_RS03960 -0.8 -0.6 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA compare
ABIE51_RS02110 -0.8 -2.3 DUF1203 domain-containing protein compare
ABIE51_RS10115 -0.8 -1.2 NADH-quinone oxidoreductase subunit K compare
ABIE51_RS10840 -0.8 -0.5 ferritin-like domain-containing protein compare
ABIE51_RS11475 -0.8 -2.0 leucyl/phenylalanyl-tRNA--protein transferase compare
ABIE51_RS03755 -0.8 -2.5 ATP-dependent DNA ligase compare
ABIE51_RS07535 -0.8 -0.8 phosphate ABC transporter permease PstA compare
ABIE51_RS12600 -0.8 -0.9 cold-shock protein compare
ABIE51_RS10045 -0.8 -2.3 ferritin-like domain-containing protein compare
ABIE51_RS17270 -0.8 -1.3 DNA-directed RNA polymerase subunit omega compare
ABIE51_RS02300 -0.7 -1.9 lauroyl acyltransferase compare
ABIE51_RS06495 -0.7 -2.5 YqaA family protein compare
ABIE51_RS14165 -0.7 -1.3 tRNA-Leu compare
ABIE51_RS15415 -0.7 -0.9 DUF3301 domain-containing protein compare
ABIE51_RS12925 -0.7 -2.9 hypothetical protein compare
ABIE51_RS06210 -0.7 -3.3 hypothetical protein compare
ABIE51_RS09370 -0.7 -4.8 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABIE51_RS12960 -0.7 -1.8 DUF4136 domain-containing protein compare
ABIE51_RS10235 -0.7 -0.7 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE51_RS11120 -0.7 -2.2 ATP-binding cassette domain-containing protein compare
ABIE51_RS02735 -0.7 -1.2 gamma-glutamylcyclotransferase family protein compare
ABIE51_RS02450 -0.7 -1.6 MarR family transcriptional regulator compare
ABIE51_RS13540 -0.7 -3.2 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
ABIE51_RS11835 -0.7 -0.8 transcriptional repressor LexA compare
ABIE51_RS18040 -0.7 -1.6 MoxR family ATPase compare
ABIE51_RS14195 -0.7 -0.8 Na+/H+ antiporter NhaC family protein compare
ABIE51_RS09065 -0.7 -3.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE51_RS03805 -0.7 -2.2 fumarate/nitrate reduction transcriptional regulator Fnr compare
ABIE51_RS10420 -0.7 -1.7 HXXEE domain-containing protein compare
ABIE51_RS13205 -0.7 -1.0 hydroxymethylglutaryl-CoA lyase compare
ABIE51_RS15615 -0.7 -2.9 glucose-1-phosphate thymidylyltransferase RfbA compare
ABIE51_RS16160 -0.7 -1.9 cytochrome c compare
ABIE51_RS01695 -0.7 -0.7 50S ribosomal protein L33 compare
ABIE51_RS11855 -0.7 -1.0 hypothetical protein compare
ABIE51_RS05280 -0.7 -1.6 nucleoside triphosphate pyrophosphohydrolase compare
ABIE51_RS09905 -0.7 -2.2 ATP-binding protein compare
ABIE51_RS05575 -0.7 -0.5 helix-turn-helix transcriptional regulator compare
ABIE51_RS08885 -0.7 -0.6 cell division protein ZipA compare
ABIE51_RS16870 -0.7 -1.4 chemotaxis response regulator CheY compare
ABIE51_RS06370 -0.7 -0.9 hypothetical protein compare
ABIE51_RS07895 -0.7 -1.3 glycosyltransferase family 4 protein compare
ABIE51_RS00695 -0.7 -1.2 ABC transporter permease compare
ABIE51_RS00420 -0.7 -1.9 hypothetical protein compare
ABIE51_RS17575 -0.7 -1.1 3-isopropylmalate dehydratase large subunit compare
ABIE51_RS10870 -0.7 -1.1 N-acetylmuramoyl-L-alanine amidase compare
ABIE51_RS14050 -0.6 -2.3 cyclic pyranopterin monophosphate synthase MoaC compare
ABIE51_RS17095 -0.6 -2.7 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABIE51_RS12360 -0.6 -1.9 hypothetical protein compare
ABIE51_RS11920 -0.6 -1.7 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
ABIE51_RS07455 -0.6 -1.6 glycosyltransferase compare
ABIE51_RS06395 -0.6 -2.2 peptidylprolyl isomerase compare
ABIE51_RS06550 -0.6 -3.2 FtsH protease activity modulator HflK compare
ABIE51_RS05475 -0.6 -1.4 LysR substrate-binding domain-containing protein compare
ABIE51_RS01230 -0.6 -2.9 translocation/assembly module TamB domain-containing protein compare
ABIE51_RS17770 -0.6 -1.1 phosphoribosylamine--glycine ligase compare
ABIE51_RS05100 -0.6 -2.3 7-carboxy-7-deazaguanine synthase QueE compare
ABIE51_RS02920 -0.6 -1.9 hypothetical protein compare
ABIE51_RS04210 -0.6 -4.1 cAMP-activated global transcriptional regulator CRP compare
ABIE51_RS10345 -0.6 -1.1 type 1 glutamine amidotransferase domain-containing protein compare
ABIE51_RS01925 -0.6 -1.1 3-oxoacyl-ACP reductase FabG compare
ABIE51_RS17930 -0.6 -1.8 alpha/beta fold hydrolase compare
ABIE51_RS05995 -0.6 -0.8 peptidylprolyl isomerase compare
ABIE51_RS14345 -0.6 -2.0 aminomethyl-transferring glycine dehydrogenase compare
ABIE51_RS00700 -0.6 -0.8 ABC transporter ATP-binding protein compare
ABIE51_RS06250 -0.6 -2.3 imidazolonepropionase compare
ABIE51_RS10405 -0.6 -2.4 choice-of-anchor Q domain-containing protein compare
ABIE51_RS12335 -0.6 -1.2 CHC2 zinc finger domain-containing protein compare
ABIE51_RS06015 -0.6 -0.7 methylisocitrate lyase compare
ABIE51_RS12685 -0.6 -1.2 kynureninase compare
ABIE51_RS15530 -0.6 -1.5 YbdD/YjiX family protein compare
ABIE51_RS15785 -0.6 -1.4 FAD:protein FMN transferase compare
ABIE51_RS08425 -0.6 -1.4 RNA polymerase sigma-70 factor compare
ABIE51_RS11295 -0.6 -1.3 SDR family oxidoreductase compare
ABIE51_RS01085 -0.6 -1.5 HAD family hydrolase compare
ABIE51_RS13480 -0.6 -0.6 phytoene/squalene synthase family protein compare
ABIE51_RS06305 -0.6 -2.8 GNAT family N-acetyltransferase compare
ABIE51_RS01010 -0.6 -3.4 MlaE family lipid ABC transporter permease subunit compare
ABIE51_RS09985 -0.6 -1.2 nuclear transport factor 2 family protein compare
ABIE51_RS05540 -0.6 -0.8 hypothetical protein compare
ABIE51_RS14060 -0.6 -1.9 MBL fold metallo-hydrolase compare
ABIE51_RS01955 -0.6 -1.7 hypothetical protein compare
ABIE51_RS01225 -0.6 -2.1 GNAT family N-acetyltransferase compare
ABIE51_RS19180 -0.6 -1.3 SURF1 family protein compare
ABIE51_RS09360 -0.6 -3.7 lipopolysaccharide assembly protein LapB compare
ABIE51_RS16445 -0.6 -1.5 PepSY-associated TM helix domain-containing protein compare
ABIE51_RS11115 -0.6 -1.4 molybdate ABC transporter permease subunit compare
ABIE51_RS18100 -0.6 -1.2 dihydrofolate reductase family protein compare
ABIE51_RS07965 -0.6 -1.6 alpha/beta fold hydrolase compare
ABIE51_RS05240 -0.6 -2.1 chemotaxis protein CheB compare
ABIE51_RS19025 -0.6 -2.1 thiol:disulfide interchange protein DsbA/DsbL compare
ABIE51_RS07890 -0.6 -1.7 YdcF family protein compare
ABIE51_RS09030 -0.6 -0.7 GDSL-type esterase/lipase family protein compare
ABIE51_RS06040 -0.5 -1.5 cell wall hydrolase compare
ABIE51_RS12310 -0.5 -2.6 response regulator transcription factor compare
ABIE51_RS00590 -0.5 -1.6 hypothetical protein compare
ABIE51_RS16735 -0.5 -1.2 flagellar export chaperone FliS compare
ABIE51_RS11615 -0.5 -2.2 carbamoyl-phosphate synthase large subunit compare
ABIE51_RS01565 -0.5 -0.7 hypothetical protein compare
ABIE51_RS13065 -0.5 -0.6 hypothetical protein compare
ABIE51_RS00990 -0.5 -3.1 VacJ family lipoprotein compare
ABIE51_RS10215 -0.5 -1.6 gluconokinase, GntK/IdnK-type compare
ABIE51_RS10820 -0.5 -1.2 PAS domain-containing sensor histidine kinase compare
ABIE51_RS04065 -0.5 -2.7 oligopeptide:H+ symporter compare
ABIE51_RS04105 -0.5 -0.9 hypothetical protein compare
ABIE51_RS03295 -0.5 -0.8 hypothetical protein compare
ABIE51_RS06630 -0.5 -1.4 ROK family protein compare
ABIE51_RS16080 -0.5 -1.0 aminoglycoside 6'-N-acetyltransferase compare
ABIE51_RS12180 -0.5 -2.2 patatin-like phospholipase family protein compare
ABIE51_RS18280 -0.5 -1.9 hypothetical protein compare
ABIE51_RS08725 -0.5 -0.9 heme ABC exporter ATP-binding protein CcmA compare
ABIE51_RS11955 -0.5 -2.3 DNA starvation/stationary phase protection protein compare
ABIE51_RS15635 -0.5 -2.2 hypothetical protein compare
ABIE51_RS10065 -0.5 -1.2 hypothetical protein compare
ABIE51_RS16175 -0.5 -1.6 alpha/beta hydrolase compare
ABIE51_RS13415 -0.5 -1.9 hypothetical protein compare
ABIE51_RS10930 -0.5 -0.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
ABIE51_RS08040 -0.5 -2.6 glucose-6-phosphate isomerase compare
ABIE51_RS10090 -0.5 -2.3 efflux RND transporter permease subunit compare
ABIE51_RS14245 -0.5 -3.0 glucan biosynthesis protein G compare
ABIE51_RS03830 -0.5 -2.1 4Fe-4S dicluster domain-containing protein compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in carbon source experiments

For carbon source D-Glucuronic Acid across organisms