Experiment set1IT014 for Lysobacter sp. OAE881

Compare to:

D-Glucuronic Acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABIE51_RS07145 +1.8 2.1 helix-turn-helix transcriptional regulator compare
ABIE51_RS16485 +1.8 2.9 adenosylhomocysteinase compare
ABIE51_RS07100 +1.7 5.0 hypothetical protein compare
ABIE51_RS13685 +1.6 3.3 transglutaminase domain-containing protein compare
ABIE51_RS07110 +1.5 2.7 hypothetical protein compare
ABIE51_RS16370 +1.4 1.7 hypothetical protein compare
ABIE51_RS07190 +1.4 3.4 SANT/Myb-like DNA-binding domain-containing protein compare
ABIE51_RS05555 +1.4 2.1 NAD(P) transhydrogenase subunit alpha compare
ABIE51_RS07085 +1.4 6.0 hypothetical protein compare
ABIE51_RS07130 +1.3 4.4 hypothetical protein compare
ABIE51_RS07875 +1.3 1.9 alpha/beta hydrolase compare
ABIE51_RS07090 +1.2 6.7 recombination protein NinB compare
ABIE51_RS07260 +1.2 3.9 hypothetical protein compare
ABIE51_RS10885 +1.2 2.4 MarC family NAAT transporter compare
ABIE51_RS07080 +1.2 5.4 YqaJ viral recombinase family protein compare
ABIE51_RS07180 +1.2 5.6 DNA cytosine methyltransferase compare
ABIE51_RS16215 +1.1 1.5 DUF1294 domain-containing protein compare
ABIE51_RS07200 +1.1 3.3 hypothetical protein compare
ABIE51_RS04345 +1.1 8.3 glycosyltransferase family A protein compare
ABIE51_RS10430 +1.1 1.5 hypothetical protein compare
ABIE51_RS14090 +1.1 4.6 PP2C family serine/threonine-protein phosphatase compare
ABIE51_RS07050 +1.1 3.4 hypothetical protein compare
ABIE51_RS07370 +1.1 8.4 methyltransferase domain-containing protein compare
ABIE51_RS14390 +1.0 2.1 response regulator compare
ABIE51_RS07270 +1.0 5.3 hypothetical protein compare
ABIE51_RS04330 +1.0 7.5 methyltransferase domain-containing protein compare
ABIE51_RS11005 +1.0 1.6 AraC family transcriptional regulator compare
ABIE51_RS04350 +1.0 7.9 glycosyltransferase family 2 protein compare
ABIE51_RS04495 +1.0 4.3 site-specific tyrosine recombinase XerD compare
ABIE51_RS07170 +0.9 1.3 hypothetical protein compare
ABIE51_RS07165 +0.9 4.4 DnaB-like helicase C-terminal domain-containing protein compare
ABIE51_RS08780 +0.9 3.9 SMC-Scp complex subunit ScpB compare
ABIE51_RS07075 +0.9 4.8 single-stranded DNA-binding protein compare
ABIE51_RS07185 +0.9 4.7 DUF968 domain-containing protein compare
ABIE51_RS05045 +0.9 1.1 Holliday junction branch migration protein RuvA compare
ABIE51_RS07205 +0.9 3.4 hypothetical protein compare
ABIE51_RS13285 +0.9 1.3 YdeI/OmpD-associated family protein compare
ABIE51_RS11525 +0.9 2.4 type II toxin-antitoxin system VapC family toxin compare
ABIE51_RS07235 +0.9 3.4 tRNA-Ser compare
ABIE51_RS04355 +0.9 4.3 NAD(P)-dependent oxidoreductase compare
ABIE51_RS07210 +0.9 2.7 hypothetical protein compare
ABIE51_RS07175 +0.9 3.8 HNH endonuclease signature motif containing protein compare
ABIE51_RS07255 +0.9 3.6 serine protease compare
ABIE51_RS07070 +0.9 5.1 hypothetical protein compare
ABIE51_RS00490 +0.8 1.1 protein-export chaperone SecB compare
ABIE51_RS06755 +0.8 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
ABIE51_RS09245 +0.8 1.9 KTSC domain-containing protein compare
ABIE51_RS09815 +0.8 2.1 YaeQ family protein compare
ABIE51_RS10240 +0.8 1.2 hemerythrin domain-containing protein compare
ABIE51_RS07155 +0.8 2.9 hypothetical protein compare
ABIE51_RS02055 +0.8 2.4 ankyrin repeat domain-containing protein compare
ABIE51_RS07195 +0.8 3.3 hypothetical protein compare
ABIE51_RS06460 +0.8 1.2 hypothetical protein compare
ABIE51_RS05310 +0.8 1.1 ABC transporter ATP-binding protein compare
ABIE51_RS13050 +0.8 0.9 hypothetical protein compare
ABIE51_RS07160 +0.7 4.1 hypothetical protein compare
ABIE51_RS12365 +0.7 3.0 hypothetical protein compare
ABIE51_RS13060 +0.7 1.3 hypothetical protein compare
ABIE51_RS04335 +0.7 5.4 hypothetical protein compare
ABIE51_RS13370 +0.7 1.1 glutamate 5-kinase compare
ABIE51_RS07250 +0.7 3.0 hypothetical protein compare
ABIE51_RS16025 +0.7 2.0 YqgE/AlgH family protein compare
ABIE51_RS10490 +0.7 2.6 serine/threonine protein phosphatase compare
ABIE51_RS13970 +0.7 1.2 hypothetical protein compare
ABIE51_RS07065 +0.7 3.2 DUF551 domain-containing protein compare
ABIE51_RS03815 +0.7 0.9 cbb3-type cytochrome oxidase assembly protein CcoS compare
ABIE51_RS09970 +0.7 2.6 YciI family protein compare
ABIE51_RS04190 +0.7 1.6 indole-3-glycerol phosphate synthase TrpC compare
ABIE51_RS06980 +0.7 0.6 [protein-PII] uridylyltransferase compare
ABIE51_RS07350 +0.7 3.5 hypothetical protein compare
ABIE51_RS10015 +0.7 1.8 potassium-transporting ATPase subunit KdpB compare
ABIE51_RS10530 +0.7 3.4 dihydrodipicolinate synthase family protein compare
ABIE51_RS17555 +0.7 1.2 ACT domain-containing protein compare
ABIE51_RS10795 +0.7 1.9 cytochrome C oxidase subunit III compare
ABIE51_RS02700 +0.7 2.3 hypothetical protein compare
ABIE51_RS04970 +0.7 1.4 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE51_RS15410 +0.7 0.6 FHA domain-containing protein compare
ABIE51_RS15965 +0.7 1.2 PTS sugar transporter subunit IIA compare
ABIE51_RS16910 +0.6 1.4 response regulator compare
ABIE51_RS03620 +0.6 1.2 hypothetical protein compare
ABIE51_RS12870 +0.6 1.9 mechanosensitive ion channel family protein compare
ABIE51_RS07035 +0.6 4.7 hypothetical protein compare
ABIE51_RS05030 +0.6 1.4 alpha/beta hydrolase compare
ABIE51_RS10855 +0.6 2.3 DNA/RNA non-specific endonuclease compare
ABIE51_RS07320 +0.6 2.4 packaged DNA stabilization gp4 family protein compare
ABIE51_RS01800 +0.6 2.8 DUF4350 domain-containing protein compare
ABIE51_RS05220 +0.6 2.1 response regulator compare
ABIE51_RS15490 +0.6 2.3 TetR/AcrR family transcriptional regulator compare
ABIE51_RS07295 +0.6 3.8 hypothetical protein compare
ABIE51_RS08155 +0.6 2.3 dienelactone hydrolase family protein compare
ABIE51_RS08935 +0.6 2.2 penicillin-binding protein 1C compare
ABIE51_RS17445 +0.6 2.3 LON peptidase substrate-binding domain-containing protein compare
ABIE51_RS16680 +0.6 3.5 flagellar hook capping FlgD N-terminal domain-containing protein compare
ABIE51_RS11755 +0.6 1.5 DUF4142 domain-containing protein compare
ABIE51_RS11395 +0.6 1.0 DksA/TraR family C4-type zinc finger protein compare
ABIE51_RS01185 +0.6 1.5 V4R domain-containing protein compare
ABIE51_RS15565 +0.6 1.2 hypothetical protein compare
ABIE51_RS05350 +0.6 2.2 TPM domain-containing protein compare
ABIE51_RS15030 +0.6 2.0 Lrp/AsnC family transcriptional regulator compare
ABIE51_RS05485 +0.6 2.2 alkyl hydroperoxide reductase subunit C compare
ABIE51_RS09670 +0.6 1.9 MFS transporter compare
ABIE51_RS03030 +0.6 1.8 DUF484 family protein compare
ABIE51_RS11530 +0.6 1.3 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
ABIE51_RS16565 +0.6 2.1 hypothetical protein compare
ABIE51_RS10505 +0.6 1.1 MFS transporter compare
ABIE51_RS02785 +0.5 0.7 DUF2946 family protein compare
ABIE51_RS12170 +0.5 1.8 polyhydroxyalkanoic acid system family protein compare
ABIE51_RS02370 +0.5 3.0 hypothetical protein compare
ABIE51_RS14650 +0.5 1.1 VOC family protein compare
ABIE51_RS05285 +0.5 1.8 DUF962 domain-containing protein compare
ABIE51_RS07300 +0.5 3.7 portal protein compare
ABIE51_RS09040 +0.5 1.9 ABC transporter ATP-binding protein compare
ABIE51_RS07040 +0.5 2.4 hypothetical protein compare
ABIE51_RS18755 +0.5 1.9 hypothetical protein compare
ABIE51_RS07230 +0.5 3.2 hypothetical protein compare
ABIE51_RS10770 +0.5 0.9 OBAP family protein compare
ABIE51_RS08840 +0.5 1.2 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS12110 +0.5 1.0 LysR family transcriptional regulator compare
ABIE51_RS07315 +0.5 2.3 P22 phage major capsid protein family protein compare
ABIE51_RS07245 +0.5 2.3 lysozyme compare
ABIE51_RS18145 +0.5 1.9 response regulator compare
ABIE51_RS10755 +0.5 1.2 DUF2269 domain-containing protein compare
ABIE51_RS12590 +0.5 1.4 cytochrome c compare
ABIE51_RS10415 +0.5 2.5 alpha/beta fold hydrolase compare
ABIE51_RS11735 +0.5 1.2 AarF/UbiB family protein compare
ABIE51_RS15770 +0.5 1.3 PepSY-associated TM helix domain-containing protein compare
ABIE51_RS14475 +0.5 2.6 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL compare
ABIE51_RS17860 +0.5 2.1 hypothetical protein compare
ABIE51_RS08970 +0.5 1.5 TIGR00730 family Rossman fold protein compare
ABIE51_RS16455 +0.5 1.5 class I SAM-dependent methyltransferase compare
ABIE51_RS13270 +0.5 1.8 methylthioribulose 1-phosphate dehydratase compare
ABIE51_RS03730 +0.5 1.2 hypothetical protein compare
ABIE51_RS07910 +0.5 0.8 polysaccharide deacetylase family protein compare
ABIE51_RS00105 +0.5 1.1 SPOR domain-containing protein compare
ABIE51_RS14930 +0.5 1.5 ATP-dependent RNA helicase DbpA compare
ABIE51_RS12205 +0.5 1.9 STAS/SEC14 domain-containing protein compare
ABIE51_RS04460 +0.5 1.6 hypothetical protein compare
ABIE51_RS03035 +0.5 1.4 tyrosine recombinase XerC compare
ABIE51_RS06290 +0.5 2.3 TetR/AcrR family transcriptional regulator compare
ABIE51_RS10945 +0.5 1.4 SMP-30/gluconolactonase/LRE family protein compare
ABIE51_RS14690 +0.5 0.7 hypothetical protein compare
ABIE51_RS17280 +0.5 1.9 YicC/YloC family endoribonuclease compare
ABIE51_RS07060 +0.5 1.1 hypothetical protein compare
ABIE51_RS04635 +0.5 2.0 class I SAM-dependent methyltransferase compare
ABIE51_RS01915 +0.5 1.6 MMPL family transporter compare
ABIE51_RS10195 +0.5 0.8 anti-sigma regulatory factor compare
ABIE51_RS16320 +0.5 1.7 TetR/AcrR family transcriptional regulator compare
ABIE51_RS08010 +0.5 1.2 tRNA-Glu compare
ABIE51_RS07225 +0.5 1.6 hypothetical protein compare
ABIE51_RS07410 +0.5 1.6 polysaccharide pyruvyl transferase family protein compare
ABIE51_RS11655 +0.5 1.0 DNA repair protein RecN compare
ABIE51_RS08015 +0.5 1.7 polynucleotide adenylyltransferase PcnB compare
ABIE51_RS05125 +0.5 2.1 hypothetical protein compare
ABIE51_RS05375 +0.5 1.7 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABIE51_RS16010 +0.4 1.1 prolyl oligopeptidase family serine peptidase compare
ABIE51_RS11985 +0.4 1.6 alpha/beta hydrolase compare
ABIE51_RS14280 +0.4 1.3 two-component system response regulator CreB compare
ABIE51_RS12635 +0.4 1.2 hypothetical protein compare
ABIE51_RS00900 +0.4 1.0 fluoride efflux transporter CrcB compare
ABIE51_RS17925 +0.4 1.1 DUF3182 family protein compare
ABIE51_RS07305 +0.4 1.2 hypothetical protein compare
ABIE51_RS10805 +0.4 1.0 PQQ-dependent catabolism-associated beta-propeller protein compare
ABIE51_RS07990 +0.4 1.3 glycine cleavage system protein R compare
ABIE51_RS04670 +0.4 1.2 FAD-linked oxidase C-terminal domain-containing protein compare
ABIE51_RS11080 +0.4 1.3 LysR family transcriptional regulator compare
ABIE51_RS13245 +0.4 1.0 phosphoglycerate dehydrogenase compare
ABIE51_RS10000 +0.4 1.9 response regulator transcription factor compare
ABIE51_RS12785 +0.4 1.2 Ku protein compare
ABIE51_RS06540 +0.4 0.7 RNA chaperone Hfq compare
ABIE51_RS18810 +0.4 1.9 hypothetical protein compare
ABIE51_RS11280 +0.4 0.8 hypothetical protein compare
ABIE51_RS07395 +0.4 1.9 glycosyltransferase family 9 protein compare
ABIE51_RS13595 +0.4 2.5 hypothetical protein compare
ABIE51_RS16725 +0.4 1.1 flagellin compare
ABIE51_RS16220 +0.4 1.9 aspartyl/asparaginyl beta-hydroxylase domain-containing protein compare
ABIE51_RS05260 +0.4 1.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
ABIE51_RS11070 +0.4 1.2 bestrophin family ion channel compare
ABIE51_RS08225 +0.4 1.9 D-glycerate dehydrogenase compare
ABIE51_RS08770 +0.4 1.4 spore coat U domain-containing protein compare
ABIE51_RS10875 +0.4 1.3 M23 family metallopeptidase compare
ABIE51_RS06170 +0.4 0.6 SPOR domain-containing protein compare
ABIE51_RS16855 +0.4 1.6 AAA family ATPase compare
ABIE51_RS03085 +0.4 2.0 HlyD family secretion protein compare
ABIE51_RS13785 +0.4 0.9 ABC transporter transmembrane domain-containing protein compare
ABIE51_RS05245 +0.4 1.0 chemotaxis protein CheW compare
ABIE51_RS03750 +0.4 1.5 ligase-associated DNA damage response exonuclease compare
ABIE51_RS07135 +0.4 0.6 YdaS family helix-turn-helix protein compare
ABIE51_RS13525 +0.4 1.4 acetoacetyl-CoA reductase compare
ABIE51_RS09700 +0.4 1.3 calcium/proton exchanger compare
ABIE51_RS16340 +0.4 2.1 MFS transporter compare
ABIE51_RS01440 +0.4 0.6 P-II family nitrogen regulator compare
ABIE51_RS02335 +0.4 1.0 carbohydrate kinase compare
ABIE51_RS18520 +0.4 0.6 hypothetical protein compare
ABIE51_RS07285 +0.4 0.6 hypothetical protein compare
ABIE51_RS16050 +0.4 1.2 PilT/PilU family type 4a pilus ATPase compare
ABIE51_RS02865 +0.4 0.9 rhamnogalacturonan acetylesterase compare
ABIE51_RS07215 +0.4 2.1 metallophosphoesterase compare
ABIE51_RS01825 +0.4 1.8 SDR family oxidoreductase compare
ABIE51_RS10960 +0.4 1.3 tetratricopeptide repeat protein compare
ABIE51_RS13075 +0.4 2.0 DUF6402 family protein compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in carbon source experiments

For carbon source D-Glucuronic Acid across organisms