Experiment set1IT011 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Acriflavine 7.75 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1404 -4.7 -7.1 Ferritin and Dps compare
Psyr_2282 -4.0 -11.0 Hydrophobe/amphiphile efflux-1 HAE1 conserved
Psyr_3620 -3.9 -2.6 hypothetical protein compare
Psyr_2283 -3.6 -5.9 Secretion protein HlyD conserved
Psyr_4009 -3.5 -9.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1613 -3.4 -4.0 septum site-determining protein MinC compare
Psyr_4887 -3.3 -12.1 Peptidase S41A, C-terminal protease compare
Psyr_0951 -3.2 -3.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0215 -3.1 -12.8 Exodeoxyribonuclease III xth compare
Psyr_4203 -3.1 -2.1 SsrA-binding protein compare
Psyr_1544 -3.0 -4.9 SirA-like protein compare
Psyr_4341 -3.0 -8.1 thiamine-phosphate diphosphorylase compare
Psyr_4340 -2.7 -8.6 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -2.7 -7.2 thiazole-phosphate synthase compare
Psyr_1953 -2.7 -2.1 conserved hypothetical protein compare
Psyr_0202 -2.7 -10.9 transcriptional regulator, LysR family compare
Psyr_0293 -2.6 -12.6 Polyphosphate kinase compare
Psyr_3008 -2.4 -5.6 Undecaprenyl-diphosphatase compare
Psyr_0575 -2.3 -4.6 protease FtsH subunit HflC compare
Psyr_4008 -2.3 -15.3 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_0201 -2.2 -7.2 ATP-dependent DNA helicase RecG compare
Psyr_4687 -2.1 -6.3 biotin synthase compare
Psyr_1378 -2.1 -2.4 RecA protein compare
Psyr_0849 -2.1 -10.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0014 -2.1 -4.4 lipid A biosynthesis acyltransferase compare
Psyr_4091 -2.0 -4.0 8-oxo-dGTPase compare
Psyr_1268 -2.0 -7.0 extracellular solute-binding protein, family 3:SLT compare
Psyr_1410 -1.9 -4.8 Holliday junction DNA helicase RuvB compare
Psyr_4686 -1.9 -5.4 8-amino-7-oxononanoate synthase compare
Psyr_4940 -1.8 -2.7 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_0947 -1.8 -6.6 TPR repeat protein:TPR repeat protein compare
Psyr_0454 -1.8 -4.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0574 -1.7 -4.9 protease FtsH subunit HflK compare
Psyr_3675 -1.7 -2.9 adenosylcobinamide kinase compare
Psyr_4991 -1.7 -2.6 hypothetical protein compare
Psyr_4581 -1.7 -3.1 anthranilate synthase, component II compare
Psyr_4684 -1.7 -2.8 biotin synthesis protein BioC compare
Psyr_1614 -1.6 -3.2 lipid A biosynthesis acyltransferase compare
Psyr_4683 -1.6 -3.7 dethiobiotin synthase compare
Psyr_1408 -1.5 -2.3 Holliday junction endonuclease RuvC compare
Psyr_1373 -1.5 -2.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3179 -1.5 -2.7 DNA translocase FtsK compare
Psyr_2855 -1.4 -4.5 methionine synthase (B12-independent) compare
Psyr_0228 -1.4 -4.0 Major facilitator superfamily compare
Psyr_0541 -1.4 -2.8 Small multidrug resistance protein compare
Psyr_0917 -1.4 -7.1 ABC-2 compare
Psyr_3954 -1.4 -4.3 GTP-binding protein LepA compare
Psyr_1751 -1.4 -4.1 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2118 -1.3 -3.2 protein of unknown function DUF883 compare
Psyr_1670 -1.3 -2.5 Short-chain dehydrogenase/reductase SDR compare
Psyr_1530 -1.3 -3.1 hypothetical protein compare
Psyr_1749 -1.3 -5.0 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_3698 -1.3 -3.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0270 -1.3 -2.9 DNA polymerase I compare
Psyr_0044 -1.2 -2.0 transferase hexapeptide repeat protein compare
Psyr_0255 -1.2 -1.7 glutamate-cysteine ligase compare
Psyr_4407 -1.2 -2.5 phosphoribosylamine--glycine ligase compare
Psyr_4112 -1.2 -6.5 Protein of unknown function UPF0011 compare
Psyr_0918 -1.2 -7.5 ABC transporter compare
Psyr_4007 -1.2 -5.9 Secretion protein HlyD compare
Psyr_4208 -1.2 -6.1 heme catalase/peroxidase compare
Psyr_0535 -1.2 -2.5 toluene tolerance protein, putative compare
Psyr_1022 -1.2 -1.8 conserved hypothetical protein compare
Psyr_3673 -1.2 -1.1 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_1372 -1.1 -3.0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_4658 -1.1 -2.8 CDS compare
Psyr_3739 -1.1 -1.9 conserved hypothetical protein compare
Psyr_3262 -1.1 -2.0 dnaK suppressor protein, putative compare
Psyr_3323 -1.1 -2.7 conserved hypothetical protein compare
Psyr_1895 -1.1 -2.0 conserved hypothetical protein compare
Psyr_1371 -1.1 -4.8 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0524 -1.1 -2.9 Lipopolysaccharide kinase compare
Psyr_2461 -1.1 -2.9 Uncharacterized conserved protein UCP030820 compare
Psyr_3193 -1.0 -1.3 Transcription factor jumonji, jmjC compare
Psyr_0579 -1.0 -7.0 RNAse R compare
Psyr_1780 -1.0 -1.4 transcriptional regulator, TetR family compare
Psyr_3005 -1.0 -1.9 3-oxoadipate enol-lactonase compare
Psyr_4115 -1.0 -1.8 phosphoheptose isomerase compare
Psyr_3028 -1.0 -2.0 Protein of unknown function DUF28 compare
Psyr_0318 -1.0 -3.5 cell division protein ZapA compare
Psyr_0231 -1.0 -2.4 conserved hypothetical protein compare
Psyr_2921 -1.0 -2.1 ADP-ribosylglycohydrolase compare
Psyr_4884 -1.0 -3.4 Rhodanese-like protein compare
Psyr_3896 -1.0 -1.8 BFD-like [2Fe-2S]-binding region compare
Psyr_1981 -1.0 -5.0 PAS:GGDEF compare
Psyr_1907 -0.9 -2.1 GTP cyclohydrolase I compare
Psyr_4264 -0.9 -5.4 ABC transporter compare
Psyr_3680 -0.9 -2.7 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_4978 -0.9 -2.5 hypothetical protein compare
Psyr_1931 -0.9 -3.1 hypothetical protein compare
Psyr_4015 -0.9 -1.8 conserved domain protein compare
Psyr_2854 -0.9 -3.2 conserved hypothetical protein compare
Psyr_4158 -0.9 -4.9 conserved hypothetical protein compare
Psyr_4116 -0.9 -1.8 Transport-associated protein compare
Psyr_4118 -0.9 -4.3 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_3120 -0.9 -2.1 D-glucarate dehydratase compare
Psyr_3627 -0.9 -1.9 OsmC-like protein compare
Psyr_4627 -0.9 -1.5 dimethyladenosine transferase compare
Psyr_2984 -0.9 -2.0 conserved hypothetical protein compare
Psyr_2112 -0.9 -1.7 Protein with unknown function DUF469 compare
Psyr_4178 -0.9 -3.7 tRNA pseudouridine synthase B compare
Psyr_1966 -0.9 -1.9 Peptidase M19, renal dipeptidase compare
Psyr_3660 -0.9 -3.0 conserved hypothetical protein compare
Psyr_0268 -0.9 -1.7 DSBA oxidoreductase compare
Psyr_1418 -0.9 -2.2 Radical SAM compare
Psyr_2448 -0.9 -3.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_1250 -0.9 -1.8 conserved hypothetical protein compare
Psyr_4989 -0.8 -2.2 hypothetical protein compare
Psyr_0033 -0.8 -2.5 tryptophan synthase, alpha chain compare
Psyr_1975 -0.8 -2.3 Integrase, catalytic region compare
Psyr_4562 -0.8 -2.7 conserved domain protein compare
Psyr_0017 -0.8 -3.4 16S rRNA m(5)C-967 methyltransferase compare
Psyr_1121 -0.8 -1.2 6-phosphogluconolactonase compare
Psyr_0315 -0.8 -2.9 Protein of unknown function DUF589 compare
Psyr_2779 -0.8 -1.7 Phage minor tail compare
Psyr_1956 -0.8 -2.8 pyoverdine biosynthesis regulatory gene, putative compare
Psyr_2860 -0.8 -1.8 hypothetical protein compare
Psyr_2487 -0.8 -2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_2588 -0.8 -1.4 HpcH/HpaI aldolase compare
Psyr_4300 -0.8 -2.2 DNA polymerase III, epsilon subunit compare
Psyr_1599 -0.8 -5.6 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A compare
Psyr_3681 -0.8 -0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_1949 -0.8 -2.2 ABC-3 compare
Psyr_4167 -0.8 -2.1 Rare lipoprotein A compare
Psyr_3696 -0.8 -2.4 23S rRNA m(5)U-1939 methyltransferase compare
Psyr_2226 -0.8 -2.6 formyltetrahydrofolate deformylase compare
Psyr_3674 -0.8 -1.6 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_3282 -0.8 -2.9 transcriptional regulator, TetR family compare
Psyr_0553 -0.8 -4.2 conserved hypothetical protein compare
Psyr_5065 -0.8 -4.4 ATP-dependent DNA helicase UvrD compare
Psyr_2897 -0.8 -3.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3900 -0.8 -1.7 conserved hypothetical protein compare
Psyr_2970 -0.8 -2.4 TPR repeat protein:TPR repeat protein compare
Psyr_4381 -0.8 -5.8 arginine decarboxylase compare
Psyr_0525 -0.8 -3.4 Lipopolysaccharide kinase compare
Psyr_3952 -0.8 -1.6 conserved hypothetical protein compare
Psyr_4564 -0.8 -3.6 Biotin--acetyl-CoA-carboxylase ligase compare
Psyr_0304 -0.8 -2.3 ChaC-like protein compare
Psyr_3213 -0.8 -1.5 Propeptide, PepSY amd peptidase M4 compare
Psyr_4491 -0.7 -1.4 Deoxyribose-phosphate aldolase compare
Psyr_1962 -0.7 -4.1 TonB-dependent siderophore receptor compare
Psyr_5132 -0.7 -1.7 Glucose-inhibited division protein A subfamily compare
Psyr_1650 -0.7 -1.6 aminodeoxychorismate lyase apoprotein compare
Psyr_3667 -0.7 -1.6 conserved hypothetical protein compare
Psyr_0349 -0.7 -1.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1791 -0.7 -1.4 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_4019 -0.7 -2.3 H-NS family protein MvaT compare
Psyr_0259 -0.7 -1.5 Osmolarity sensor protein envZ compare
Psyr_1978 -0.7 -3.0 Thioesterase superfamily compare
Psyr_1989 -0.7 -2.2 galactonate dehydratase compare
Psyr_1691 -0.7 -3.2 hypothetical protein compare
Psyr_4316 -0.7 -2.4 conserved hypothetical protein compare
Psyr_1123 -0.7 -2.1 conserved hypothetical protein compare
Psyr_1955 -0.7 -1.6 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_1935 -0.7 -2.8 Protein of unknown function DUF796 compare
Psyr_4224 -0.7 -1.4 conserved hypothetical protein compare
Psyr_2249 -0.7 -2.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1120 -0.7 -3.7 glucose-6-phosphate 1-dehydrogenase compare
Psyr_1916 -0.7 -2.4 Peptidase S24, S26A and S26B compare
Psyr_4716 -0.7 -2.3 Sarcosine oxidase, gamma subunit, heterotetrameric compare
Psyr_4194 -0.7 -2.4 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3630 -0.7 -2.4 conserved hypothetical protein compare
Psyr_2356 -0.7 -2.1 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_2414 -0.7 -2.0 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 compare
Psyr_0034 -0.7 -2.5 tryptophan synthase, beta chain compare
Psyr_1988 -0.7 -1.4 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_1419 -0.7 -1.4 preQ(0) biosynthesis protein QueC compare
Psyr_3142 -0.7 -1.5 general secretion pathway protein N, putative compare
Psyr_4114 -0.7 -2.8 Protein of unknown function UPF0102 compare
Psyr_0319 -0.7 -3.6 conserved hypothetical protein compare
Psyr_0941 -0.7 -2.8 Conserved hypothetical protein 92 compare
Psyr_2067 -0.7 -1.3 ABC transporter compare
Psyr_4228 -0.7 -4.0 transcriptional regulator, GntR family compare
Psyr_2664 -0.7 -3.4 hypothetical protein compare
Psyr_4093 -0.7 -2.4 glutamate N-acetyltransferase compare
Psyr_2346 -0.7 -2.7 conserved hypothetical protein compare
Psyr_0511 -0.7 -2.1 conserved hypothetical protein compare
Psyr_4845 -0.7 -1.6 conserved hypothetical protein compare
Psyr_0235 -0.7 -3.2 D-amino acid dehydrogenase small subunit compare
Psyr_1434 -0.7 -2.3 Antibiotic biosynthesis monooxygenase compare
Psyr_4696 -0.7 -3.0 transcriptional regulator, LacI family compare
Psyr_1556 -0.7 -1.1 hypothetical protein compare
Psyr_3913 -0.7 -2.4 Helix-turn-helix, Fis-type compare
Psyr_2456 -0.7 -1.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_2347 -0.7 -1.0 hypothetical protein compare
Psyr_3644 -0.7 -1.2 prephenate dehydrogenase compare
Psyr_4610 -0.7 -2.4 phosphoglycolate phosphatase compare
Psyr_4932 -0.7 -3.8 agmatine deiminase compare
Psyr_2266 -0.7 -1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1543 -0.7 -3.4 Peptidase M48, Ste24p compare
Psyr_0179 -0.7 -1.9 Protein of unknown function DUF1289 compare
Psyr_4460 -0.6 -1.3 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0550 -0.6 -1.5 Protein of unknown function UPF0227 compare
Psyr_0234 -0.6 -3.8 transcriptional regulator, AsnC family compare
Psyr_3932 -0.6 -1.2 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4450 -0.6 -2.8 transcriptional regulator, TetR family compare
Psyr_2991 -0.6 -2.6 GCN5-related N-acetyltransferase compare
Psyr_3482 -0.6 -2.7 Protein of unknown function DUF1348 compare
Psyr_2080 -0.6 -2.3 aminodeoxychorismate synthase, subunit I compare
Psyr_5129 -0.6 -2.0 chromosome segregation DNA-binding protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Acriflavine in Pseudomonas syringae pv. syringae B728a

For stress Acriflavine across organisms