Experiment set1IT011 for Burkholderia phytofirmans PsJN

Compare to:

Sodium D,L-Lactate carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS05905 +1.1 1.3 hypothetical protein compare
BPHYT_RS09480 +1.1 2.0 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS35310 +1.0 1.6 GCN5 family N-acetyltransferase compare
BPHYT_RS32210 +1.0 1.2 hypothetical protein compare
BPHYT_RS21495 +1.0 1.7 ABC transporter compare
BPHYT_RS20880 +1.0 1.5 polyketide cyclase compare
BPHYT_RS01795 +0.9 6.2 histidine kinase compare
BPHYT_RS13320 +0.9 1.5 allantoate amidohydrolase compare
BPHYT_RS18835 +0.9 1.5 flagellar biosynthesis protein FliR compare
BPHYT_RS09565 +0.9 2.0 acetyl-CoA acetyltransferase compare
BPHYT_RS32240 +0.9 1.8 chromosome replication initiation inhibitor protein compare
BPHYT_RS30485 +0.8 1.2 ABC transporter ATP-binding protein compare
BPHYT_RS08135 +0.8 1.4 hypothetical protein compare
BPHYT_RS02760 +0.8 3.5 cytochrome BD oxidase subunit II compare
BPHYT_RS23030 +0.8 1.6 gluconate 2-dehydrogenase compare
BPHYT_RS03875 +0.8 1.8 dehydrogenase compare
BPHYT_RS07080 +0.8 1.7 glutathione S-transferase compare
BPHYT_RS29920 +0.8 1.1 hypothetical protein compare
BPHYT_RS20025 +0.8 1.8 crotonase compare
BPHYT_RS10040 +0.8 1.1 hypothetical protein compare
BPHYT_RS03090 +0.8 1.5 hypothetical protein compare
BPHYT_RS35245 +0.7 2.0 hypothetical protein compare
BPHYT_RS26355 +0.7 1.2 hypothetical protein compare
BPHYT_RS01790 +0.7 6.3 LuxR family transcriptional regulator compare
BPHYT_RS21790 +0.7 1.6 hypothetical protein compare
BPHYT_RS30055 +0.7 2.7 hypothetical protein compare
BPHYT_RS34920 +0.7 2.2 IclR family transcriptional regulator compare
BPHYT_RS20725 +0.7 1.3 histidine kinase compare
BPHYT_RS18825 +0.7 2.5 flagellar biosynthesis protein FliP compare
BPHYT_RS10945 +0.7 1.6 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS30085 +0.7 1.4 hypothetical protein compare
BPHYT_RS00115 +0.7 1.9 acetaldehyde dehydrogenase compare
BPHYT_RS26050 +0.7 1.3 ABC transporter permease compare
BPHYT_RS32870 +0.7 2.8 hypothetical protein compare
BPHYT_RS27295 +0.7 1.2 hypothetical protein compare
BPHYT_RS21910 +0.7 2.6 ABC transporter permease compare
BPHYT_RS02800 +0.7 3.2 5-carboxymethyl-2-hydroxymuconate isomerase compare
BPHYT_RS33170 +0.7 2.7 acetyltransferase compare
BPHYT_RS03015 +0.7 0.9 aldolase compare
BPHYT_RS21215 +0.7 3.6 Crp/Fnr family transcriptional regulator compare
BPHYT_RS05395 +0.7 1.2 hypothetical protein compare
BPHYT_RS02770 +0.7 3.5 membrane protein compare
BPHYT_RS16195 +0.7 2.5 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS06260 +0.7 3.4 MFS transporter compare
BPHYT_RS03830 +0.6 1.6 hypothetical protein compare
BPHYT_RS28930 +0.6 1.0 chromosome partitioning protein ParA compare
BPHYT_RS01620 +0.6 4.8 sensor histidine kinase compare
BPHYT_RS18895 +0.6 3.6 flagellar basal body rod protein FlgB compare
BPHYT_RS02755 +0.6 1.6 cyd operon protein YbgT compare
BPHYT_RS04985 +0.6 2.1 hypothetical protein compare
BPHYT_RS28595 +0.6 1.2 glyoxalase compare
BPHYT_RS14250 +0.6 3.9 glycosyl transferase compare
BPHYT_RS18860 +0.6 2.7 flagellar P-ring protein FlgI compare
BPHYT_RS04045 +0.6 2.6 acyltransferase compare
BPHYT_RS35530 +0.6 2.0 arsenate reductase compare
BPHYT_RS13265 +0.6 1.2 hypothetical protein compare
BPHYT_RS23445 +0.6 1.6 hexuronate transporter compare
BPHYT_RS00955 +0.6 2.3 DNA polymerase compare
BPHYT_RS11970 +0.6 1.1 cupin compare
BPHYT_RS12230 +0.6 1.1 hypothetical protein compare
BPHYT_RS26285 +0.6 2.5 glycogen debranching protein compare
BPHYT_RS27155 +0.6 1.4 peroxiredoxin compare
BPHYT_RS13760 +0.6 2.0 hypothetical protein compare
BPHYT_RS35100 +0.6 2.1 ABC transporter substrate-binding protein compare
BPHYT_RS25885 +0.6 1.9 type III secretion protein compare
BPHYT_RS13470 +0.6 0.9 arylsulfate sulfotransferase compare
BPHYT_RS17830 +0.6 1.0 histidine kinase compare
BPHYT_RS18775 +0.6 4.5 flagellar M-ring protein FliF compare
BPHYT_RS08130 +0.6 1.0 transposase compare
BPHYT_RS19890 +0.6 1.2 hypothetical protein compare
BPHYT_RS08715 +0.6 2.1 adenylyl-sulfate kinase compare
BPHYT_RS07190 +0.6 2.1 acetyltransferase compare
BPHYT_RS20545 +0.6 1.4 hypothetical protein compare
BPHYT_RS18855 +0.6 2.8 flagellar rod assembly protein FlgJ compare
BPHYT_RS09755 +0.6 1.2 glycosyl transferase family 1 compare
BPHYT_RS05340 +0.6 1.9 metal-dependent phosphohydrolase compare
BPHYT_RS01625 +0.6 2.2 chemotaxis protein CheY compare
BPHYT_RS18890 +0.6 4.3 flagellar basal body rod protein FlgC compare
BPHYT_RS30230 +0.6 2.3 LysR family transcriptional regulator compare
BPHYT_RS24350 +0.6 2.1 hypothetical protein compare
BPHYT_RS09310 +0.6 2.9 sensor histidine kinase compare
BPHYT_RS12280 +0.6 0.8 RNA helicase compare
BPHYT_RS02765 +0.6 1.9 cytochrome BD oxidase subunit I compare
BPHYT_RS21325 +0.6 2.1 hypothetical protein compare
BPHYT_RS35800 +0.6 1.0 TetR family transcriptional regulator compare
BPHYT_RS23210 +0.6 1.2 MFS transporter compare
BPHYT_RS00920 +0.5 1.9 transposase compare
BPHYT_RS11405 +0.5 1.6 hypothetical protein compare
BPHYT_RS10750 +0.5 1.0 LysR family transcriptional regulator compare
BPHYT_RS28875 +0.5 1.9 5-oxo-1,2,5-tricarboxylic-3-penten acid decarboxylase compare
BPHYT_RS25770 +0.5 1.1 hypothetical protein compare
BPHYT_RS07705 +0.5 1.8 arginine succinyltransferase compare
BPHYT_RS00505 +0.5 2.5 glyoxalase compare
BPHYT_RS32475 +0.5 1.1 dihydroxyacetone kinase compare
BPHYT_RS25005 +0.5 1.0 FMN reductase compare
BPHYT_RS33030 +0.5 0.9 hypothetical protein compare
BPHYT_RS28075 +0.5 0.9 cytochrome B561 compare
BPHYT_RS29035 +0.5 1.3 arsenic transporter compare
BPHYT_RS16590 +0.5 3.8 Fis family transcriptional regulator compare
BPHYT_RS35005 +0.5 2.3 molecular chaperone DnaJ compare
BPHYT_RS34240 +0.5 1.5 ABC transporter for L-rhamnose/L-fucose/xylitol, permease component (from data) compare
BPHYT_RS20360 +0.5 2.1 beta-lactamase compare
BPHYT_RS18790 +0.5 2.6 ATP synthase compare
BPHYT_RS26515 +0.5 2.0 HAD family hydrolase compare
BPHYT_RS26435 +0.5 1.2 hypothetical protein compare
BPHYT_RS33175 +0.5 1.6 hypothetical protein compare
BPHYT_RS22870 +0.5 1.4 copper transporter compare
BPHYT_RS33765 +0.5 0.8 membrane protein compare
BPHYT_RS01965 +0.5 1.1 tRNA-Ala compare
BPHYT_RS09850 +0.5 1.3 molybdopterin oxidoreductase compare
BPHYT_RS14450 +0.5 1.4 hypothetical protein compare
BPHYT_RS11150 +0.5 1.9 LysR family transcriptional regulator compare
BPHYT_RS22455 +0.5 1.0 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS31040 +0.5 2.0 sugar transporter compare
BPHYT_RS14005 +0.5 1.7 ABC transporter compare
BPHYT_RS10345 +0.5 0.8 flagellar motor protein MotB compare
BPHYT_RS07255 +0.5 1.9 4-oxalocrotonate decarboxylase compare
BPHYT_RS15220 +0.5 1.7 plasmid maintenance system antidote protein compare
BPHYT_RS25240 +0.5 1.3 choline-sulfatase compare
BPHYT_RS14255 +0.5 3.7 ABC transporter compare
BPHYT_RS13835 +0.5 0.8 S-adenosylhomocysteine nucleosidase compare
BPHYT_RS33070 +0.5 1.1 haloacid dehalogenase compare
BPHYT_RS17240 +0.5 0.9 cell division protein FtsW compare
BPHYT_RS12855 +0.5 1.4 hypothetical protein compare
BPHYT_RS08595 +0.5 1.4 multidrug transporter compare
BPHYT_RS31395 +0.5 2.3 thiamine pyrophosphate-binding protein compare
BPHYT_RS20440 +0.5 1.0 IclR family transcriptional regulator compare
BPHYT_RS12670 +0.5 1.7 cell division protein FtsB compare
BPHYT_RS07960 +0.5 1.0 hypothetical protein compare
BPHYT_RS33515 +0.5 3.5 porin compare
BPHYT_RS28190 +0.5 2.2 porin compare
BPHYT_RS22560 +0.5 2.2 flagellar transcriptional regulator FlhD compare
BPHYT_RS19920 +0.5 0.9 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS34640 +0.5 1.4 TetR family transcriptional regulator compare
BPHYT_RS16265 +0.5 1.6 hypothetical protein compare
BPHYT_RS10165 +0.5 1.0 transcriptional regulator compare
BPHYT_RS04430 +0.5 1.2 amino acid ABC transporter ATPase compare
BPHYT_RS31600 +0.5 1.1 hypothetical protein compare
BPHYT_RS19025 +0.5 2.7 transcriptional regulator compare
BPHYT_RS00740 +0.5 1.7 hypothetical protein compare
BPHYT_RS34745 +0.5 0.8 hypothetical protein compare
BPHYT_RS11260 +0.5 2.2 LysR family transcriptional regulator compare
BPHYT_RS08490 +0.5 1.6 Crp/Fnr family transcriptional regulator compare
BPHYT_RS06725 +0.5 1.9 MaoC family dehydratase compare
BPHYT_RS35980 +0.5 2.4 hypothetical protein compare
BPHYT_RS18880 +0.5 3.2 flagellar hook protein FlgE compare
BPHYT_RS34650 +0.5 1.4 l-threonine 3-dehydrogenase compare
BPHYT_RS04170 +0.5 1.8 hypothetical protein compare
BPHYT_RS03155 +0.5 1.6 histidine triad (HIT) protein compare
BPHYT_RS29605 +0.5 1.5 hypothetical protein compare
BPHYT_RS30720 +0.5 1.4 hypothetical protein compare
BPHYT_RS09040 +0.5 1.9 MerR family transcriptional regulator compare
BPHYT_RS03660 +0.5 2.0 mechanosensitive ion channel protein MscS compare
BPHYT_RS10185 +0.5 1.3 MarR family transcriptional regulator compare
BPHYT_RS25235 +0.5 1.1 LysR family transcriptional regulator compare
BPHYT_RS11050 +0.5 1.0 molecular chaperone compare
BPHYT_RS30825 +0.5 1.1 extradiol dioxygenase compare
BPHYT_RS22740 +0.5 2.1 ABC transporter permease compare
BPHYT_RS31015 +0.5 2.4 3-deoxy-manno-octulosonate cytidylyltransferase 2 compare
BPHYT_RS18945 +0.5 3.0 flagellar biosynthesis protein FlhB compare
BPHYT_RS07480 +0.5 0.9 FAD-dependent oxidoreductase compare
BPHYT_RS13080 +0.4 0.9 hypothetical protein compare
BPHYT_RS05915 +0.4 2.7 rubredoxin compare
BPHYT_RS23535 +0.4 1.6 ABC transporter substrate-binding protein compare
BPHYT_RS02100 +0.4 1.0 AsnC family transcriptional regulator compare
BPHYT_RS15005 +0.4 2.4 FAD-binding monooxygenase compare
BPHYT_RS13515 +0.4 2.2 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS30745 +0.4 1.2 hypothetical protein compare
BPHYT_RS17900 +0.4 1.9 hypothetical protein compare
BPHYT_RS26465 +0.4 0.7 metallophosphoesterase compare
BPHYT_RS05095 +0.4 1.6 hydroxymethylpyrimidine transporter compare
BPHYT_RS15010 +0.4 2.0 cation transporter compare
BPHYT_RS11275 +0.4 1.7 hypothetical protein compare
BPHYT_RS18900 +0.4 3.7 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS18780 +0.4 1.8 flagellar motor switch protein FliG compare
BPHYT_RS18795 +0.4 3.5 flagellar export protein FliJ compare
BPHYT_RS23430 +0.4 1.5 bifunctional D-altronate/D-mannonate dehydratase compare
BPHYT_RS18940 +0.4 3.1 flagellar biosynthesis protein FlhA compare
BPHYT_RS10685 +0.4 1.8 LysR family transcriptional regulator compare
BPHYT_RS31260 +0.4 1.0 histidine kinase compare
BPHYT_RS09695 +0.4 1.4 hypothetical protein compare
BPHYT_RS25045 +0.4 1.7 LysR family transcriptional regulator compare
BPHYT_RS05420 +0.4 1.3 glutathione S-transferase compare
BPHYT_RS08590 +0.4 1.8 hypothetical protein compare
BPHYT_RS02070 +0.4 1.6 hypothetical protein compare
BPHYT_RS24550 +0.4 1.2 hypothetical protein compare
BPHYT_RS07200 +0.4 1.5 AraC family transcriptional regulator compare
BPHYT_RS33400 +0.4 1.6 magnesium transporter CorA compare
BPHYT_RS27085 +0.4 1.1 alkylhydroperoxidase compare
BPHYT_RS31205 +0.4 1.1 peptide ABC transporter ATP-binding protein compare
BPHYT_RS20115 +0.4 1.2 transcriptional regulator compare
BPHYT_RS30375 +0.4 1.9 hypothetical protein compare
BPHYT_RS12745 +0.4 2.3 membrane protein compare
BPHYT_RS09930 +0.4 1.3 LysR family transcriptional regulator compare
BPHYT_RS13420 +0.4 2.1 hypothetical protein compare
BPHYT_RS25285 +0.4 0.7 AraC family transcriptional regulator compare
BPHYT_RS23395 +0.4 1.1 glycosyl transferase compare
BPHYT_RS32605 +0.4 1.1 hypothetical protein compare
BPHYT_RS28065 +0.4 0.9 hypothetical protein compare
BPHYT_RS32495 +0.4 0.9 ABC transporter compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium D,L-Lactate in Burkholderia phytofirmans PsJN

For carbon source Sodium D,L-Lactate across organisms