Experiment set1IT010 for Sinorhizobium meliloti 1021

Compare to:

L-Rhamnose monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc00187 +1.1 2.4 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SM_b21049 +0.9 4.5 hypothetical protein compare
SMa2289 +0.8 1.5 hypothetical protein compare
SMc01556 +0.8 1.7 hypothetical protein compare
SMc02145 +0.8 1.4 signal peptide protein compare
SMa1136 +0.8 2.1 hypothetical protein compare
SMc01933 +0.7 0.9 hypothetical protein compare
SM_b20026 +0.7 1.8 hypothetical protein compare
SMc02052 +0.7 1.0 hypothetical protein compare
SMa1323 +0.7 1.9 Transcription regulator compare
SMc01089 +0.7 1.4 hypothetical protein compare
SMc01615 +0.7 3.0 transcriptional regulator compare
SMa0846 +0.6 1.2 transposase, fragment compare
SMc03899 +0.6 0.9 hypothetical protein compare
SMc04385 +0.6 2.9 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc03996 +0.6 2.1 thiamine-phosphate pyrophosphorylase compare
SMc03780 +0.6 3.1 hypothetical protein compare
SMc00928 +0.6 1.2 signal peptide protein compare
SMc00239 +0.6 1.0 hypothetical protein compare
SMc01418 +0.6 2.8 signal peptide protein compare
SMa1240 +0.6 1.0 NapF ferredoxin component of periplasmic nitrate reductase compare
SMc00712 +0.6 1.5 hypothetical protein compare
SMc00800 +0.6 1.1 hypothetical protein compare
SMa1913 +0.6 2.7 Na+/H+ antiporter compare
SMa0314 +0.6 1.1 hypothetical protein compare
SMc03746 +0.6 2.0 hypothetical protein compare
SM_b21164 +0.6 2.4 N-formylglutamate deformylase (EC 3.5.1.68) (from data) compare
SM_b21633 +0.6 0.9 enoyl-CoA hydratase compare
SMa0851 +0.6 2.2 NodH sulfotransferase compare
SMc01557 +0.6 2.2 signal peptide protein compare
SMc03943 +0.6 2.9 hypothetical protein compare
SMc01278 +0.6 1.3 chaperone-like protein compare
SMc00347 +0.6 1.5 nucleoside diphosphate kinase regulator compare
SM_b20803 +0.5 2.1 3-deoxy-manno-octulosonate cytidylyltransferase compare
SMc00458 +0.5 4.9 transcriptional regulator compare
SMc00001 +0.5 2.0 hypothetical protein compare
SMc02778 +0.5 0.8 hydroxyacid aldolase compare
SMa1095 +0.5 0.8 hypothetical protein compare
SMa0736 +0.5 1.7 hypothetical protein compare
SM_b21591 +0.5 1.7 GntR family transcriptional regulator compare
SMc01127 +0.5 2.1 hypothetical protein compare
SMc03900 +0.5 4.3 cyclic beta-1,2-glucan ABc transporter compare
SMa1171 +0.5 1.5 hypothetical protein compare
SMa0955 +0.5 1.0 GntR family transcriptional regulator compare
SM_b21263 +0.5 3.1 mureinpeptideoligopeptide ABC transporter permease compare
SMa1213 +0.5 2.8 FixP1 di-heme cytochrome c compare
SM_b21271 +0.5 2.7 nucleotide-binding protein compare
SMc00029 +0.5 1.8 hypothetical protein compare
SM_b21569 +0.5 1.4 transcriptional regulator compare
SMa1200 +0.5 2.2 hypothetical protein compare
SMa0998 +0.5 1.9 ISRm25b transposase compare
SM_b21304 +0.5 2.4 NG,NG-dimethylarginine dimethylaminohydrolase (dimethylargininase) protein compare
SMc01419 +0.5 1.2 RNA polymerase sigma factor protein compare
SMc01698 +0.5 2.2 oxidoreductase compare
SM_b21397 +0.5 2.8 hypothetical protein compare
SMa0882 +0.5 1.1 hypothetical protein compare
SMc01160 +0.5 1.9 hypothetical protein compare
SMc03159 +0.5 1.5 ABC transporter ATP-binding protein compare
SMc00484 +0.5 1.7 hypothetical protein compare
SM_b20139 +0.5 2.1 hypothetical protein compare
SMa0674 +0.5 1.1 hypothetical protein compare
SMc02366 +0.5 3.8 transcriptional regulator compare
SMc03008 +0.5 0.8 chemotaxis protein compare
SMa1124 +0.5 1.3 hypothetical protein compare
SMa0166 +0.5 1.3 hypothetical protein compare
SM_b20150 +0.4 2.2 inositol monophosphatase compare
SM_b20691 +0.4 1.1 hypothetical protein compare
SMc04391 +0.4 0.5 3-ketoacyl-ACP reductase compare
SMc01202 +0.4 3.3 lipoprotein compare
SMc04382 +0.4 4.3 beta-(1,2)-glucan production associated transmembrane protein compare
SMa0360 +0.4 1.7 transposase compare
SMc01347 +0.4 2.1 hypothetical protein compare
SM_b21191 +0.4 1.9 surface saccharide ABC transporter ATP-binding/membrane spanning protein compare
SMc01153 +0.4 0.9 enoyl-CoA hydratase compare
SMa2349 +0.4 1.5 xanthine dehydrogenase iron-sulfur-binding subunit compare
SMc04094 +0.4 1.2 hypothetical protein compare
SM_b20468 +0.4 2.7 sensory transduction DNA-binding response regulator protein compare
SMc02901 +0.4 0.6 hypothetical protein compare
SM_b20083 +0.4 2.0 hypothetical protein compare
SMa1398 +0.4 1.2 3-ketoacyl-ACP reductase compare
SMc01103 +0.4 1.7 Ribokinase (EC 2.7.1.15) (from data) compare
SMc01116 +0.4 2.0 acyltransferase transmembrane protein compare
SMc02134 +0.4 2.2 hypothetical protein compare
SMa0831 +0.4 1.9 NifX iron-molybdenum cluster-binding protein compare
SMc03312 +0.4 1.3 transposase ISRM11/ISRM2011-2 compare
SMc01241 +0.4 1.0 hypothetical protein compare
SMc00522 +0.4 3.4 ATP-dependent RNA helicase compare
SMa1073 +0.4 1.1 TRm23b IS ATP-binding protein compare
SMc01186 +0.4 1.9 hypothetical protein compare
SMc04441 +0.4 2.2 hypothetical protein compare
SMa1093 +0.4 1.8 hypothetical protein compare
SM_b20387 +0.4 0.8 transcriptional regulator compare
SM_b20075 +0.4 1.2 hypothetical protein compare
SMc03176 +0.4 2.7 hypothetical protein compare
SMc04242 +0.4 0.6 zinc uptake regulation protein compare
SM_b20323 +0.4 0.7 transcriptional regulator compare
SM_b21487 +0.4 3.1 cytochrome o ubiquinol oxidase subunit II compare
SMc01337 +0.4 0.9 hypothetical protein compare
SMc01012 +0.4 0.5 hypothetical protein compare
SMc03022 +0.4 2.8 flagellar motor protein MotA compare
SMc00593 +0.4 1.6 hypothetical protein compare
SMc01099 +0.4 1.1 tRNA pseudouridine synthase A compare
SMc02250 +0.4 2.1 large-conductance mechanosensitive channel compare
SMa1100 +0.4 1.3 hypothetical protein compare
SMa1017 +0.4 1.1 hypothetical protein compare
SMa1149 +0.4 1.8 hypothetical protein compare
SMc00588 +0.4 1.0 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc04202 +0.4 1.5 transmembrane protein compare
SMc04266 +0.4 1.9 hypothetical protein compare
SMc02879 +0.4 1.2 hypothetical protein compare
SMa0286 +0.4 1.0 hypothetical protein compare
SMa1639 +0.4 0.7 hypothetical protein compare
SMc00489 +0.4 2.1 hypothetical protein compare
SMa1053 +0.4 1.0 hypothetical protein compare
SMa0132 +0.4 1.1 hypothetical protein compare
SMa0450 +0.4 0.8 hypothetical protein compare
SMa0518 +0.4 1.6 hypothetical protein compare
SMa0950 +0.4 2.1 ABC transporter substrate-binding protein compare
SMc00656 +0.4 0.9 hypothetical protein compare
SMa1838 +0.4 1.5 dehydrogenase compare
SMc01422 +0.4 1.1 hypothetical protein compare
SMc00280 +0.4 1.0 hypothetical protein compare
SMc01006 +0.4 2.1 hypothetical protein compare
SM_b21488 +0.4 2.8 cytochrome o ubiquinol oxidase subunit I compare
SMc02647 +0.4 1.0 transcriptional regulator compare
SMc00030 +0.4 1.7 hypothetical protein compare
SM_b21084 +0.4 0.8 hypothetical protein compare
SM_b20654 +0.4 1.9 hypothetical protein compare
SM_b20774 +0.4 1.5 hypothetical protein compare
SMc04085 +0.4 1.5 hypothetical protein compare
SM_b21664 +0.4 2.0 hypothetical protein compare
SMa0575 +0.4 0.9 hypothetical protein compare
SMc01091 +0.4 0.8 hypothetical protein compare
SMc00175 +0.4 1.9 ABC transporter ATP-binding protein compare
SM_b21473 +0.4 1.9 hypothetical protein compare
SMc02029 +0.4 1.6 peptide ABC transporter permease compare
SMc00194 +0.4 1.6 hypothetical protein compare
SM_b20089 +0.4 1.3 hypothetical protein compare
SMc00099 +0.3 1.3 alkylphosphonate uptake protein compare
SMc00329 +0.3 1.4 iron response regulator protein compare
SMc01120 +0.3 1.0 hypothetical protein compare
SMc03810 +0.3 1.6 hypothetical protein compare
SM_b20882 +0.3 1.1 hypothetical protein compare
SMc04319 +0.3 0.9 hypothetical protein compare
SM_b20665 +0.3 1.2 partial transposase of insertion sequence ISRm17 protein compare
SM_b20186 +0.3 1.4 glutathione-dependent formaldehyde-activating protein compare
SM_b20265 +0.3 1.4 amino acid ABC transporter permease compare
SMc02497 +0.3 0.9 hypothetical protein compare
SM_b20891 +0.3 2.0 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) compare
SMc04217 +0.3 1.7 transmembrane signal peptide protein compare
SMa1597 +0.3 1.1 Pilus assembly chaperone compare
SMc03038 +0.3 1.3 flagellin B protein compare
SMa2008 +0.3 2.0 transcriptional regulator compare
SMa0793 +0.3 1.4 hypothetical protein compare
SM_b20647 +0.3 1.5 hypothetical protein compare
SMc01144 +0.3 0.9 ribonuclease PH compare
SMc01724 +0.3 0.6 hypothetical protein compare
SM_b21665 +0.3 1.9 hypothetical protein compare
SMa1063 +0.3 0.7 hypothetical protein compare
SMc00147 +0.3 0.9 hypothetical protein compare
SM_b20974 +0.3 2.3 oxidoreductase compare
SMc02367 +0.3 2.7 sensor histidine kinase transmembrane protein compare
SMc01433 +0.3 1.5 hypothetical protein compare
SM_b21262 +0.3 2.7 mureinpeptideoligopeptide ABC transporter permease compare
SM_b21170 +0.3 1.5 guanylate kinase compare
SM_b21580 +0.3 0.7 hypothetical protein compare
SMc00413 +0.3 1.3 hypothetical protein compare
SMc01512 +0.3 1.6 hemin binding periplasmic transmembrane protein compare
SMc03154 +0.3 1.6 hypothetical protein compare
SMc00024 +0.3 1.3 chromosome partition protein compare
SM_b20260 +0.3 0.9 hypothetical protein compare
SM_b21218 +0.3 1.1 glucosamine-6-phosphate deaminase, isomerizing (EC 3.5.99.6) (from data) compare
SMc01575 +0.3 2.4 hypothetical protein compare
SMc01775 +0.3 1.7 acetyltransferase compare
SM_b21003 +0.3 1.1 oxidoreductase compare
SM_b20547 +0.3 1.0 hypothetical protein compare
SM_b21072 +0.3 2.0 hypothetical protein compare
SM_b20263 +0.3 1.8 amino acid ABC transporter substrate-binding protein compare
SMc02866 +0.3 0.6 transcriptional regulator compare
SMc03748 +0.3 1.3 hypothetical protein compare
SMa2195 +0.3 1.4 ABC transporter ATP-binding protein compare
SMa0776 +0.3 0.8 TRm23b IS ATP-binding protein compare
SM_b21258 +0.3 1.6 adenylate cyclase compare
SM_b20413 +0.3 0.5 hypothetical protein compare
SM_b20806 +0.3 1.3 hypothetical protein compare
SM_b20812 +0.3 2.4 hypothetical protein compare
SMc03134 +0.3 1.2 hypothetical protein compare
SMa1111 +0.3 1.4 hypothetical protein compare
SM_b20267 +0.3 0.8 D-amino acid dehydrogenase compare
SMc00174 +0.3 2.5 hypothetical protein compare
SMa1310 +0.3 0.8 VirB7-like protein compare
SMa0995 +0.3 0.8 TRm5 transposase compare
SMc02429 +0.3 2.2 transcriptional regulator compare
SMc01135 +0.3 2.0 protease IV transmembrane protein compare
SMa2041 +0.3 1.7 oxidoreductase compare
SMc03149 +0.3 1.9 hypothetical protein compare
SMc01729 +0.3 1.5 hypothetical protein compare
SM_b20302 +0.3 0.6 hypothetical protein compare
SMc02420 +0.3 1.1 cytosine deaminase compare
SMa1319 +0.3 1.3 VirB2 type IV secretion protein compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source L-Rhamnose monohydrate in Sinorhizobium meliloti 1021

For carbon source L-Rhamnose monohydrate across organisms