Experiment set1IT008 for Sinorhizobium meliloti 1021

Compare to:

D-Galactose carbon source

200 most important genes:

  gene name fitness t score description  
SMc02899 -8.8 -6.1 prephenate dehydratase compare
SMc02766 -8.8 -8.6 tryptophan synthase subunit beta compare
SMc04405 -8.4 -5.8 3-isopropylmalate dehydrogenase compare
SMc02767 -8.3 -8.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc03797 -8.2 -8.0 homoserine O-succinyltransferase compare
SMc00236 -8.2 -5.6 Indole-3-glycerol phosphate synthase compare
SMc02572 -8.2 -5.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc00640 -8.0 -5.5 phosphoserine aminotransferase compare
SMc00917 -8.0 -5.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc04002 -8.0 -7.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02569 -7.9 -5.5 imidazole glycerol phosphate synthase subunit HisF compare
SMc01726 -7.9 -7.7 acetylglutamate kinase compare
SMc01801 -7.9 -5.1 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02725 -7.6 -10.5 anthranilate synthase compare
SMc00235 -7.5 -7.3 anthranilate phosphoribosyltransferase compare
SMc01431 -7.5 -7.3 acetolactate synthase 3 catalytic subunit compare
SMc02717 -7.4 -11.3 2-isopropylmalate synthase compare
SMc03823 -7.4 -12.3 isopropylmalate isomerase large subunit compare
SMc02217 -7.3 -5.1 O-succinylhomoserine sulfhydrylase compare
SMc00614 -7.3 -7.1 phosphoribosylglycinamide formyltransferase compare
SMc02137 -7.3 -5.0 ornithine carbamoyltransferase compare
SMc04045 -7.2 -7.1 dihydroxy-acid dehydratase compare
SMc00882 -7.1 -4.9 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMc02245 -7.0 -6.7 dihydroorotate dehydrogenase 2 compare
SMc04026 -7.0 -10.7 glutamate synthase compare
SMc01843 -7.0 -12.8 5,10-methylenetetrahydrofolate reductase compare
SMc01494 -7.0 -10.6 phosphoserine phosphatase compare
SMc01361 -6.9 -4.8 dihydroorotase compare
SMc00711 -6.8 -6.4 cyclohexadienyl dehydrogenase compare
SMc04028 -6.8 -17.7 glutamate synthase compare
SMc02165 -6.8 -4.7 orotate phosphoribosyltransferase compare
SMa1635 -6.6 -2.5 hypothetical protein compare
SMc00918 -6.6 -11.1 ATP phosphoribosyltransferase regulatory subunit compare
SMc00412 -6.6 -4.6 orotidine 5'-phosphate decarboxylase compare
SMc03776 -6.6 -4.5 gamma-glutamyl kinase compare
SMc02123 -6.6 -4.3 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc03112 -6.6 -17.2 B12-dependent methionine synthase compare
SMc03895 -6.5 -16.9 pyruvate carboxylase compare
SMc02765 -6.4 -12.3 tryptophan synthase subunit alpha compare
SMc01004 -6.4 -9.4 phosphoribosyl-AMP cyclohydrolase compare
SMc02574 -6.4 -7.6 imidazoleglycerol-phosphate dehydratase compare
SMc01360 -6.3 -4.4 aspartate carbamoyltransferase catalytic subunit compare
SMc00488 -6.3 -16.6 phosphoribosylformylglycinamidine synthase II compare
SMc00554 -6.2 -9.5 amidophosphoribosyltransferase compare
SMc02755 -6.1 -6.0 S-adenosyl-L-homocysteine hydrolase compare
SMc00334 -6.1 -3.7 cytidylate kinase compare
SMc03777 -5.9 -9.9 gamma-glutamyl phosphate reductase compare
SMc00493 -5.8 -7.4 phosphoribosylformylglycinamidine synthase I compare
SM_b21175 -5.8 -5.3 phosphate uptake ABC transporter permease compare
SMc00495 -5.8 -6.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00993 -5.8 -12.9 phosphoribosylamine--glycine ligase compare
SM_b21176 -5.7 -5.6 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03229 -5.6 -3.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00815 -5.6 -3.6 inosine 5'-monophosphate dehydrogenase compare
SMc04088 -5.5 -9.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00615 -5.5 -5.4 phosphoribosylaminoimidazole synthetase compare
SMc02124 -5.4 -14.6 nitrite reductase compare
SMc00131 -5.4 -16.1 transcriptional regulator compare
SMc00293 -5.2 -13.4 homoserine dehydrogenase compare
SMc00494 -5.2 -2.8 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03978 -5.0 -3.5 transketolase compare
SMc03826 -5.0 -4.9 argininosuccinate synthase compare
SMc02570 -5.0 -4.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01215 -5.0 -3.4 carbamoyl phosphate synthase large subunit compare
SMc00641 -4.9 -7.3 D-3-phosphoglycerate dehydrogenase compare
SMc01569 -4.9 -2.5 carbamoyl phosphate synthase small subunit compare
SMc00881 -4.8 -12.7 2-dehydro-3-deoxygalactonokinase conserved
SMc02166 -4.8 -11.9 dihydroorotase compare
SMc01880 -4.6 -4.5 pantoate--beta-alanine ligase compare
SMc04001 -4.6 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02307 -4.6 -11.1 histidinol dehydrogenase compare
SMc00091 -4.6 -13.6 sulfate adenylyltransferase compare
SMc01770 -4.5 -2.0 serine hydroxymethyltransferase compare
SMc01054 -4.5 -4.9 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00092 -4.5 -14.2 phosphoadenosine phosphosulfate reductase compare
SMc01881 -4.5 -5.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00017 -4.4 -2.3 homoserine kinase compare
SMc02246 -4.4 -1.6 hypothetical protein compare
SMc03795 -4.3 -2.3 isopropylmalate isomerase small subunit compare
SMc02138 -4.2 -7.4 acetylornithine transaminase compare
SMc00090 -4.2 -10.1 sulfate adenylyltransferase compare
SMc00294 -4.2 -13.5 aminotransferase compare
SM_b21177 -4.2 -6.9 phosphate uptake ABC transporter ATP-binding protein compare
SM_b21174 -4.0 -7.7 phosphate uptake ABC transporter permease compare
SMc01053 -3.9 -5.3 siroheme synthase compare
SMc03763 -3.8 -4.5 cytosine-specific methyltransferase compare
SMc00963 -3.8 -3.0 hypothetical protein compare
SMc00876 -3.7 -8.9 ATP-binding MRP protein compare
SMc02707 -3.7 -5.1 hypothetical protein compare
SMc03979 -3.6 -3.9 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02724 -3.4 -6.1 hypothetical protein compare
SMc03981 -3.4 -4.7 phosphoglycerate kinase compare
SMc01578 -3.2 -16.5 aspartate aminotransferase compare
SMc02983 -3.1 -8.5 ornithine, DAP, or arginine decarboxylase compare
SMc04346 -3.1 -3.7 ketol-acid reductoisomerase compare
SMc00414 -2.9 -9.0 hypothetical protein compare
SMc01124 -2.8 -8.5 PII uridylyl-transferase compare
SMc00588 -2.6 -3.6 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc01852 -2.6 -11.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc01850 -2.6 -4.8 hypothetical protein compare
SMc00880 -2.4 -2.8 oxidoreductase compare
SMc01206 -2.4 -3.0 queuine tRNA-ribosyltransferase compare
SMc01147 -2.2 -4.0 coproporphyrinogen III oxidase compare
SMc02753 -2.0 -2.2 PTS system transporter subunit IIA compare
SMc00302 -1.9 -2.7 hypothetical protein compare
SMc01441 -1.9 -7.5 membrane bound protease compare
SMc02147 -1.8 -8.6 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc00450 -1.8 -3.2 protoheme IX farnesyltransferase compare
SMc02909 -1.7 -2.6 transglycosylase transmembrane protein compare
SMc00619 -1.7 -2.1 hypothetical protein compare
SMc02582 -1.7 -3.9 hypothetical protein compare
SMc04296 -1.7 -1.3 cell division protein FtsZ compare
SMc01440 -1.6 -4.5 hydrolase serine protease transmembrane protein compare
SMc02058 -1.6 -1.7 YAJC protein compare
SMc02641 -1.6 -4.9 UDP-glucose 6-dehydrogenase compare
SMc01842 -1.6 -1.7 methyltransferase transcription regulator protein compare
SMc01207 -1.6 -2.0 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc03100 -1.6 -1.4 hypothetical protein compare
SMc02659 -1.6 -5.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc03070 -1.5 -6.2 glucose-6-phosphate 1-dehydrogenase compare
SMc03924 -1.5 -7.7 glycogen synthase compare
SMc00982 -1.5 -7.5 dioxygenase compare
SMc00838 -1.5 -6.7 hypothetical protein compare
SMc00580 -1.5 -2.8 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02115 -1.3 -1.1 hypothetical protein compare
SM_b20955 -1.3 -2.9 endo-beta-1,3-1,4-glycanase compare
SMc01368 -1.3 -5.3 transport transmembrane protein compare
SMa1365 -1.3 -1.5 ATP-binding protein compare
SMc02640 -1.3 -4.2 UDP-glucuronic acid epimerase compare
SMc01043 -1.3 -5.6 nitrogen assimilation regulatory protein compare
SMc00353 -1.2 -2.7 transmembrane protein compare
SMc00726 -1.2 -1.0 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00053 -1.2 -1.0 monovalent cation/H+ antiporter subunit C compare
SMc02140 -1.2 -2.2 phosphate regulon transcriptional regulatory protein compare
SMc01438 -1.1 -4.2 protease precursor signal peptide protein compare
SMc02141 -1.1 -4.5 phosphate transporter PhoU compare
SMc02856 -1.1 -7.1 penicillin-binding protein compare
SMc02985 -1.1 -6.4 hypothetical protein compare
SMc02232 -1.1 -2.7 hypothetical protein compare
SMc01845 -1.1 -2.5 transglycosylase transmembrane protein compare
SMc02833 -1.1 -1.9 penicillin-insensitive murein endopeptidase compare
SMc04361 -1.1 -3.6 hydantoin racemase compare
SMc02543 -1.0 -4.5 hypothetical protein compare
SMc00060 -1.0 -6.1 hypothetical protein compare
SMc02573 -1.0 -1.2 hypothetical protein compare
SM_b20595 -1.0 -4.5 cell division protein FtsK compare
SMc00296 -1.0 -5.6 POLY3-hydroxybutyrate polymerase compare
SMc00295 -1.0 -1.4 hypothetical protein compare
SMc03878 -1.0 -2.7 acetoacetyl-CoA reductase compare
SMc01208 -1.0 -2.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc04005 -1.0 -4.0 pyruvate kinase compare
SMc00191 -1.0 -1.6 hypothetical protein compare
SMc00762 -0.9 -4.6 glutamine synthetase compare
SM_b20948 -0.9 -1.6 glucosyltransferase compare
SM_b21213 -0.9 -3.9 serinethreonine protein phosphatase compare
SMc01042 -0.9 -2.7 nitrogen regulation protein compare
SMc02227 -0.9 -3.3 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc02247 -0.9 -1.2 signal peptide protein compare
SMc01430 -0.9 -4.2 acetolactate synthase 3 regulatory subunit compare
SMc02897 -0.9 -2.1 cytochrome C transmembrane protein compare
SMc00987 -0.9 -2.4 hypothetical protein compare
SMc00492 -0.9 -0.9 hypothetical protein compare
SM_b21347 -0.9 -1.5 pectin degradation protein compare
SM_b20293 -0.9 -1.1 hypothetical protein compare
SMc04348 -0.9 -0.9 transcriptional regulator compare
SMa1095 -0.8 -0.8 hypothetical protein compare
SMc00579 -0.8 -2.1 dimethyladenosine transferase compare
SMc00914 -0.8 -3.6 oxidoreductase compare
SMc04357 -0.8 -1.4 hypothetical protein compare
SMc01595 -0.8 -3.1 sensor histidine kinase transmembrane protein compare
SMc02234 -0.8 -2.1 hypothetical protein compare
SMc03053 -0.8 -1.2 flagellar biosynthesis protein FliQ compare
SMc02799 -0.8 -2.3 16S rRNA methyltransferase GidB compare
SMc01131 -0.8 -1.5 hypothetical protein compare
SMc02451 -0.8 -1.2 hypothetical protein compare
SMc00761 -0.8 -4.4 oxidoreductase compare
SMc03980 -0.8 -3.7 hypothetical protein compare
SMc02142 -0.8 -4.1 phosphate transporter ATP-binding protein compare
SM_b21467 -0.8 -1.9 hypothetical protein compare
SMc00981 -0.8 -4.1 ferredoxin protein compare
SMc02812 -0.8 -1.6 hypothetical protein compare
SMc00883 -0.7 -5.8 L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) (from data) compare
SMa0085 -0.7 -2.6 dehydrogenase compare
SMc04224 -0.7 -0.9 hypothetical protein compare
SMc00405 -0.7 -4.0 hypothetical protein compare
SMc04121 -0.7 -1.8 uracil phosphoribosyltransferase compare
SMc00132 -0.7 -1.8 hypothetical protein compare
SMc04243 -0.7 -3.8 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc02121 -0.7 -1.4 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc03135 -0.7 -1.9 amino-acid transport system ATP-binding ABC transporter protein compare
SM_b20329 -0.7 -4.4 required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) (from data) compare
SMc00514 -0.7 -2.2 monooxygenase compare
SMc00288 -0.7 -3.7 signal peptide protein compare
SM_b20823 -0.7 -4.1 cell surface saccharide synthesis protein compare
SMc00804 -0.7 -1.4 hypothetical protein compare
SMc04024 -0.7 -3.8 membrane-bound lytic murein transglycosylase compare
SM_b21373 -0.7 -2.0 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SMa1770 -0.7 -1.0 hypothetical protein compare
SM_b20547 -0.7 -2.2 hypothetical protein compare
SMc04233 -0.7 -1.5 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Galactose in Sinorhizobium meliloti 1021

For carbon source D-Galactose across organisms