Experiment set1IT004 for Caulobacter crescentus NA1000

Compare to:

D-Xylose carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01851 +2.7 18.7 quinol cytochrome oxidase polypeptide II compare
CCNA_01848 +2.7 16.3 quinol cytochrome oxidase polypeptide IV compare
CCNA_01850 +2.7 18.4 quinol cytochrome oxidase polypeptide I compare
CCNA_02957 +2.7 6.0 ArsR-family transcriptional regulator compare
CCNA_01712 +2.7 15.2 CopY/TcrY family transcriptional repressor compare
CCNA_02644 +2.6 7.6 cell division protein FtsL compare
CCNA_01849 +2.4 12.5 quinol cytochrome oxidase polypeptide III compare
CCNA_03287 +2.4 8.2 PadR-family transcriptional regulator compare
CCNA_01840 +2.4 18.4 MerR-family transcriptional regulator compare
CCNA_02103 +2.3 8.8 hypothetical protein compare
CCNA_01979 +2.3 10.3 LexA repressor compare
CCNA_01526 +2.3 7.2 flagellar biosynthesis regulatory protein flaF compare
CCNA_01801 +2.2 10.2 hypothetical protein compare
CCNA_03064 +2.2 10.0 PadR-family transcriptional regulator compare
CCNA_03280 +2.2 17.8 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01684 +2.1 9.8 phenylalanine-4-hydroxylase compare
CCNA_01790 +2.1 7.6 protein translocase subunit secG compare
CCNA_01931 +2.1 10.9 TetR-family transcriptional regulator compare
CCNA_03012 +2.1 11.3 peroxiredoxin compare
CCNA_01804 +2.1 11.1 glutathione peroxidase compare
CCNA_00684 +2.1 8.2 anti-sigma factor, ChrR-family compare
CCNA_03325 +2.1 6.1 hypothetical protein compare
CCNA_00505 +2.1 8.9 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01094 +2.1 3.9 hypothetical protein compare
CCNA_02416 +2.0 9.8 DNA-binding protein HU compare
CCNA_02025 +2.0 4.3 hypothetical protein compare
CCNA_03252 +2.0 14.3 CopY/TcrY-family transcriptional regulator compare
CCNA_01681 +2.0 6.7 RimI-like acetyltransferase compare
CCNA_03271 +2.0 12.7 methionine gamma-lyase compare
CCNA_03612 +2.0 7.9 HTH XRE-family transcriptional regulator compare
CCNA_01361 +2.0 3.9 PepSY superfamily protein compare
CCNA_01913 +2.0 11.7 MarR-family transcriptional regulator compare
CCNA_01059 +2.0 14.6 S-layer protein rsaA compare
CCNA_02021 +2.0 7.0 hypothetical protein compare
CCNA_01802 +1.9 3.7 hypothetical protein compare
CCNA_02980 +1.9 11.7 tryptophan 2,3-dioxygenase compare
CCNA_01573 +1.9 9.1 ArsR-family transcriptional regulator compare
CCNA_03893 +1.9 4.2 hypothetical protein compare
CCNA_02567 +1.9 13.2 sensory transduction histidine kinase pleC compare
CCNA_02133 +1.9 7.3 glucokinase compare
CCNA_03030 +1.9 9.7 cytochrome c2 compare
CCNA_02732 +1.9 4.8 hypothetical protein compare
CCNA_03964 +1.9 3.1 hypothetical protein compare
CCNA_03289 +1.9 12.6 HicB-family RNA-binding protein compare
CCNA_03989 +1.9 13.1 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_02646 +1.9 3.1 cell division protein MraZ compare
CCNA_02448 +1.8 11.9 hypothetical protein compare
CCNA_R0037 +1.8 6.2 tRNA-Glu compare
CCNA_01847 +1.8 11.9 cytochrome c oxidase assembly protein Surf1 compare
CCNA_00028 +1.8 4.8 TonB-dependent receptor compare
CCNA_02447 +1.8 12.0 PspA/IM30 family regulatory protein compare
CCNA_01593 +1.8 9.6 Xaa-pro aminopeptidase compare
CCNA_01742 +1.8 7.8 hypothetical protein compare
CCNA_03123 +1.8 11.0 ArsR-family transcriptional regulator compare
CCNA_03479 +1.8 9.0 MarR-family transcriptional regulator compare
CCNA_00999 +1.8 5.9 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_01541 +1.8 11.2 LysR-family transcriptional regulator compare
CCNA_03762 +1.8 4.4 acetolactate synthase-related protein compare
CCNA_01186 +1.8 5.7 hypothetical protein compare
CCNA_02617 +1.8 11.8 histidinol-phosphate aminotransferase compare
CCNA_03863 +1.7 4.8 hypothetical protein compare
CCNA_00939 +1.7 6.3 MarR-family transcriptional regulator compare
CCNA_00705 +1.7 4.7 hypothetical protein compare
CCNA_03062 +1.7 9.1 cell wall hydrolase family protein compare
CCNA_01655 +1.7 8.0 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_00264 +1.7 11.0 C4-dicarboxylate transport protein compare
CCNA_02616 +1.7 10.3 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02619 +1.7 13.0 stomatin/prohibitin-related protein compare
CCNA_01528 +1.7 8.8 flagellin fljK compare
CCNA_02475 +1.7 11.0 transcriptional regulator vanR compare
CCNA_01690 +1.7 5.0 MAPEG family membrane protein compare
CCNA_00846 +1.7 14.1 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_02026 +1.7 3.9 hypothetical protein compare
CCNA_00527 +1.7 8.6 hypothetical protein compare
CCNA_01505 +1.7 3.8 hypothetical protein compare
CCNA_03108 +1.7 11.9 TonB-dependent outer membrane receptor compare
CCNA_01752 +1.7 7.9 YicC-family protein compare
CCNA_03514 +1.7 8.3 cytochrome c oxidase assembly protein ctaG compare
CCNA_03519 +1.7 5.7 PadR-family transcriptional regulator compare
CCNA_02591 +1.7 5.5 glutaredoxin compare
CCNA_01728 +1.7 8.1 short chain dehydrogenase compare
CCNA_03129 +1.7 10.5 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_00947 +1.7 11.7 flagellar hook protein FlgE compare
CCNA_00518 +1.7 8.2 LSU ribosomal protein L25P compare
CCNA_03805 +1.7 10.4 PadR-family transcriptional regulator compare
CCNA_01968 +1.6 3.7 pentapeptide repeats containing protein compare
CCNA_02976 +1.6 6.7 MCP-signal associated domain protein compare
CCNA_00675 +1.6 5.7 VapC-like PIN domain ribonuclease compare
CCNA_03688 +1.6 7.4 AsnC-family transcriptional regulator compare
CCNA_01942 +1.6 6.0 Rrf2 family protein compare
CCNA_00945 +1.6 8.0 chemotaxis protein MotD compare
CCNA_01193 +1.6 11.4 amylosucrase compare
CCNA_00954 +1.6 10.6 AAA-family response regulator flbD compare
CCNA_01679 +1.6 9.0 succinylglutamic semialdehyde dehydrogenase compare
CCNA_02575 +1.6 4.9 hypothetical protein compare
CCNA_03951 +1.6 4.6 hypothetical protein compare
CCNA_00895 +1.6 7.3 hypothetical protein compare
CCNA_01453 +1.6 4.0 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_03949 +1.6 6.4 hypothetical protein compare
CCNA_00447 +1.6 7.7 chemotaxis protein cheD compare
CCNA_00998 +1.6 7.3 ROS/MUCR transcriptional regulator compare
CCNA_02942 +1.6 4.8 nucleoside-diphosphate-sugar epimerase compare
CCNA_02330 +1.6 5.8 hypothetical protein compare
CCNA_02339 +1.6 9.0 methyltransferase compare
CCNA_01678 +1.6 8.0 arginine N-succinyltransferase, beta chain compare
CCNA_00699 +1.6 3.5 LSU ribosomal protein L28P compare
CCNA_02328 +1.6 1.0 cell cycle regulatory protein GcrA compare
CCNA_00803 +1.6 5.2 chemotaxis protein cheW compare
CCNA_01074 +1.6 1.7 entericidin B-like protein compare
CCNA_R0054 +1.6 2.6 tRNA-Gly compare
CCNA_01619 +1.5 7.9 NYN domain protein compare
CCNA_01405 +1.5 3.6 GIY-YIG domain protein compare
CCNA_00207 +1.5 7.3 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_01926 +1.5 7.1 GGDEF diguanylate cyclase DgcB compare
CCNA_01780 +1.5 10.2 exopolyphosphatase compare
CCNA_02289 +1.5 9.0 MarR/EmrR family transcriptional regulator compare
CCNA_03215 +1.5 9.0 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_02309 +1.5 4.4 EF hand domain protein compare
CCNA_02063 +1.5 6.9 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_03214 +1.5 7.2 hypothetical protein compare
CCNA_01608 +1.5 6.6 TetR-family transcriptional regulator compare
CCNA_02728 +1.5 6.5 hypothetical protein compare
CCNA_01739 +1.5 7.3 LSU ribosomal protein L9P compare
CCNA_01533 +1.5 6.1 hypothetical protein compare
CCNA_03740 +1.5 7.0 cysteine synthase compare
CCNA_03689 +1.5 10.2 alanine dehydrogenase compare
CCNA_00807 +1.5 1.8 ribonuclease P protein component compare
CCNA_02805 +1.5 5.5 hypothetical protein compare
CCNA_01827 +1.5 6.5 cobyric acid synthase CobQ compare
CCNA_03089 +1.5 6.8 hypothetical protein compare
CCNA_03105 +1.5 6.3 DnaJ domain protein compare
CCNA_01575 +1.5 9.0 glucose / sorbosone dehydrogenase compare
CCNA_03043 +1.5 3.6 type IV pilin protein pilA compare
CCNA_00781 +1.5 10.2 two-component receiver protein CpdR compare
CCNA_02419 +1.5 3.7 TonB1 protein compare
CCNA_01008 +1.5 9.8 urocanate hydratase compare
CCNA_01406 +1.5 6.8 metal-dependent hydrolase compare
CCNA_02297 +1.5 5.4 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_02367 +1.5 10.3 CelR-family transcriptional regulator compare
CCNA_01731 +1.5 4.8 colicin V production protein CvpA compare
CCNA_02338 +1.5 7.3 hypothetical protein compare
CCNA_01677 +1.5 6.1 carboxypeptidase G2 precursor compare
CCNA_00931 +1.5 9.5 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_00506 +1.5 7.3 cytochrome b compare
CCNA_02379 +1.5 7.4 hypothetical protein compare
CCNA_00944 +1.4 6.6 flagellar hook length determination protein compare
CCNA_00756 +1.4 3.1 hypothetical protein compare
CCNA_00441 +1.4 6.3 chemotaxis receiver domain protein cheYI compare
CCNA_02760 +1.4 2.3 hypothetical protein compare
CCNA_00950 +1.4 10.2 flagellar M-ring protein FliF compare
CCNA_00446 +1.4 5.8 chemotaxis receiver domain protein cheYII compare
CCNA_03808 +1.4 8.1 organic solvent resistance transport system Ttg2C protein compare
CCNA_03961 +1.4 3.1 hypothetical protein compare
CCNA_01751 +1.4 4.9 aminodeoxychorismate lyase compare
CCNA_03371 +1.4 5.6 bacterioferritin compare
CCNA_03400 +1.4 2.1 hypothetical protein compare
CCNA_03524 +1.4 7.6 di-/tripeptide transporter compare
CCNA_02287 +1.4 7.7 TetR-family transcriptional regulator compare
CCNA_03622 +1.4 6.9 beta-lactamase repressor compare
CCNA_01525 +1.4 6.5 flagellar biosynthesis repressor flbT compare
CCNA_01680 +1.4 7.8 succinylarginine dihydrolase compare
CCNA_03513 +1.4 6.7 cytochrome c oxidase subunit III coxC compare
CCNA_03944 +1.4 1.0 hypothetical protein compare
CCNA_01339 +1.4 5.3 ArsR-family transcriptional regulator compare
CCNA_03372 +1.4 3.4 bacterioferritin-associated ferredoxin compare
CCNA_00031 +1.4 7.1 toxin protein VapC compare
CCNA_02560 +1.4 8.5 stalk cross-band protein StpC compare
CCNA_02134 +1.4 8.9 phosphogluconate dehydratase compare
CCNA_00448 +1.4 7.0 cheU protein compare
CCNA_02843 +1.4 3.2 toxin protein parE-3 compare
CCNA_01415 +1.4 9.8 methyltransferase compare
CCNA_02910 +1.4 10.9 TonB-dependent receptor compare
CCNA_01375 +1.4 5.5 lactoylglutathione lyase compare
CCNA_00129 +1.4 6.0 hypothetical protein compare
CCNA_00885 +1.4 6.9 MazE-like antitoxin protein compare
CCNA_01393 +1.4 9.9 soluble lytic murein transglycosylase compare
CCNA_01181 +1.4 6.1 hypothetical protein compare
CCNA_02037 +1.4 6.9 ATP-dependent endopeptidase Lon compare
CCNA_02004 +1.4 2.2 SOS-induced inhibitor of cell division SidA compare
CCNA_00992 +1.4 8.7 hypothetical protein compare
CCNA_03518 +1.4 9.1 cytochrome c oxidase polypeptide II coxB compare
CCNA_02030 +1.3 2.3 hypothetical protein compare
CCNA_00750 +1.3 8.8 FeaR-family transcriptional regulator compare
CCNA_01184 +1.3 7.0 MutT/nudix family hydrolase compare
CCNA_03515 +1.3 5.6 hypothetical protein compare
CCNA_02878 +1.3 1.3 hypothetical protein compare
CCNA_00507 +1.3 5.3 cytochrome c1 compare
CCNA_01813 +1.3 6.4 tRNA-dihydrouridine synthase compare
CCNA_03936 +1.3 3.3 hypothetical protein compare
CCNA_01530 +1.3 8.1 flagellin FljJ compare
CCNA_01433 +1.3 2.8 integration host factor alpha-subunit compare
CCNA_00444 +1.3 7.0 chemotaxis protein methyltransferase compare
CCNA_02125 +1.3 9.3 polar development protein podJ compare
CCNA_00442 +1.3 9.7 chemotaxis histidine kinase protein cheAI compare
CCNA_02081 +1.3 3.0 Sec-independent protein translocase protein tatB compare
CCNA_02534 +1.3 2.4 hypothetical protein compare
CCNA_01531 +1.3 9.4 acetyltransferase compare
CCNA_00352 +1.3 7.4 integral membrane protein compare
CCNA_02324 +1.3 6.9 heat shock protein 33 hsp33 compare
CCNA_02761 +1.3 4.1 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source D-Xylose in Caulobacter crescentus NA1000

For carbon source D-Xylose across organisms