Experiment set1IT001 for Sinorhizobium meliloti 1021

Compare to:

D-Glucose carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc00496 +1.3 2.4 hypothetical protein compare
SMc01765 +1.3 3.6 hypothetical protein compare
SMc00802 +1.3 1.5 hypothetical protein compare
SMc00566 +1.2 4.3 hypothetical protein compare
SM_b20701 +1.1 1.9 hypothetical protein compare
SMa1570 +1.1 3.2 PilA2 pilus assembly protein compare
SMc02280 +1.1 2.1 hypothetical protein compare
SM_b21170 +1.1 4.4 guanylate kinase compare
SMc04094 +1.1 3.0 hypothetical protein compare
SM_b20282 +1.0 2.7 spermidine/putrescine ABC transporter permease compare
SMc00647 +1.0 4.6 ribosomal large subunit pseudouridine synthase compare
SMa0450 +0.9 2.5 hypothetical protein compare
SMc01698 +0.9 6.1 oxidoreductase compare
SMc03158 +0.9 2.0 ABC transporter permease compare
SM_b20806 +0.9 3.6 hypothetical protein compare
SMc01419 +0.9 2.2 RNA polymerase sigma factor protein compare
SMc03855 +0.8 2.5 hypothetical protein compare
SMc03900 +0.8 6.0 cyclic beta-1,2-glucan ABc transporter compare
SMc02497 +0.8 2.5 hypothetical protein compare
SM_b20387 +0.8 1.3 transcriptional regulator compare
SMc00427 +0.8 2.9 peptide chain release factor RF-3 protein compare
SMc00791 +0.8 1.2 hypothetical protein compare
SMc00187 +0.8 3.1 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02495 +0.7 1.7 translaldolase compare
SMc02904 +0.7 2.1 hypothetical protein compare
SMa0833 +0.7 1.2 hypothetical protein compare
SMc03093 +0.7 1.6 hypothetical protein compare
SMc03027 +0.7 2.1 flagellar basal body rod protein FlgB compare
SM_b20403 +0.7 1.6 oxidoreductase subunit protein compare
SM_b20563 +0.7 2.6 hypothetical protein compare
SM_b20758 +0.7 1.7 ArsR family transcriptional regulator compare
SMc04382 +0.7 6.4 beta-(1,2)-glucan production associated transmembrane protein compare
SMa1210 +0.7 1.5 nitrogen fixation protein FixH compare
SMc01099 +0.7 2.4 tRNA pseudouridine synthase A compare
SMc02799 +0.6 1.5 16S rRNA methyltransferase GidB compare
SM_b21580 +0.6 1.4 hypothetical protein compare
SMc02367 +0.6 4.1 sensor histidine kinase transmembrane protein compare
SMc02366 +0.6 4.6 transcriptional regulator compare
SMc00174 +0.6 3.5 hypothetical protein compare
SM_b20896 +0.6 2.1 LysR family transcriptional regulator compare
SMc00030 +0.6 2.4 hypothetical protein compare
SMc02510 +0.6 0.7 ferric uptake regulation protein compare
SMa1053 +0.6 1.2 hypothetical protein compare
SM_b21669 +0.6 1.9 hypothetical protein compare
SMc05011 +0.6 1.9 bacteriophage DNA-binding transcription regulator compare
SM_b21084 +0.6 1.3 hypothetical protein compare
SM_b21262 +0.6 4.7 mureinpeptideoligopeptide ABC transporter permease compare
SMa0448 +0.6 1.7 hypothetical protein compare
SMa1124 +0.6 1.9 hypothetical protein compare
SM_b21687 +0.6 1.2 hypothetical protein compare
SMc03127 +0.6 1.1 ABC transporter permease compare
SM_b21475 +0.6 1.5 hypothetical protein compare
SMa0674 +0.6 1.1 hypothetical protein compare
SMa0748 +0.6 1.0 MucR family transcriptional regulator compare
SMc02719 +0.6 0.8 transposase compare
SMc03836 +0.6 1.0 acyl-CoA thioesterase i protein compare
SMc00507 +0.6 2.1 hypothetical protein compare
SMc02941 +0.6 2.0 hypothetical protein compare
SM_b20547 +0.5 1.7 hypothetical protein compare
SMc00877 +0.5 3.6 transcriptional regulator compare
SMc01153 +0.5 0.9 enoyl-CoA hydratase compare
SMc01410 +0.5 1.5 lipoprotein transmembrane compare
SMa1639 +0.5 1.0 hypothetical protein compare
SMc00418 +0.5 1.7 hypothetical protein compare
SMc01275 +0.5 3.4 ribosomal large subunit pseudouridine synthase C protein compare
SM_b20343 +0.5 1.5 isoquinoline 1-oxidoreductase compare
SMc00794 +0.5 3.3 two-component response regulator compare
SMc03281 +0.5 2.7 transposase compare
SM_b20803 +0.5 1.6 3-deoxy-manno-octulosonate cytidylyltransferase compare
SMc00800 +0.5 1.1 hypothetical protein compare
SM_b21488 +0.5 3.9 cytochrome o ubiquinol oxidase subunit I compare
SMc02077 +0.5 1.4 exodeoxyribonuclease III protein compare
SMc00458 +0.5 4.4 transcriptional regulator compare
SMc02865 +0.5 1.4 acetyltransferase compare
SMc01506 +0.5 3.3 RNA polymerase sigma factor compare
SM_b21487 +0.5 3.7 cytochrome o ubiquinol oxidase subunit II compare
SMc03124 +0.5 1.9 periplasmic binding ABC transporter protein compare
SM_b20819 +0.5 1.5 ferredoxin compare
SM_b20359 +0.5 1.7 hypothetical protein compare
SMc01204 +0.5 3.6 transmembrane oxidoreductase compare
SMc01644 +0.5 1.5 ABC transporter permease compare
SMa0995 +0.5 2.1 TRm5 transposase compare
SM_b20021 +0.5 0.7 transcriptional regulator compare
SMc00070 +0.5 1.6 signal peptide protein compare
SMc03751 +0.5 1.6 hypothetical protein compare
SMc03781 +0.5 1.8 rRNA large subunit methyltransferase compare
SMa0333 +0.5 1.3 hypothetical protein compare
SMa1136 +0.5 1.3 hypothetical protein compare
SMc00403 +0.5 3.1 NOL1/NOP2/SUN family signature protein compare
SMc02134 +0.5 2.1 hypothetical protein compare
SMc01615 +0.5 1.2 transcriptional regulator compare
SMc03801 +0.5 1.4 thioredoxin protein compare
SMc03159 +0.5 1.4 ABC transporter ATP-binding protein compare
SMc02639 +0.5 1.1 transcriptional regulator compare
SM_b20724 +0.5 1.4 hypothetical protein compare
SM_b21569 +0.5 1.4 transcriptional regulator compare
SM_b21347 +0.5 1.1 pectin degradation protein compare
SMa1371 +0.5 2.7 ABC transporter ATP-binding protein compare
SMc00239 +0.5 0.7 hypothetical protein compare
SMc01428 +0.5 1.3 cold shock transcription regulator protein compare
SMa0758 +0.5 1.5 hypothetical protein compare
SMc02328 +0.5 2.3 hypothetical protein compare
SMc00349 +0.5 2.9 GTP-binding protein LepA compare
SMc01573 +0.5 1.3 hypothetical protein compare
SMc01774 +0.5 2.1 hypothetical protein compare
SM_b20287 +0.5 1.8 hypothetical protein compare
SMc00177 +0.4 3.4 hypothetical protein compare
SMc01202 +0.4 3.0 lipoprotein compare
SMc00019 +0.4 1.5 hypothetical protein compare
SM_b20444 +0.4 1.7 hypothetical protein compare
SMa1921 +0.4 1.1 hypothetical protein compare
SM_b20411 +0.4 1.5 hypothetical protein compare
SM_b21285 +0.4 1.9 transthyretin-like protein compare
SMc00336 +0.4 2.1 hypothetical protein compare
SMc03288 +0.4 2.4 hypothetical protein compare
SMa1597 +0.4 1.8 Pilus assembly chaperone compare
SMa1913 +0.4 1.8 Na+/H+ antiporter compare
SM_b20219 +0.4 2.2 response regulator protein compare
SMc00878 +0.4 3.6 transcriptional regulator compare
SM_b20728 +0.4 1.1 hypothetical protein compare
SMc04260 +0.4 2.8 transcriptional regulator compare
SMa0187 +0.4 2.3 short chain dehydrogenase compare
SM_b20375 +0.4 1.0 transcriptional regulator compare
SMc01518 +0.4 1.6 hypothetical protein compare
SMa1188 +0.4 1.3 NosX accesory protein compare
SMa1556 +0.4 1.6 Methyl-accepting chemotaxis protein compare
SMc04881 +0.4 1.4 virulence associated protein compare
SMc03837 +0.4 2.2 ABC transporter ATP-binding protein compare
SM_b20005 +0.4 0.9 glutathione S-transferase compare
SMa1297 +0.4 1.4 hypothetical protein compare
SM_b20172 +0.4 1.9 cytochrome c protein compare
SMc03228 +0.4 1.8 YciI-like protein compare
SMc01420 +0.4 2.1 hypothetical protein compare
SM_b20098 +0.4 1.9 hypothetical protein compare
SMc02260 +0.4 1.2 ABC transporter ATP-binding protein compare
SM_b21485 +0.4 1.4 hypothetical protein compare
SMc02423 +0.4 2.2 oligopeptide transport ATP-binding ABC transporter protein compare
SMc04265 +0.4 1.6 hypothetical protein compare
SMc00175 +0.4 2.8 ABC transporter ATP-binding protein compare
SMa0087 +0.4 1.1 hypothetical protein compare
SM_b21210 +0.4 2.0 two-component response regulator protein compare
SMc00522 +0.4 2.6 ATP-dependent RNA helicase compare
SMa1245 +0.4 1.4 Crp/fnr-like transcriptional regulator compare
SMc03050 +0.4 1.1 flagellar biosynthesis regulatory protein FlaF compare
SMc03764 +0.4 1.8 DNA mismatch endonuclease, patch repair protein compare
SMc01433 +0.4 1.7 hypothetical protein compare
SM_b21271 +0.4 2.3 nucleotide-binding protein compare
SMc03176 +0.4 1.2 hypothetical protein compare
SMc02711 +0.4 2.8 hypothetical protein compare
SMc04202 +0.4 1.2 transmembrane protein compare
SM_b20805 +0.4 2.8 glycosyltransferase compare
SMa0754 +0.4 0.8 hypothetical protein compare
SMc04140 +0.4 2.3 ABC transporter ATP-binding protein compare
SMa1956 +0.4 1.9 hypothetical protein compare
SMa2087 +0.4 1.8 desulfurization enzyme compare
SMa1111 +0.4 1.9 hypothetical protein compare
SMc04882 +0.4 1.2 transcriptional regulator compare
SMc01930 +0.4 1.0 hypothetical protein compare
SMc00156 +0.4 2.5 hypothetical protein compare
SMa1361 +0.4 1.0 hypothetical protein compare
SMc02901 +0.4 0.5 hypothetical protein compare
SMc01112 +0.4 1.8 hypothetical protein compare
SMc00351 +0.4 0.5 hypothetical protein compare
SMa2211 +0.4 2.3 thiamine pyrophosphate protein compare
SMc01847 +0.4 2.1 methyltransferase compare
SMc03095 +0.4 1.8 hypothetical protein compare
SMc03210 +0.4 1.1 transcriptional regulator compare
SMc00904 +0.4 2.5 hypothetical protein compare
SMa0841 +0.4 1.8 transposase, fragment compare
SMa2169 +0.4 1.9 hypothetical protein compare
SMc02576 +0.4 0.7 acetyltransferase compare
SMc00763 +0.4 1.6 hypothetical protein compare
SMa0360 +0.4 1.6 transposase compare
SMa0417 +0.4 1.6 hypothetical protein compare
SM_b20750 +0.4 0.9 dehydrogenase compare
SMa2195 +0.4 1.7 ABC transporter ATP-binding protein compare
SMc00358 +0.4 2.5 cyclopropane-fatty-acyl-phospholipid synthase compare
SM_b20414 +0.4 0.4 hypothetical protein compare
SMc01093 +0.4 1.4 esterase compare
SMc01418 +0.4 1.6 signal peptide protein compare
SMc00994 +0.4 2.1 transcriptional regulator compare
SMc02420 +0.4 1.3 cytosine deaminase compare
SMc01349 +0.4 2.2 hypothetical protein compare
SM_b20096 +0.4 1.8 hypothetical protein compare
SM_b21308 +0.4 1.3 glycosyltransferase, forming alpha glycosyl linkages protein compare
SMc04460 +0.4 2.8 glycogen phosphorylase compare
SMc02365 +0.4 2.0 protease precursor protein compare
SMc04400 +0.4 1.8 oxidoreductase compare
SMc00116 +0.4 2.2 hypothetical protein compare
SM_b21263 +0.4 2.6 mureinpeptideoligopeptide ABC transporter permease compare
SM_b21310 +0.4 1.7 hypothetical protein compare
SMc02389 +0.4 1.9 hypothetical protein compare
SMc04186 +0.4 1.5 hypothetical protein compare
SMc03008 +0.4 0.6 chemotaxis protein compare
SMc01907 +0.4 2.7 hypothetical protein compare
SMc03037 +0.3 1.1 flagellin A compare
SMc00176 +0.3 1.8 hypothetical protein compare
SMc00061 +0.3 1.4 hypothetical protein compare
SMa0583 +0.3 1.5 nitrate ABC transporter permease compare
SMc04406 +0.3 1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in carbon source experiments

For carbon source D-Glucose across organisms