Experiment set1H9 for Dechlorosoma suillum PS

Compare to:

rich media with sodium chlorite 0.16 mM

200 most important genes:

  gene name fitness t score description  
Dsui_1321 -5.1 -7.0 ABC-type uncharacterized transport system, permease component compare
Dsui_1653 -4.3 -6.6 ferrous iron transporter FeoB compare
Dsui_3457 -3.5 -2.4 K+ transporter compare
Dsui_3081 -3.3 -2.3 chaperone protein DnaK compare
Dsui_1652 -3.1 -2.1 FeoA-like protein compare
Dsui_1304 -3.1 -3.9 cytochrome c553 compare
Dsui_1970 -2.8 -5.0 metalloendopeptidase-like membrane protein compare
Dsui_3523 -2.7 -4.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0469 -2.7 -2.5 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2981 -2.6 -1.8 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_3521 -2.6 -6.4 membrane-fusion protein compare
Dsui_3080 -2.5 -1.9 molecular chaperone GrpE (heat shock protein) compare
Dsui_3224 -2.5 -2.9 pterin-4a-carbinolamine dehydratase compare
Dsui_3520 -2.1 -11.3 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1578 -2.0 -4.8 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3524 -2.0 -4.7 signal transduction histidine kinase compare
Dsui_1059 -2.0 -2.3 thiamine monophosphate synthase compare
Dsui_1827 -2.0 -1.7 hypothetical protein compare
Dsui_3220 -1.9 -2.2 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_2560 -1.9 -3.1 zonula occludens toxin compare
Dsui_1529 -1.8 -3.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0099 -1.8 -2.8 putative periplasmic or secreted lipoprotein compare
Dsui_0007 -1.7 -2.0 cold shock protein compare
Dsui_0153 -1.6 -15.5 cupin domain-containing protein compare
Dsui_1947 -1.6 -1.4 nucleotide sugar dehydrogenase compare
Dsui_2752 -1.5 -2.0 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_0434 -1.5 -2.8 ribonuclease, Rne/Rng family compare
Dsui_0500 -1.4 -3.5 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_2187 -1.4 -2.6 acyl-CoA synthetase/AMP-acid ligase compare
Dsui_1577 -1.4 -1.3 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_2617 -1.4 -1.8 DNA recombination-dependent growth factor C compare
Dsui_2562 -1.4 -2.0 hypothetical protein compare
Dsui_0685 -1.3 -1.8 glutathione S-transferase compare
Dsui_3054 -1.3 -1.7 phosphate ABC transporter, permease protein PstA compare
Dsui_2694 -1.3 -1.9 ribosomal protein S2 compare
Dsui_2609 -1.3 -2.9 hypothetical protein compare
Dsui_1037 -1.2 -1.2 ribosomal protein L25, Ctc-form compare
Dsui_2295 -1.2 -1.8 transcriptional regulator compare
Dsui_2220 -1.2 -1.3 hypothetical protein compare
Dsui_2355 -1.2 -1.7 cytochrome B561 compare
Dsui_2402 -1.2 -1.1 hypothetical protein compare
Dsui_1591 -1.1 -1.6 Xaa-Pro aminopeptidase compare
Dsui_2673 -1.1 -1.6 hypothetical protein compare
Dsui_2556 -1.1 -3.0 hypothetical protein compare
Dsui_2189 -1.1 -2.4 acyl-CoA synthetase (NDP forming) compare
Dsui_3139 -1.1 -2.2 outer membrane assembly lipoprotein YfgL compare
Dsui_0292 -1.1 -2.2 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_2586 -1.1 -2.9 type IV secretory pathway, VirB9 component compare
Dsui_1855 -1.1 -1.7 hypothetical protein compare
Dsui_2094 -1.0 -2.2 putative autotransporter protein compare
Dsui_2398 -1.0 -2.1 hypothetical protein compare
Dsui_2304 -1.0 -3.4 electron transfer flavoprotein, alpha subunit compare
Dsui_0401 -1.0 -1.5 nucleoside-diphosphate-sugar epimerase compare
Dsui_2306 -1.0 -1.9 transcriptional regulator compare
Dsui_3240 -1.0 -4.7 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_2604 -1.0 -1.9 hypothetical protein compare
Dsui_2601 -1.0 -2.7 hypothetical protein compare
Dsui_2816 -1.0 -2.5 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_2599 -1.0 -1.6 hypothetical protein compare
Dsui_1402 -1.0 -2.5 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_2631 -0.9 -2.7 hypothetical protein compare
Dsui_2606 -0.9 -2.4 soluble lytic murein transglycosylase-like protein compare
Dsui_2640 -0.9 -3.0 Cytochrome c compare
Dsui_2607 -0.9 -1.7 hypothetical protein compare
Dsui_2269 -0.9 -2.5 SOS regulatory protein LexA compare
Dsui_1325 -0.9 -1.8 ADP-ribose pyrophosphatase compare
Dsui_3431 -0.9 -2.3 Protein of unknown function (DUF3240) compare
Dsui_3467 -0.9 -1.7 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_1897 -0.9 -1.6 hypothetical protein compare
Dsui_0507 -0.9 -2.4 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_0398 -0.9 -3.6 UDP-glucose-4-epimerase compare
Dsui_0660 -0.9 -2.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0543 -0.9 -3.1 malic enzyme compare
Dsui_0015 -0.9 -1.2 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_2230 -0.8 -1.0 conserved hypothetical integral membrane protein compare
Dsui_0990 -0.8 -0.6 putative P-loop-containing kinase compare
Dsui_0477 -0.8 -2.1 tol-pal system protein YbgF compare
Dsui_2846 -0.8 -4.8 ATPase compare
Dsui_2196 -0.8 -1.9 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_1553 -0.8 -1.8 regulator of competence-specific genes compare
Dsui_2555 -0.8 -1.4 Bacteriophage coat protein B compare
Dsui_2301 -0.8 -4.0 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1025 -0.8 -2.6 putative Zn-dependent peptidase compare
Dsui_3327 -0.8 -1.0 cytochrome b compare
Dsui_1451 -0.8 -1.5 FHA domain-containing protein compare
Dsui_2567 -0.8 -6.6 hypothetical protein compare
Dsui_0175 -0.8 -1.5 hypothetical protein compare
Dsui_2867 -0.8 -1.5 surface antigen family protein compare
Dsui_2826 -0.8 -1.4 hypothetical protein compare
Dsui_2615 -0.8 -3.0 hypothetical protein compare
Dsui_2703 -0.8 -1.9 chromosome segregation protein SMC compare
Dsui_1002 -0.8 -1.3 prolyl oligopeptidase family protein compare
Dsui_2593 -0.8 -3.6 PilS N terminal protein compare
Dsui_2632 -0.8 -1.4 hypothetical protein compare
Dsui_0540 -0.8 -1.5 L-threonine-O-3-phosphate decarboxylase compare
Dsui_2612 -0.8 -2.5 hypothetical protein compare
Dsui_0215 -0.7 -1.4 hypothetical protein compare
Dsui_1275 -0.7 -1.5 protein-export chaperone SecB compare
Dsui_0004 -0.7 -3.1 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_1084 -0.7 -4.8 bacteriophage protein gp37 compare
Dsui_2783 -0.7 -1.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0850 -0.7 -3.2 hypothetical protein compare
Dsui_3415 -0.7 -3.5 FAD/FMN-dependent dehydrogenase compare
Dsui_2275 -0.7 -2.0 putative transcriptional regulator compare
Dsui_2198 -0.7 -3.0 ATP-dependent protease La compare
Dsui_2842 -0.7 -2.1 radical SAM pair-associated protein compare
Dsui_3484 -0.7 -0.9 putative permease compare
Dsui_0687 -0.7 -1.4 Protein of unknown function (DUF2905) compare
Dsui_1060 -0.7 -2.2 putative ATPase (AAA+ superfamily) compare
Dsui_2533 -0.7 -1.5 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_3375 -0.7 -0.7 hypothetical protein compare
Dsui_1955 -0.7 -2.0 3'-5' exonuclease compare
Dsui_2199 -0.7 -1.1 bacterial nucleoid DNA-binding protein compare
Dsui_0255 -0.7 -0.8 hypothetical protein compare
Dsui_2589 -0.7 -3.2 type II secretory pathway, component PulD compare
Dsui_2781 -0.7 -1.4 PAS domain S-box compare
Dsui_2153 -0.7 -2.2 molybdopterin converting factor, subunit 1 compare
Dsui_2300 -0.7 -2.4 hypothetical protein compare
Dsui_2298 -0.7 -1.9 putative thioesterase compare
Dsui_1797 -0.7 -2.4 putative phage-type endonuclease compare
Dsui_0259 -0.7 -2.6 sulfate ABC transporter, permease protein CysW compare
Dsui_1682 -0.7 -1.3 biopolymer transport protein compare
Dsui_1845 -0.7 -1.8 phosphate/sulfate permease compare
Dsui_1495 -0.7 -1.4 molecular chaperone (small heat shock protein) compare
Dsui_1316 -0.7 -2.1 hypothetical protein compare
Dsui_0554 -0.7 -1.6 uncharacterized conserved small protein containing a coiled-coil domain compare
Dsui_0585 -0.7 -2.5 ABC-type metal ion transport system, periplasmic component/surface adhesin compare
Dsui_2614 -0.7 -1.8 hypothetical protein compare
Dsui_2454 -0.7 -1.8 Positive regulator of sigma E activity compare
Dsui_2305 -0.6 -3.2 electron transfer flavoprotein, beta subunit compare
Dsui_0421 -0.6 -2.1 carbonic anhydrase compare
Dsui_0569 -0.6 -1.2 hypothetical protein compare
Dsui_0657 -0.6 -3.4 methyl-accepting chemotaxis protein compare
Dsui_0003 -0.6 -2.0 putative Zn-dependent protease compare
Dsui_0992 -0.6 -0.9 putative membrane protein compare
Dsui_0520 -0.6 -3.7 transcriptional regulator compare
Dsui_1605 -0.6 -1.6 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2600 -0.6 -1.6 hypothetical protein compare
Dsui_0704 -0.6 -3.7 RNA polymerase sigma-54 factor compare
Dsui_1465 -0.6 -2.3 hypothetical protein compare
Dsui_1235 -0.6 -1.2 hypothetical protein compare
Dsui_2097 -0.6 -1.5 putative phosphohydrolase compare
Dsui_1381 -0.6 -0.6 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_3239 -0.6 -3.5 acetyl-CoA acetyltransferase compare
Dsui_2905 -0.6 -1.9 flagellin/flagellar hook associated protein compare
Dsui_1032 -0.6 -2.4 Flp pilus assembly protein TadD compare
Dsui_1830 -0.6 -1.1 Yip1 domain protein compare
Dsui_1175 -0.6 -2.5 cytochrome c-type biogenesis protein CcmI compare
Dsui_3231 -0.6 -1.9 hypothetical protein compare
Dsui_3030 -0.6 -3.1 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit compare
Dsui_1581 -0.6 -1.1 response regulator compare
Dsui_2101 -0.6 -1.9 hypothetical protein compare
Dsui_0042 -0.6 -0.9 Protein of unknown function (DUF2892) compare
Dsui_1525 -0.6 -3.4 sulfate/thiosulfate-binding protein compare
Dsui_2162 -0.6 -2.1 hypothetical protein compare
Dsui_1579 -0.6 -3.2 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0471 -0.6 -1.0 cobalamin 5''-phosphate synthase/cobalamin synthase compare
Dsui_2559 -0.6 -1.6 Protein of unknown function (DUF2523) compare
Dsui_0859 -0.6 -0.8 hypothetical protein compare
Dsui_3382 -0.6 -1.6 universal stress protein UspA-like protein compare
Dsui_2154 -0.6 -1.7 molybdopterin converting factor, large subunit compare
Dsui_2240 -0.6 -1.7 PAS domain S-box compare
Dsui_3118 -0.6 -1.3 polyferredoxin compare
Dsui_2352 -0.6 -1.2 hypothetical protein compare
Dsui_0641 -0.6 -1.6 putative rRNA methylase compare
Dsui_1582 -0.6 -2.7 Fe-S oxidoreductase compare
Dsui_2443 -0.6 -0.9 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_0703 -0.6 -2.6 ribosomal subunit interface protein compare
Dsui_3532 -0.6 -2.2 Protein of unknown function (DUF3106) compare
Dsui_2123 -0.6 -1.0 EAL domain-containing protein compare
Dsui_2919 -0.6 -1.0 addiction module antidote protein, HigA family compare
Dsui_0505 -0.6 -3.1 7-cyano-7-deazaguanine reductase compare
Dsui_0600 -0.6 -0.6 TIGR00251 family protein compare
Dsui_2823 -0.6 -1.5 DNA internalization-related competence protein ComEC/Rec2 compare
Dsui_3323 -0.6 -1.6 tRNA-guanine transglycosylase, queuosine-34-forming compare
Dsui_2031 -0.5 -0.9 putative thioesterase compare
Dsui_0862 -0.5 -1.0 hypothetical protein compare
Dsui_2928 -0.5 -2.2 ABC-type Fe3+ transport system, periplasmic component compare
Dsui_2843 -0.5 -4.4 hypothetical protein compare
Dsui_2086 -0.5 -1.1 cytochrome c compare
Dsui_1590 -0.5 -0.9 hypothetical protein compare
Dsui_1606 -0.5 -1.4 periplasmic serine protease, Do/DeqQ family compare
Dsui_1675 -0.5 -1.2 hypothetical protein compare
Dsui_1251 -0.5 -0.9 acylphosphatase compare
Dsui_1534 -0.5 -0.6 ribosomal protein L33 compare
Dsui_0454 -0.5 -0.7 hypothetical protein compare
Dsui_1445 -0.5 -1.6 succinyl-CoA synthetase, beta subunit compare
Dsui_3156 -0.5 -1.3 putative permease compare
Dsui_2102 -0.5 -1.3 hypothetical protein compare
Dsui_0156 -0.5 -4.1 thiosulfate reductase cytochrome B subunit (membrane anchoring protein) compare
Dsui_0901 -0.5 -2.1 hypothetical protein compare
Dsui_2561 -0.5 -2.5 type II secretory pathway, component PulD compare
Dsui_2634 -0.5 -2.1 cytochrome c, mono- and diheme variants family compare
Dsui_1165 -0.5 -1.3 Ni,Fe-hydrogenase I large subunit compare
Dsui_3115 -0.5 -1.9 hypothetical protein compare
Dsui_1759 -0.5 -1.0 flagellar hook-basal body complex protein FliE compare
Dsui_1515 -0.5 -1.3 poly(A) polymerase compare
Dsui_2095 -0.5 -1.3 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_1915 -0.5 -1.2 cytochrome bd-type quinol oxidase, subunit 1 compare
Dsui_2923 -0.5 -2.6 esterase/lipase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chlorite in Dechlorosoma suillum PS

For stress Sodium Chlorite across organisms