Experiment set1H7 for Dechlorosoma suillum PS

Compare to:

rich media with hydrogen peroxide 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2158 +1.1 1.9 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_0202 +1.0 2.4 hypothetical protein compare
Dsui_0395 +1.0 1.2 outer membrane lipoprotein compare
Dsui_1875 +1.0 2.7 hypothetical protein compare
Dsui_1615 +0.9 1.3 hypothetical protein compare
Dsui_0609 +0.8 3.8 2-polyprenylphenol hydroxylase-like oxidoreductase compare
Dsui_2995 +0.8 2.8 hypothetical protein compare
Dsui_1652 +0.7 1.9 FeoA-like protein compare
Dsui_2331 +0.7 1.9 heat shock protein compare
Dsui_2268 +0.7 2.5 putative lactoylglutathione lyase compare
Dsui_0624 +0.7 2.5 hypothetical protein compare
Dsui_1901 +0.7 4.5 peroxiredoxin compare
Dsui_2259 +0.7 1.0 hypothetical protein compare
Dsui_2400 +0.7 3.1 signal transduction histidine kinase compare
Dsui_0417 +0.7 2.1 gamma-glutamyltransferase compare
Dsui_2744 +0.7 1.8 Protein of unknown function (DUF1236) compare
Dsui_2476 +0.7 1.5 hypothetical protein compare
Dsui_2948 +0.6 1.8 RNA polymerase sigma factor, sigma-70 family compare
Dsui_0533 +0.6 2.1 cobyrinic acid a,c-diamide synthase compare
Dsui_2956 +0.6 1.6 ABC-type cobalt transport system, periplasmic component compare
Dsui_1170 +0.6 0.9 heme exporter protein CcmD compare
Dsui_2138 +0.6 2.2 putative esterase compare
Dsui_2191 +0.6 1.5 squalene-associated FAD-dependent desaturase compare
Dsui_3206 +0.6 1.6 putative metal-binding protein compare
Dsui_3411 +0.6 2.6 hypothetical protein compare
Dsui_3102 +0.6 1.6 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_2401 +0.6 2.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2771 +0.6 2.7 hypothetical protein compare
Dsui_1713 +0.6 2.6 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain compare
Dsui_2884 +0.6 1.6 dethiobiotin synthase compare
Dsui_2426 +0.6 2.4 hypothetical protein compare
Dsui_1687 +0.6 1.6 nitrogen regulatory protein PII compare
Dsui_1248 +0.6 0.9 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase compare
Dsui_2705 +0.5 2.3 permease compare
Dsui_1879 +0.5 1.6 luciferase family oxidoreductase, group 1 compare
Dsui_1832 +0.5 2.3 nitrate ABC transporter, permease protein compare
Dsui_2045 +0.5 1.8 hypothetical protein compare
Dsui_0598 +0.5 1.8 hypothetical protein compare
Dsui_0102 +0.5 1.5 transcription elongation factor compare
Dsui_0271 +0.5 1.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0926 +0.5 3.6 fumarate hydratase, class II compare
Dsui_2503 +0.5 1.8 Mu transposase/integrase compare
Dsui_0966 +0.5 2.5 methyl-accepting chemotaxis protein compare
Dsui_1149 +0.5 1.5 Zn-dependent protease with chaperone function compare
Dsui_3149 +0.5 1.6 electron transfer flavoprotein, alpha subunit compare
Dsui_1653 +0.5 2.9 ferrous iron transporter FeoB compare
Dsui_1458 +0.5 1.7 phosphohistidine phosphatase SixA compare
Dsui_2377 +0.5 1.8 FeS assembly protein IscX compare
Dsui_1821 +0.5 1.7 esterase/lipase compare
Dsui_0871 +0.5 1.1 hypothetical protein compare
Dsui_2025 +0.5 2.0 RND family efflux transporter, MFP subunit compare
Dsui_0567 +0.5 1.3 molybdenum-pterin binding domain protein compare
Dsui_0726 +0.5 2.1 ferredoxin compare
Dsui_2659 +0.5 3.2 cold shock protein compare
Dsui_3069 +0.5 1.4 putative membrane protein compare
Dsui_0947 +0.5 1.5 hypothetical protein compare
Dsui_0201 +0.5 2.3 hypothetical protein compare
Dsui_2713 +0.5 2.6 membrane protease subunit, stomatin/prohibitin compare
Dsui_3419 +0.5 2.2 transcriptional regulator compare
Dsui_1022 +0.5 3.0 cell division protein compare
Dsui_1675 +0.5 1.4 hypothetical protein compare
Dsui_1883 +0.5 2.4 ATPase component of ABC transporters with duplicated ATPase domain compare
Dsui_1916 +0.5 1.8 cytochrome d oxidase cyd, subunit II compare
Dsui_2699 +0.5 2.3 hypoxanthine-guanine phosphoribosyltransferase compare
Dsui_2756 +0.5 0.8 hypothetical protein compare
Dsui_2230 +0.5 1.8 conserved hypothetical integral membrane protein compare
Dsui_2732 +0.5 2.3 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_1888 +0.5 1.4 putative domain HDIG-containing protein compare
Dsui_2730 +0.4 1.7 Sua5/YciO/YrdC/YwlC family protein compare
Dsui_0996 +0.4 1.7 soluble lytic murein transglycosylase-like protein compare
Dsui_2738 +0.4 1.4 glycine cleavage system regulatory protein compare
Dsui_2154 +0.4 2.0 molybdopterin converting factor, large subunit compare
Dsui_2143 +0.4 1.5 hypothetical protein compare
Dsui_1629 +0.4 1.0 Cbb3-type cytochrome oxidase, subunit 3 compare
Dsui_3377 +0.4 1.4 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_1660 +0.4 2.8 outer membrane cobalamin receptor protein compare
Dsui_2809 +0.4 1.1 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_0675 +0.4 1.0 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_2672 +0.4 3.1 hypothetical protein compare
Dsui_1045 +0.4 2.1 hypothetical protein compare
Dsui_2495 +0.4 2.3 mercuric transport protein periplasmic component compare
Dsui_0527 +0.4 1.7 hypothetical protein compare
Dsui_3022 +0.4 1.2 hypothetical protein compare
Dsui_2888 +0.4 1.7 stress-induced morphogen compare
Dsui_1442 +0.4 1.2 putative efflux protein, MATE family compare
Dsui_0308 +0.4 1.3 Major Facilitator Superfamily transporter compare
Dsui_0538 +0.4 0.8 hypothetical protein compare
Dsui_1232 +0.4 2.8 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_2761 +0.4 1.3 hypothetical protein compare
Dsui_0528 +0.4 1.3 hypothetical protein compare
Dsui_0134 +0.4 2.1 negative regulator of beta-lactamase expression compare
Dsui_2480 +0.4 2.6 nitrous oxidase accessory protein compare
Dsui_2181 +0.4 1.6 DNA-binding domain-containing protein, AraC-type compare
Dsui_1704 +0.4 2.8 flagellar motor stator protein MotA compare
Dsui_3224 +0.4 1.0 pterin-4a-carbinolamine dehydratase compare
Dsui_2522 +0.4 1.7 hypothetical protein compare
Dsui_2231 +0.4 2.2 arabinose efflux permease family protein compare
Dsui_0964 +0.4 1.0 putative lipid carrier protein compare
Dsui_3464 +0.4 1.3 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Dsui_2819 +0.4 1.4 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_3422 +0.4 1.9 hemerythrin-like metal-binding domain-containing protein compare
Dsui_2669 +0.4 2.7 ankyrin repeat-containing protein compare
Dsui_3007 +0.4 1.0 hydrogenase assembly chaperone HypC/HupF compare
Dsui_0433 +0.4 1.9 collagenase-like protease compare
Dsui_0995 +0.4 2.2 arabinose efflux permease family protein compare
Dsui_2664 +0.4 2.3 hypothetical protein compare
Dsui_2326 +0.4 0.6 hypothetical protein compare
Dsui_2751 +0.4 3.2 cyanophycin synthetase compare
Dsui_2679 +0.4 1.9 rRNA methylase compare
Dsui_2465 +0.4 1.6 beta-glucosidase-like glycosyl hydrolase compare
Dsui_1377 +0.4 1.0 phasin family protein compare
Dsui_2656 +0.4 2.1 conserved hypothetical protein, YceG family compare
Dsui_2000 +0.4 2.7 hypothetical protein compare
Dsui_1613 +0.4 1.7 cytochrome c553 compare
Dsui_1664 +0.4 0.9 putative periplasmic protein compare
Dsui_2750 +0.4 2.6 cyanophycin synthetase compare
Dsui_2455 +0.4 3.0 periplasmic serine protease, Do/DeqQ family compare
Dsui_0035 +0.4 2.2 ankyrin repeat-containing protein compare
Dsui_1829 +0.4 1.1 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1926 +0.4 2.1 acetolactate synthase, small (regulatory) subunit compare
Dsui_2484 +0.4 1.2 hydroxyacylglutathione hydrolase compare
Dsui_1273 +0.4 0.9 Rhodanese-related sulfurtransferase compare
Dsui_2044 +0.4 1.3 Rhodanese-related sulfurtransferase compare
Dsui_2493 +0.4 2.3 Hg(II)-responsive transcriptional regulator compare
Dsui_1269 +0.4 1.6 hypothetical protein compare
Dsui_2334 +0.4 2.0 tRNA-dihydrouridine synthase compare
Dsui_1651 +0.4 2.0 copper chaperone compare
Dsui_2960 +0.4 2.2 hypothetical protein compare
Dsui_1712 +0.4 1.9 chemotaxis protein compare
Dsui_2653 +0.4 1.2 Tfp pilus assembly protein PilZ compare
Dsui_1037 +0.4 0.5 ribosomal protein L25, Ctc-form compare
Dsui_1353 +0.4 1.7 flagellar capping protein compare
Dsui_1412 +0.4 1.2 chromate transport protein ChrA compare
Dsui_0106 +0.4 1.3 hypothetical protein compare
Dsui_0946 +0.4 0.7 putative nitrogen fixation protein FixT compare
Dsui_3101 +0.4 1.8 transcriptional regulator compare
Dsui_2973 +0.3 1.0 putative arginyl-tRNA:protein arginylyltransferase compare
Dsui_1716 +0.3 2.6 methyl-accepting chemotaxis protein compare
Dsui_2866 +0.3 1.5 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_0470 +0.3 1.3 fructose-2,6-bisphosphatase compare
Dsui_0557 +0.3 1.0 NifQ compare
Dsui_1838 +0.3 2.0 spermidine synthase compare
Dsui_2536 +0.3 1.9 hypothetical protein compare
Dsui_1264 +0.3 1.7 fructose-2,6-bisphosphatase compare
Dsui_1580 +0.3 2.4 PAS domain S-box compare
Dsui_2742 +0.3 2.1 molecular chaperone compare
Dsui_2736 +0.3 1.8 glycine cleavage system H protein compare
Dsui_1897 +0.3 0.8 hypothetical protein compare
Dsui_3126 +0.3 2.1 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_1714 +0.3 1.8 anti-anti-sigma factor compare
Dsui_0421 +0.3 1.6 carbonic anhydrase compare
Dsui_1707 +0.3 2.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2527 +0.3 2.6 transposase, TnpA family compare
Dsui_0938 +0.3 1.5 HD-GYP domain-containing protein compare
Dsui_1710 +0.3 2.8 PAS domain S-box compare
Dsui_1166 +0.3 2.1 cytochrome c peroxidase compare
Dsui_2456 +0.3 2.4 Glutaredoxin-like domain (DUF836) compare
Dsui_0315 +0.3 1.3 Protein of unknown function (DUF2802) compare
Dsui_3169 +0.3 0.9 putative metal-binding protein compare
Dsui_2077 +0.3 1.6 cAMP-binding protein compare
Dsui_0539 +0.3 1.2 ABC-type Fe3+-hydroxamate transport system, periplasmic component compare
Dsui_2697 +0.3 1.7 peptide deformylase compare
Dsui_1873 +0.3 1.2 transcriptional regulator compare
Dsui_2380 +0.3 1.4 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase compare
Dsui_1588 +0.3 2.3 aminoglycoside phosphotransferase compare
Dsui_2539 +0.3 1.2 polyhydroxyalkanoate synthesis repressor PhaR compare
Dsui_2389 +0.3 1.1 putative membrane protein compare
Dsui_1541 +0.3 1.5 cytochrome c553 compare
Dsui_0003 +0.3 1.1 putative Zn-dependent protease compare
Dsui_2975 +0.3 1.7 TonB-dependent siderophore receptor compare
Dsui_2802 +0.3 1.3 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Dsui_3091 +0.3 2.1 integral membrane protein, TerC family compare
Dsui_2272 +0.3 1.0 hypothetical protein compare
Dsui_1850 +0.3 1.7 putative transcriptional regulator compare
Dsui_0429 +0.3 1.2 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_0317 +0.3 2.1 acetyl-CoA acetyltransferase compare
Dsui_2658 +0.3 1.5 hypothetical protein compare
Dsui_0045 +0.3 1.3 glutaredoxin-like protein compare
Dsui_3361 +0.3 1.2 hypothetical protein compare
Dsui_2479 +0.3 1.4 hypothetical protein compare
Dsui_2883 +0.3 1.2 biotin biosynthesis protein BioC compare
Dsui_0709 +0.3 1.8 bacterioferritin compare
Dsui_3459 +0.3 1.4 septum site-determining protein MinD compare
Dsui_2970 +0.3 1.0 putative Fe-S oxidoreductase compare
Dsui_0214 +0.3 1.0 TIGR02594 family protein compare
Dsui_3271 +0.3 1.5 ATP-dependent protease Clp, ATPase subunit compare
Dsui_0862 +0.3 0.8 hypothetical protein compare
Dsui_2497 +0.3 1.6 mercuric reductase compare
Dsui_3374 +0.3 1.0 cyclic nucleotide-binding protein compare
Dsui_2652 +0.3 1.1 hydrolase, TatD family compare
Dsui_1543 +0.3 1.6 tRNA/rRNA cytosine-C5-methylase compare
Dsui_1147 +0.3 1.8 PAS domain S-box compare
Dsui_2869 +0.3 1.3 transcriptional regulator compare
Dsui_0582 +0.3 1.6 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Dsui_1911 +0.3 1.3 ParB-like partition protein compare
Dsui_2959 +0.3 1.4 precorrin-4 C11-methyltransferase compare
Dsui_3462 +0.3 1.4 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component compare
Dsui_0700 +0.3 0.9 psiF repeat protein compare
Dsui_2927 +0.3 0.6 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_1237 +0.3 1.9 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Hydrogen peroxide in Dechlorosoma suillum PS

For stress Hydrogen peroxide across organisms