Experiment set1H7 for Shewanella oneidensis MR-1

Compare to:

LB with sodium fluoride 50 mM

Group: stress
Media: LB + sodium fluoride (50 mM)
Culturing: MR1_ML3, 48 well microplate; Tecan Infinite F200, Aerobic, at 30 (C), shaken=orbital
By: Adam on 8/18/2013
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 647 C5,C6

Specific Phenotypes

For 2 genes in this experiment

For stress sodium fluoride in Shewanella oneidensis MR-1

For stress sodium fluoride across organisms

SEED Subsystems

Subsystem #Specific
Nudix proteins (nucleoside triphosphate hydrolases) 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
pyrimidine deoxyribonucleotides dephosphorylation 3 1 1
pyrimidine deoxyribonucleotides de novo biosynthesis II 7 7 1
pyrimidine deoxyribonucleotides de novo biosynthesis I 9 9 1
pyrimidine deoxyribonucleotides de novo biosynthesis III 9 8 1
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) 14 14 1
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis 18 18 1