Experiment set1H19 for Dinoroseobacter shibae DFL-12
marine broth with Sodium Chlorate 40 mM
Group: stressMedia: marine_broth_2216 + Sodium Chlorate (40 mM)
Culturing: Dino_ML3, 48 well microplate; Tecan Infinite F200, Aerobic, at 26 (C), shaken=orbital
By: Jordan on 8/16/2013
Media components: 5 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.1 g/L Ferric citrate, 19.45 g/L Sodium Chloride, 5.9 g/L Magnesium chloride hexahydrate, 3.24 g/L Magnesium sulfate, 1.8 g/L Calcium chloride, 0.55 g/L Potassium Chloride, 0.16 g/L Sodium bicarbonate, 0.08 g/L Potassium bromide, 34 mg/L Strontium chloride, 22 mg/L Boric Acid, 4 mg/L Sodium metasilicate, 2.4 mg/L sodium fluoride, 8 mg/L Disodium phosphate
Growth plate: 642 C7,C8
Specific Phenotypes
For 16 genes in this experiment
For stress Sodium Chlorate in Dinoroseobacter shibae DFL-12
For stress Sodium Chlorate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Valine, leucine and isoleucine biosynthesis
- Biosynthesis of alkaloids derived from histidine and purine
- Glycolysis / Gluconeogenesis
- Citrate cycle (TCA cycle)
- Lysine degradation
- Pyruvate metabolism
- Butanoate metabolism
- Biosynthesis of phenylpropanoids
- Biosynthesis of terpenoids and steroids
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
- Biosynthesis of alkaloids derived from terpenoid and polyketide
- Biosynthesis of plant hormones
- T cell receptor signaling pathway
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: