Experiment set1H17 for Dechlorosoma suillum PS

Compare to:

defined media with 40 mM sodium acetate

200 most important genes:

  gene name fitness t score description  
Dsui_0011 -4.1 -12.0 isocitrate lyase compare
Dsui_0019 -4.1 -8.2 malate synthase A compare
Dsui_3081 -3.3 -2.3 chaperone protein DnaK compare
Dsui_0007 -2.8 -2.3 cold shock protein compare
Dsui_2981 -2.6 -1.8 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_3080 -2.6 -2.0 molecular chaperone GrpE (heat shock protein) compare
Dsui_2610 -2.2 -3.2 single-stranded DNA-binding protein compare
Dsui_0127 -2.2 -7.3 transcriptional regulator compare
Dsui_1097 -2.1 -4.2 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_0016 -2.1 -7.8 transcriptional regulator conserved
Dsui_2606 -2.0 -2.9 soluble lytic murein transglycosylase-like protein compare
Dsui_0747 -2.0 -3.6 glutamate--cysteine ligase compare
Dsui_2560 -1.9 -3.2 zonula occludens toxin compare
Dsui_1004 -1.8 -1.2 conserved protein of DIM6/NTAB family compare
Dsui_2908 -1.7 -4.7 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0859 -1.7 -2.1 hypothetical protein compare
Dsui_0744 -1.7 -3.0 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_1925 -1.7 -7.6 acetolactate synthase, large subunit, biosynthetic type compare
Dsui_1096 -1.6 -8.7 glutamate synthase family protein compare
Dsui_2433 -1.6 -6.5 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0850 -1.6 -7.1 hypothetical protein compare
Dsui_1589 -1.6 -2.6 Nucleoside-diphosphate-sugar pyrophosphorylase family protein compare
Dsui_2368 -1.6 -3.3 serine O-acetyltransferase compare
Dsui_1827 -1.6 -1.3 hypothetical protein compare
Dsui_3366 -1.5 -2.0 glycerophosphoryl diester phosphodiesterase compare
Dsui_3224 -1.4 -1.9 pterin-4a-carbinolamine dehydratase compare
Dsui_1976 -1.4 -8.2 deacetylase, histone deacetylase/acetoin utilization protein compare
Dsui_3457 -1.4 -1.6 K+ transporter compare
Dsui_2604 -1.4 -2.5 hypothetical protein compare
Dsui_0255 -1.3 -1.2 hypothetical protein compare
Dsui_1652 -1.3 -1.7 FeoA-like protein compare
Dsui_2752 -1.3 -1.9 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_0992 -1.3 -2.0 putative membrane protein compare
Dsui_0500 -1.2 -2.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1381 -1.2 -1.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_2600 -1.2 -2.7 hypothetical protein compare
Dsui_1970 -1.2 -3.2 metalloendopeptidase-like membrane protein compare
Dsui_2921 -1.2 -2.1 isochorismate synthase family protein compare
Dsui_2221 -1.2 -3.5 putative ATPase compare
Dsui_1059 -1.2 -1.4 thiamine monophosphate synthase compare
Dsui_1248 -1.2 -1.2 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase compare
Dsui_3253 -1.2 -4.9 Protein of unknown function (DUF3579) compare
Dsui_0260 -1.1 -4.2 sulfate ABC transporter, permease protein CysT compare
Dsui_2102 -1.1 -2.5 hypothetical protein compare
Dsui_2556 -1.1 -3.1 hypothetical protein compare
Dsui_3484 -1.1 -1.2 putative permease compare
Dsui_2816 -1.1 -2.7 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_2137 -1.1 -2.1 queuosine biosynthesis protein QueD compare
Dsui_1577 -1.1 -1.2 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_2115 -1.0 -2.6 transcriptional regulator compare
Dsui_2198 -1.0 -3.9 ATP-dependent protease La compare
Dsui_2196 -1.0 -2.1 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_2902 -1.0 -1.1 hypothetical protein compare
Dsui_1994 -1.0 -1.3 NADPH-dependent FMN reductase compare
Dsui_0434 -1.0 -2.6 ribonuclease, Rne/Rng family compare
Dsui_0259 -1.0 -4.0 sulfate ABC transporter, permease protein CysW compare
Dsui_2503 -1.0 -2.0 Mu transposase/integrase compare
Dsui_1978 -1.0 -1.4 putative lipoprotein compare
Dsui_1682 -1.0 -1.9 biopolymer transport protein compare
Dsui_3054 -1.0 -1.4 phosphate ABC transporter, permease protein PstA compare
Dsui_3474 -1.0 -2.6 chemotaxis protein histidine kinase-like protein compare
Dsui_3467 -0.9 -1.7 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_0631 -0.9 -2.2 cytochrome c551/c552 compare
Dsui_1649 -0.9 -1.0 universal stress protein UspA-like protein compare
Dsui_2539 -0.9 -2.6 polyhydroxyalkanoate synthesis repressor PhaR compare
Dsui_3240 -0.9 -4.0 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0657 -0.9 -3.9 methyl-accepting chemotaxis protein compare
Dsui_2326 -0.9 -0.9 hypothetical protein compare
Dsui_0245 -0.9 -2.0 S-adenosyl-methyltransferase MraW compare
Dsui_0616 -0.9 -2.4 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_1619 -0.9 -2.6 putative membrane-associated, metal-dependent hydrolase compare
Dsui_1325 -0.8 -2.5 ADP-ribose pyrophosphatase compare
Dsui_3179 -0.8 -2.4 signal transduction histidine kinase compare
Dsui_2330 -0.8 -2.2 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3531 -0.8 -1.0 Protein of unknown function (DUF3619) compare
Dsui_0174 -0.8 -1.5 hypothetical protein compare
Dsui_1084 -0.8 -5.2 bacteriophage protein gp37 compare
Dsui_0401 -0.8 -1.3 nucleoside-diphosphate-sugar epimerase compare
Dsui_0391 -0.8 -1.4 Protein of unknown function (DUF3426) compare
Dsui_0799 -0.8 -5.8 succinate CoA transferase compare
Dsui_0258 -0.8 -2.6 sulfate ABC transporter, ATP-binding protein compare
Dsui_0740 -0.8 -3.3 methionine biosynthesis protein MetW compare
Dsui_2651 -0.8 -1.4 ankyrin repeat-containing protein compare
Dsui_2277 -0.8 -1.6 Rhs element Vgr protein compare
Dsui_0650 -0.8 -2.0 hypothetical protein compare
Dsui_0327 -0.8 -3.3 transcriptional regulator compare
Dsui_2586 -0.8 -2.3 type IV secretory pathway, VirB9 component compare
Dsui_0200 -0.8 -3.1 hypothetical protein compare
Dsui_1525 -0.8 -4.4 sulfate/thiosulfate-binding protein compare
Dsui_1835 -0.8 -2.0 glycosyltransferase compare
Dsui_2044 -0.8 -1.9 Rhodanese-related sulfurtransferase compare
Dsui_2614 -0.8 -2.1 hypothetical protein compare
Dsui_2631 -0.8 -1.8 hypothetical protein compare
Dsui_3155 -0.8 -3.9 tripartite ATP-independent periplasmic transporter solute receptor, DctP family compare
Dsui_2305 -0.8 -3.0 electron transfer flavoprotein, beta subunit compare
Dsui_2256 -0.8 -2.6 flavodoxin reductase family protein compare
Dsui_2339 -0.8 -1.7 putative domain HDIG-containing protein compare
Dsui_1401 -0.8 -2.7 surface lipoprotein compare
Dsui_2476 -0.8 -1.2 hypothetical protein compare
Dsui_1264 -0.7 -2.1 fructose-2,6-bisphosphatase compare
Dsui_2615 -0.7 -3.0 hypothetical protein compare
Dsui_0039 -0.7 -1.6 dimethyladenosine transferase compare
Dsui_2559 -0.7 -1.6 Protein of unknown function (DUF2523) compare
Dsui_0017 -0.7 -2.9 2-haloalkanoic acid dehalogenase, type II compare
Dsui_0675 -0.7 -1.3 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_0018 -0.7 -1.6 putative permease compare
Dsui_1578 -0.7 -2.5 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3368 -0.7 -1.8 hypothetical protein compare
Dsui_2123 -0.7 -1.0 EAL domain-containing protein compare
Dsui_0003 -0.7 -2.2 putative Zn-dependent protease compare
Dsui_2601 -0.7 -2.1 hypothetical protein compare
Dsui_2590 -0.7 -2.3 Pilin accessory protein (PilO) compare
Dsui_2187 -0.7 -1.2 acyl-CoA synthetase/AMP-acid ligase compare
Dsui_2964 -0.7 -2.7 precorrin-2 C20-methyltransferase compare
Dsui_3495 -0.7 -1.0 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_0725 -0.7 -1.8 putative hydrolase of the alpha/beta superfamily compare
Dsui_0539 -0.7 -2.4 ABC-type Fe3+-hydroxamate transport system, periplasmic component compare
Dsui_3220 -0.7 -0.8 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0192 -0.7 -2.0 hypothetical protein compare
Dsui_2578 -0.7 -0.9 hypothetical protein compare
Dsui_1403 -0.7 -1.5 putative NTP binding protein (contains STAS domain) compare
Dsui_2929 -0.7 -1.9 hypothetical protein compare
Dsui_2257 -0.7 -2.8 transcriptional regulator compare
Dsui_0099 -0.7 -1.3 putative periplasmic or secreted lipoprotein compare
Dsui_1859 -0.7 -2.0 hypothetical protein compare
Dsui_0499 -0.7 -1.2 DNA-directed RNA polymerase, omega subunit compare
Dsui_1459 -0.6 -2.1 hypothetical protein compare
Dsui_3382 -0.6 -1.8 universal stress protein UspA-like protein compare
Dsui_2234 -0.6 -1.8 hypothetical protein compare
Dsui_2608 -0.6 -3.3 topoisomerase IA compare
Dsui_2642 -0.6 -2.0 outer membrane protein compare
Dsui_2640 -0.6 -1.9 Cytochrome c compare
Dsui_2842 -0.6 -2.4 radical SAM pair-associated protein compare
Dsui_2748 -0.6 -1.4 hypothetical protein compare
Dsui_0469 -0.6 -1.0 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_0569 -0.6 -1.0 hypothetical protein compare
Dsui_2758 -0.6 -1.5 putative SAM-dependent methyltransferase compare
Dsui_2299 -0.6 -3.2 flavin-dependent dehydrogenase compare
Dsui_3181 -0.6 -0.6 RND family efflux transporter, MFP subunit compare
Dsui_3009 -0.6 -1.4 Ni,Fe-hydrogenase I large subunit compare
Dsui_2873 -0.6 -0.9 Peroxiredoxin compare
Dsui_2594 -0.6 -2.8 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2717 -0.6 -1.2 RNA polymerase-binding protein DksA compare
Dsui_0432 -0.6 -1.0 hypothetical protein compare
Dsui_2694 -0.6 -1.1 ribosomal protein S2 compare
Dsui_2535 -0.6 -2.0 putative divalent heavy-metal cations transporter compare
Dsui_3521 -0.6 -2.8 membrane-fusion protein compare
Dsui_2306 -0.6 -1.4 transcriptional regulator compare
Dsui_1316 -0.6 -3.1 hypothetical protein compare
Dsui_0862 -0.6 -1.0 hypothetical protein compare
Dsui_1482 -0.6 -1.8 hypothetical protein compare
Dsui_1759 -0.6 -2.7 flagellar hook-basal body complex protein FliE compare
Dsui_3231 -0.6 -2.0 hypothetical protein compare
Dsui_2457 -0.6 -2.8 GTP-binding protein LepA compare
Dsui_1352 -0.6 -2.0 acyl dehydratase compare
Dsui_3322 -0.6 -2.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
Dsui_2781 -0.6 -1.0 PAS domain S-box compare
Dsui_2757 -0.6 -1.6 spermidine synthase compare
Dsui_2676 -0.6 -0.7 putative membrane protein compare
Dsui_2240 -0.6 -1.7 PAS domain S-box compare
Dsui_2563 -0.6 -1.4 hypothetical protein compare
Dsui_2846 -0.6 -3.6 ATPase compare
Dsui_2787 -0.6 -2.0 membrane carboxypeptidase/penicillin-binding protein compare
Dsui_1855 -0.6 -1.1 hypothetical protein compare
Dsui_2603 -0.6 -2.3 hypothetical protein compare
Dsui_2300 -0.6 -2.2 hypothetical protein compare
Dsui_1465 -0.6 -2.4 hypothetical protein compare
Dsui_2086 -0.6 -1.1 cytochrome c compare
Dsui_0656 -0.6 -3.8 chemotaxis protein histidine kinase-like protein compare
Dsui_3099 -0.5 -1.4 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_2297 -0.5 -1.9 acetoacetyl-CoA synthase compare
Dsui_3030 -0.5 -2.5 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit compare
Dsui_0505 -0.5 -2.5 7-cyano-7-deazaguanine reductase compare
Dsui_0175 -0.5 -1.0 hypothetical protein compare
Dsui_0266 -0.5 -3.5 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0015 -0.5 -1.1 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_2827 -0.5 -2.2 hypothetical protein compare
Dsui_3139 -0.5 -1.6 outer membrane assembly lipoprotein YfgL compare
Dsui_2589 -0.5 -2.6 type II secretory pathway, component PulD compare
Dsui_0025 -0.5 -1.2 hypothetical protein compare
Dsui_3008 -0.5 -1.9 hydrogenase expression/formation protein compare
Dsui_3063 -0.5 -1.0 transcription elongation factor GreA compare
Dsui_1427 -0.5 -1.5 dinuclear metal center protein, YbgI/SA1388 family compare
Dsui_0608 -0.5 -2.4 nucleoside-diphosphate-sugar epimerase compare
Dsui_2823 -0.5 -1.5 DNA internalization-related competence protein ComEC/Rec2 compare
Dsui_2745 -0.5 -1.1 methyl-accepting chemotaxis protein compare
Dsui_2826 -0.5 -1.0 hypothetical protein compare
Dsui_2621 -0.5 -3.4 ATPase involved in chromosome partitioning compare
Dsui_2080 -0.5 -1.3 response regulator compare
Dsui_1488 -0.5 -2.2 putative metal-dependent hydrolase compare
Dsui_2304 -0.5 -1.9 electron transfer flavoprotein, alpha subunit compare
Dsui_2818 -0.5 -1.8 hypothetical protein compare
Dsui_1393 -0.5 -1.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0626 -0.5 -1.8 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_2687 -0.5 -2.5 RIP metalloprotease RseP compare
Dsui_2583 -0.5 -1.8 hypothetical protein compare
Dsui_0399 -0.5 -1.7 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_2027 -0.5 -1.1 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_0191 -0.5 -1.9 hypothetical protein compare
Dsui_3496 -0.5 -2.4 sulfite oxidase-like oxidoreductase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium acetate in Dechlorosoma suillum PS

For carbon source Sodium acetate across organisms