Experiment set1H17 for Dechlorosoma suillum PS

Compare to:

defined media with 40 mM sodium acetate

200 most detrimental genes:

  gene name fitness t score description  
Dsui_0990 +1.2 1.4 putative P-loop-containing kinase compare
Dsui_1314 +0.9 1.3 guanyl-specific ribonuclease Sa compare
Dsui_2401 +0.9 3.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0395 +0.8 1.7 outer membrane lipoprotein compare
Dsui_2138 +0.8 2.7 putative esterase compare
Dsui_1875 +0.8 3.0 hypothetical protein compare
Dsui_2230 +0.8 1.7 conserved hypothetical integral membrane protein compare
Dsui_2316 +0.8 1.6 hypothetical protein compare
Dsui_2697 +0.8 3.5 peptide deformylase compare
Dsui_2158 +0.7 1.4 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_0184 +0.7 2.7 putative transcriptional regulator compare
Dsui_2479 +0.7 4.0 hypothetical protein compare
Dsui_1454 +0.7 2.4 Rhodanese-like protein,cyclic nucleotide-binding protein compare
Dsui_2331 +0.7 1.4 heat shock protein compare
Dsui_3213 +0.7 2.6 CBS domain-containing protein compare
Dsui_3095 +0.6 1.3 Protein of unknown function (DUF2726) compare
Dsui_2742 +0.6 3.9 molecular chaperone compare
Dsui_0623 +0.6 2.1 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_2484 +0.6 1.9 hydroxyacylglutathione hydrolase compare
Dsui_0421 +0.6 2.6 carbonic anhydrase compare
Dsui_2695 +0.6 3.6 methionine aminopeptidase, type I compare
Dsui_1229 +0.6 2.5 Zn-dependent oxidoreductase, NADPH:quinone reductase compare
Dsui_2911 +0.6 1.4 cation/cationic drug transporter compare
Dsui_2727 +0.6 1.2 hypothetical protein compare
Dsui_3221 +0.6 2.9 cytochrome c553 compare
Dsui_2045 +0.6 2.0 hypothetical protein compare
Dsui_3429 +0.6 1.5 RND family efflux transporter, MFP subunit compare
Dsui_2702 +0.5 1.6 cell division protein compare
Dsui_2765 +0.5 2.2 putative membrane protein compare
Dsui_2426 +0.5 2.7 hypothetical protein compare
Dsui_0457 +0.5 1.2 Protein of unknown function (DUF2782) compare
Dsui_0116 +0.5 1.5 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_0306 +0.5 1.0 putative permease compare
Dsui_2877 +0.5 1.8 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_1720 +0.5 3.2 chemotaxis protein compare
Dsui_2395 +0.5 2.3 hypothetical protein compare
Dsui_0927 +0.5 2.6 cytochrome c551/c552 compare
Dsui_1892 +0.5 2.2 transcriptional regulator compare
Dsui_2667 +0.5 2.8 acetyltransferase compare
Dsui_2995 +0.5 1.3 hypothetical protein compare
Dsui_0425 +0.5 1.8 putative Fe-S oxidoreductase compare
Dsui_1042 +0.5 2.2 metal-dependent hydrolase compare
Dsui_3109 +0.5 2.2 cytochrome c, mono- and diheme variants family compare
Dsui_0470 +0.5 1.9 fructose-2,6-bisphosphatase compare
Dsui_1273 +0.5 1.8 Rhodanese-related sulfurtransferase compare
Dsui_0678 +0.5 2.0 hypothetical protein compare
Dsui_2154 +0.5 2.6 molybdopterin converting factor, large subunit compare
Dsui_1440 +0.5 2.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2052 +0.5 2.0 hypothetical protein compare
Dsui_2074 +0.5 1.5 phasin family protein compare
Dsui_3106 +0.5 2.4 hypothetical protein compare
Dsui_2333 +0.5 1.4 uracil phosphoribosyltransferase compare
Dsui_2150 +0.5 2.5 hypothetical protein compare
Dsui_2970 +0.5 1.6 putative Fe-S oxidoreductase compare
Dsui_2953 +0.5 2.8 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2741 +0.5 1.9 PAS domain S-box compare
Dsui_2334 +0.5 2.1 tRNA-dihydrouridine synthase compare
Dsui_2397 +0.5 2.1 cAMP-binding protein compare
Dsui_2151 +0.5 1.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_2706 +0.5 1.6 adenine phosphoribosyltransferase compare
Dsui_0122 +0.5 1.5 D-tyrosyl-tRNA(Tyr) deacylase compare
Dsui_2949 +0.5 1.2 Fe2+-dicitrate sensor, membrane component compare
Dsui_2759 +0.5 2.0 pseudouridine synthase family protein compare
Dsui_1149 +0.5 1.3 Zn-dependent protease with chaperone function compare
Dsui_2803 +0.5 2.5 GGDEF domain-containing protein compare
Dsui_2065 +0.4 2.8 hypothetical protein, contains double-stranded beta-helix domain compare
Dsui_0950 +0.4 1.5 acyl dehydratase compare
Dsui_2191 +0.4 1.1 squalene-associated FAD-dependent desaturase compare
Dsui_0964 +0.4 2.1 putative lipid carrier protein compare
Dsui_1668 +0.4 1.8 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase compare
Dsui_1311 +0.4 1.8 hypothetical protein compare
Dsui_2076 +0.4 1.3 cytochrome c, mono- and diheme variants family compare
Dsui_1541 +0.4 2.4 cytochrome c553 compare
Dsui_1045 +0.4 1.9 hypothetical protein compare
Dsui_0287 +0.4 1.0 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_2768 +0.4 1.8 uncharacterized protein involved in outer membrane biogenesis compare
Dsui_1058 +0.4 1.1 hypothetical protein compare
Dsui_0871 +0.4 0.9 hypothetical protein compare
Dsui_2991 +0.4 2.5 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1262 +0.4 2.6 TRAP transporter, DctM subunit compare
Dsui_1645 +0.4 1.6 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1120 +0.4 2.1 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_0567 +0.4 1.0 molybdenum-pterin binding domain protein compare
Dsui_0544 +0.4 1.4 flagellar basal body-associated protein compare
Dsui_2736 +0.4 1.3 glycine cleavage system H protein compare
Dsui_1433 +0.4 1.5 chemotaxis protein compare
Dsui_0214 +0.4 1.5 TIGR02594 family protein compare
Dsui_2733 +0.4 2.0 bacterioferritin compare
Dsui_1610 +0.4 1.7 Protein of unknown function (DUF3079) compare
Dsui_1829 +0.4 1.7 hemerythrin HHE cation binding domain-containing protein compare
Dsui_0459 +0.4 1.0 DNA polymerase I compare
Dsui_1621 +0.4 1.1 diacylglycerol kinase compare
Dsui_2407 +0.4 1.5 beta-propeller domain-containing protein, methanol dehydrogenase compare
Dsui_1022 +0.4 2.4 cell division protein compare
Dsui_0838 +0.4 2.3 hypothetical protein compare
Dsui_2935 +0.4 1.1 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1704 +0.4 1.9 flagellar motor stator protein MotA compare
Dsui_2698 +0.4 1.2 purine nucleoside phosphorylase compare
Dsui_2756 +0.4 0.5 hypothetical protein compare
Dsui_1905 +0.4 2.0 PAS domain S-box compare
Dsui_2872 +0.4 1.3 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_0435 +0.4 1.2 Sel1 repeat protein compare
Dsui_0014 +0.4 2.0 putative membrane protein compare
Dsui_1148 +0.4 1.6 putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain compare
Dsui_0460 +0.4 1.1 ADP-heptose:LPS heptosyltransferase compare
Dsui_3279 +0.4 1.3 formate dehydrogenase family accessory protein FdhD compare
Dsui_2732 +0.4 1.5 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_1879 +0.4 1.0 luciferase family oxidoreductase, group 1 compare
Dsui_1824 +0.4 1.8 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2971 +0.4 1.4 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_1263 +0.4 2.7 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Dsui_0021 +0.4 1.1 putative metalloendopeptidase compare
Dsui_2404 +0.4 1.2 ribosomal-protein-alanine acetyltransferase compare
Dsui_0304 +0.4 0.6 hypothetical protein compare
Dsui_0310 +0.4 1.4 acyl-CoA hydrolase compare
Dsui_0038 +0.4 2.3 HIT family hydrolase, diadenosine tetraphosphate hydrolase compare
Dsui_2672 +0.4 2.3 hypothetical protein compare
Dsui_1664 +0.4 1.2 putative periplasmic protein compare
Dsui_0738 +0.4 1.2 secondary thiamine-phosphate synthase enzyme compare
Dsui_2210 +0.4 2.0 transcriptional regulator compare
Dsui_2189 +0.4 1.2 acyl-CoA synthetase (NDP forming) compare
Dsui_1665 +0.4 1.6 hypothetical protein compare
Dsui_2259 +0.4 0.5 hypothetical protein compare
Dsui_0954 +0.4 1.3 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) compare
Dsui_2377 +0.4 1.2 FeS assembly protein IscX compare
Dsui_1226 +0.4 1.4 hypothetical protein compare
Dsui_2749 +0.4 2.5 putative acyltransferase compare
Dsui_3026 +0.4 1.1 hydrogenase maturation protease compare
Dsui_2273 +0.4 1.6 TonB-dependent siderophore receptor compare
Dsui_1442 +0.4 0.8 putative efflux protein, MATE family compare
Dsui_2754 +0.4 1.7 collagenase-like protease compare
Dsui_1972 +0.4 1.5 lytic murein transglycosylase B compare
Dsui_2090 +0.4 0.9 transcriptional regulator compare
Dsui_1012 +0.4 1.6 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0510 +0.4 1.0 ferredoxin-type protein, NapH/MauN family compare
Dsui_1037 +0.4 0.5 ribosomal protein L25, Ctc-form compare
Dsui_2060 +0.4 1.2 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_1590 +0.4 0.9 hypothetical protein compare
Dsui_0527 +0.4 1.3 hypothetical protein compare
Dsui_2343 +0.4 1.9 transcriptional regulator compare
Dsui_1653 +0.4 1.8 ferrous iron transporter FeoB compare
Dsui_0720 +0.4 2.1 ABC-2 type transporter, NodJ family compare
Dsui_2545 +0.4 2.4 transcriptional regulator, Spx/MgsR family compare
Dsui_2799 +0.4 1.5 oligopeptide/dipeptide ABC transporter, ATP-binding protein compare
Dsui_2924 +0.4 1.4 hypothetical protein compare
Dsui_3428 +0.4 1.0 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Dsui_1662 +0.4 1.0 Oxidoreductase NAD-binding domain/Flavodoxin compare
Dsui_0755 +0.4 1.8 hypothetical protein compare
Dsui_0618 +0.3 1.5 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_1797 +0.3 1.2 putative phage-type endonuclease compare
Dsui_1657 +0.3 2.4 carbohydrate-selective porin compare
Dsui_2956 +0.3 0.7 ABC-type cobalt transport system, periplasmic component compare
Dsui_0692 +0.3 1.6 hypothetical protein compare
Dsui_2678 +0.3 1.8 hypothetical protein compare
Dsui_2492 +0.3 2.1 site-specific recombinase, DNA invertase Pin compare
Dsui_1598 +0.3 1.9 hypothetical protein compare
Dsui_1428 +0.3 1.2 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase compare
Dsui_2348 +0.3 0.6 hypothetical protein compare
Dsui_0270 +0.3 1.3 transcriptional regulator compare
Dsui_3091 +0.3 2.0 integral membrane protein, TerC family compare
Dsui_3133 +0.3 0.5 hypothetical protein compare
Dsui_0442 +0.3 1.7 monofunctional biosynthetic peptidoglycan transglycosylase compare
Dsui_1176 +0.3 2.0 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_0448 +0.3 1.8 hypothetical protein compare
Dsui_2802 +0.3 1.4 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Dsui_0528 +0.3 1.0 hypothetical protein compare
Dsui_0789 +0.3 2.2 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0988 +0.3 2.0 hypothetical protein compare
Dsui_1747 +0.3 2.3 flagellar biosynthetic protein FliO compare
Dsui_2884 +0.3 0.8 dethiobiotin synthase compare
Dsui_1159 +0.3 1.9 hydrogenase expression/formation protein HypD compare
Dsui_0517 +0.3 2.0 Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) (from data) compare
Dsui_2487 +0.3 1.6 hypothetical protein compare
Dsui_1550 +0.3 2.0 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0132 +0.3 2.2 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0617 +0.3 0.8 hypothetical protein compare
Dsui_1661 +0.3 1.2 hypothetical protein compare
Dsui_1932 +0.3 1.3 transcriptional regulator compare
Dsui_2148 +0.3 1.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3373 +0.3 2.0 Na+/phosphate symporter compare
Dsui_2762 +0.3 1.0 Protein of unknown function (DUF3617) compare
Dsui_1646 +0.3 1.2 cAMP-binding protein compare
Dsui_2220 +0.3 0.8 hypothetical protein compare
Dsui_3168 +0.3 1.1 hypothetical protein compare
Dsui_1893 +0.3 0.8 putative membrane protein compare
Dsui_1718 +0.3 2.1 chemotaxis signal transduction protein compare
Dsui_2077 +0.3 1.3 cAMP-binding protein compare
Dsui_2312 +0.3 1.1 3-hydroxybutyrate dehydrogenase compare
Dsui_0537 +0.3 0.6 conserved protein of DIM6/NTAB family compare
Dsui_2499 +0.3 0.7 MerE protein compare
Dsui_0980 +0.3 1.7 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) compare
Dsui_1883 +0.3 1.6 ATPase component of ABC transporters with duplicated ATPase domain compare
Dsui_1170 +0.3 0.4 heme exporter protein CcmD compare
Dsui_2632 +0.3 1.2 hypothetical protein compare
Dsui_2393 +0.3 1.7 uncharacterized domain HDIG-containing protein compare
Dsui_2761 +0.3 0.9 hypothetical protein compare
Dsui_1615 +0.3 1.0 hypothetical protein compare
Dsui_2385 +0.3 2.0 transcription-repair coupling factor Mfd compare
Dsui_0945 +0.3 1.1 Iron-sulfur cluster assembly accessory protein compare
Dsui_0603 +0.3 1.0 pyridoxal phosphate enzyme, YggS family compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium acetate in Dechlorosoma suillum PS

For carbon source Sodium acetate across organisms