Experiment set1H16 for Dechlorosoma suillum PS

Compare to:

rich media

200 most important genes:

  gene name fitness t score description  
Dsui_1577 -3.4 -2.3 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0992 -3.0 -2.9 putative membrane protein compare
Dsui_0859 -2.9 -2.7 hypothetical protein compare
Dsui_1827 -2.9 -2.7 hypothetical protein compare
Dsui_0469 -2.8 -2.7 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2560 -2.5 -4.0 zonula occludens toxin compare
Dsui_3457 -2.3 -2.2 K+ transporter compare
Dsui_0255 -1.9 -1.7 hypothetical protein compare
Dsui_2586 -1.6 -4.3 type IV secretory pathway, VirB9 component compare
Dsui_1581 -1.6 -3.0 response regulator compare
Dsui_0434 -1.6 -3.6 ribonuclease, Rne/Rng family compare
Dsui_3484 -1.6 -1.8 putative permease compare
Dsui_3080 -1.6 -1.6 molecular chaperone GrpE (heat shock protein) compare
Dsui_1325 -1.5 -4.0 ADP-ribose pyrophosphatase compare
Dsui_2752 -1.5 -2.2 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_0543 -1.5 -5.5 malic enzyme compare
Dsui_1578 -1.4 -3.7 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_1947 -1.4 -2.0 nucleotide sugar dehydrogenase compare
Dsui_1970 -1.4 -3.7 metalloendopeptidase-like membrane protein compare
Dsui_0500 -1.4 -3.5 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0744 -1.4 -2.7 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_0401 -1.4 -1.8 nucleoside-diphosphate-sugar epimerase compare
Dsui_3467 -1.4 -2.5 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_1978 -1.3 -1.6 putative lipoprotein compare
Dsui_0465 -1.3 -2.0 ADP-heptose:LPS heptosyltransferase compare
Dsui_2117 -1.3 -1.9 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit compare
Dsui_2559 -1.3 -2.8 Protein of unknown function (DUF2523) compare
Dsui_2590 -1.2 -3.7 Pilin accessory protein (PilO) compare
Dsui_2604 -1.2 -2.6 hypothetical protein compare
Dsui_0099 -1.2 -2.3 putative periplasmic or secreted lipoprotein compare
Dsui_1534 -1.2 -1.2 ribosomal protein L33 compare
Dsui_2086 -1.2 -2.4 cytochrome c compare
Dsui_2599 -1.2 -3.0 hypothetical protein compare
Dsui_3240 -1.2 -4.4 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0706 -1.2 -1.6 hypothetical protein compare
Dsui_3054 -1.2 -1.6 phosphate ABC transporter, permease protein PstA compare
Dsui_1955 -1.2 -3.2 3'-5' exonuclease compare
Dsui_3194 -1.1 -3.8 pseudouridylate synthase I compare
Dsui_0015 -1.1 -1.8 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_3352 -1.1 -2.1 cAMP-binding protein compare
Dsui_2567 -1.1 -9.4 hypothetical protein compare
Dsui_0990 -1.1 -0.8 putative P-loop-containing kinase compare
Dsui_3220 -1.0 -1.5 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0549 -1.0 -3.1 queuosine biosynthesis protein QueC compare
Dsui_2981 -1.0 -1.0 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_2631 -1.0 -2.7 hypothetical protein compare
Dsui_2561 -1.0 -4.1 type II secretory pathway, component PulD compare
Dsui_1609 -1.0 -1.9 Thiopurine S-methyltransferase (TPMT) compare
Dsui_1275 -1.0 -2.2 protein-export chaperone SecB compare
Dsui_2589 -1.0 -3.8 type II secretory pathway, component PulD compare
Dsui_2594 -0.9 -3.4 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_3081 -0.9 -1.0 chaperone protein DnaK compare
Dsui_2358 -0.9 -2.1 signal transduction histidine kinase compare
Dsui_2610 -0.9 -2.8 single-stranded DNA-binding protein compare
Dsui_1652 -0.9 -1.1 FeoA-like protein compare
Dsui_2617 -0.9 -1.4 DNA recombination-dependent growth factor C compare
Dsui_2601 -0.9 -2.8 hypothetical protein compare
Dsui_2908 -0.9 -3.3 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0901 -0.9 -2.0 hypothetical protein compare
Dsui_2842 -0.9 -2.8 radical SAM pair-associated protein compare
Dsui_3508 -0.9 -0.9 exodeoxyribonuclease VII, small subunit compare
Dsui_2044 -0.9 -2.2 Rhodanese-related sulfurtransferase compare
Dsui_2248 -0.9 -1.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2615 -0.8 -3.1 hypothetical protein compare
Dsui_2582 -0.8 -3.6 hypothetical protein compare
Dsui_0258 -0.8 -2.9 sulfate ABC transporter, ATP-binding protein compare
Dsui_3130 -0.8 -1.1 tRNA-Leu compare
Dsui_3026 -0.8 -2.0 hydrogenase maturation protease compare
Dsui_0398 -0.8 -3.7 UDP-glucose-4-epimerase compare
Dsui_2027 -0.8 -1.8 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_3531 -0.8 -1.7 Protein of unknown function (DUF3619) compare
Dsui_2846 -0.8 -4.9 ATPase compare
Dsui_2600 -0.8 -1.6 hypothetical protein compare
Dsui_1446 -0.8 -1.9 succinyl-CoA synthetase, alpha subunit compare
Dsui_0477 -0.8 -1.5 tol-pal system protein YbgF compare
Dsui_2304 -0.8 -3.0 electron transfer flavoprotein, alpha subunit compare
Dsui_2277 -0.8 -1.7 Rhs element Vgr protein compare
Dsui_0044 -0.8 -2.0 exodeoxyribonuclease III compare
Dsui_1821 -0.8 -1.1 esterase/lipase compare
Dsui_0472 -0.8 -2.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
Dsui_3474 -0.8 -2.9 chemotaxis protein histidine kinase-like protein compare
Dsui_3239 -0.8 -4.1 acetyl-CoA acetyltransferase compare
Dsui_2305 -0.8 -3.3 electron transfer flavoprotein, beta subunit compare
Dsui_2076 -0.8 -1.9 cytochrome c, mono- and diheme variants family compare
Dsui_2576 -0.8 -3.1 hypothetical protein compare
Dsui_2603 -0.7 -3.2 hypothetical protein compare
Dsui_2607 -0.7 -1.3 hypothetical protein compare
Dsui_2608 -0.7 -4.1 topoisomerase IA compare
Dsui_1059 -0.7 -1.4 thiamine monophosphate synthase compare
Dsui_1084 -0.7 -4.9 bacteriophage protein gp37 compare
Dsui_0747 -0.7 -1.8 glutamate--cysteine ligase compare
Dsui_1445 -0.7 -2.2 succinyl-CoA synthetase, beta subunit compare
Dsui_2811 -0.7 -1.6 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_0507 -0.7 -1.6 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_3097 -0.7 -1.7 O-6-methylguanine DNA methyltransferase compare
Dsui_2585 -0.7 -3.1 type IV secretory pathway, component VirB8 compare
Dsui_3413 -0.7 -1.6 Fe-S oxidoreductase compare
Dsui_2613 -0.7 -2.4 integrating conjugative element protein, PFL_4669 family compare
Dsui_2563 -0.7 -1.8 hypothetical protein compare
Dsui_2026 -0.7 -2.5 hydrophobe/amphiphile efflux-1 (HAE1) family transporter compare
Dsui_2640 -0.7 -2.1 Cytochrome c compare
Dsui_1969 -0.7 -3.9 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_2609 -0.7 -1.8 hypothetical protein compare
Dsui_0520 -0.7 -4.3 transcriptional regulator compare
Dsui_3178 -0.7 -1.5 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_1316 -0.7 -1.8 hypothetical protein compare
Dsui_2591 -0.7 -2.7 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0651 -0.7 -1.2 tyrosine recombinase XerC compare
Dsui_3339 -0.7 -2.5 branched-chain amino acid aminotransferase, group I compare
Dsui_0657 -0.7 -3.9 methyl-accepting chemotaxis protein compare
Dsui_0505 -0.7 -3.3 7-cyano-7-deazaguanine reductase compare
Dsui_0260 -0.7 -3.2 sulfate ABC transporter, permease protein CysT compare
Dsui_0118 -0.7 -3.2 monothiol glutaredoxin, Grx4 family compare
Dsui_2867 -0.6 -0.8 surface antigen family protein compare
Dsui_2260 -0.6 -1.7 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_2605 -0.6 -3.0 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0544 -0.6 -1.6 flagellar basal body-associated protein compare
Dsui_2614 -0.6 -1.9 hypothetical protein compare
Dsui_2579 -0.6 -3.5 Flp pilus assembly protein, ATPase CpaF compare
Dsui_0704 -0.6 -3.7 RNA polymerase sigma-54 factor compare
Dsui_1796 -0.6 -3.7 phage/plasmid-related protein TIGR03299 compare
Dsui_2295 -0.6 -1.2 transcriptional regulator compare
Dsui_0175 -0.6 -1.3 hypothetical protein compare
Dsui_1403 -0.6 -1.4 putative NTP binding protein (contains STAS domain) compare
Dsui_3171 -0.6 -1.2 putative protein-disulfide isomerase compare
Dsui_2289 -0.6 -1.7 qaraquat-inducible protein B compare
Dsui_3133 -0.6 -0.7 hypothetical protein compare
Dsui_1321 -0.6 -3.3 ABC-type uncharacterized transport system, permease component compare
Dsui_1877 -0.6 -1.8 NADH:flavin oxidoreductase compare
Dsui_0259 -0.6 -2.9 sulfate ABC transporter, permease protein CysW compare
Dsui_3351 -0.6 -1.2 cytochrome c peroxidase compare
Dsui_0621 -0.6 -1.2 RNA polymerase sigma factor, sigma-70 family compare
Dsui_1462 -0.6 -1.2 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_1027 -0.6 -1.9 RNA methyltransferase, RsmD family compare
Dsui_3030 -0.6 -3.3 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit compare
Dsui_3323 -0.6 -1.9 tRNA-guanine transglycosylase, queuosine-34-forming compare
Dsui_3414 -0.6 -3.3 FAD/FMN-dependent dehydrogenase compare
Dsui_2621 -0.6 -3.3 ATPase involved in chromosome partitioning compare
Dsui_1297 -0.6 -1.6 biotin synthetase compare
Dsui_3397 -0.6 -3.8 Protein of unknown function (DUF1780) compare
Dsui_3415 -0.6 -2.6 FAD/FMN-dependent dehydrogenase compare
Dsui_1198 -0.6 -2.1 apolipoprotein N-acyltransferase compare
Dsui_2783 -0.6 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1402 -0.6 -1.7 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1356 -0.6 -1.0 hypothetical protein compare
Dsui_1760 -0.6 -3.7 putative O-linked N-acetylglucosamine transferase, SPINDLY family compare
Dsui_1138 -0.6 -2.1 hypothetical protein compare
Dsui_2046 -0.6 -1.5 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2189 -0.6 -1.6 acyl-CoA synthetase (NDP forming) compare
Dsui_2587 -0.6 -3.5 type IV secretory pathway, VirB10 component compare
Dsui_1759 -0.6 -2.3 flagellar hook-basal body complex protein FliE compare
Dsui_2620 -0.6 -2.9 hypothetical protein compare
Dsui_2864 -0.6 -1.8 signal transduction histidine kinase compare
Dsui_1026 -0.6 -1.7 putative Zn-dependent peptidase compare
Dsui_2553 -0.6 -2.1 Phage X family/Phage replication protein CRI compare
Dsui_2454 -0.6 -1.8 Positive regulator of sigma E activity compare
Dsui_2878 -0.6 -2.1 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_0085 -0.6 -4.7 GDP-mannose 4,6-dehydratase compare
Dsui_2632 -0.6 -1.3 hypothetical protein compare
Dsui_2577 -0.6 -3.9 type IV secretory pathway, VirB4 component compare
Dsui_2095 -0.6 -1.5 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_2316 -0.6 -1.0 hypothetical protein compare
Dsui_2574 -0.6 -3.5 integral membrane protein (PIN domain superfamily) compare
Dsui_2042 -0.6 -1.6 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_2251 -0.5 -1.8 signal transduction histidine kinase compare
Dsui_2341 -0.5 -2.1 ABC-type multidrug transport system, ATPase component compare
Dsui_2595 -0.5 -3.4 type II secretory pathway, pseudopilin PulG compare
Dsui_2644 -0.5 -2.1 heavy metal response regulator compare
Dsui_2598 -0.5 -3.8 hypothetical protein compare
Dsui_0979 -0.5 -1.9 TIGR00730 family protein compare
Dsui_2809 -0.5 -1.0 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_1773 -0.5 -4.1 type I secretion system ABC transporter, PrtD family compare
Dsui_2629 -0.5 -3.7 HD-GYP domain-containing protein compare
Dsui_2254 -0.5 -2.3 glycine/serine hydroxymethyltransferase compare
Dsui_2611 -0.5 -1.4 hypothetical protein compare
Dsui_1968 -0.5 -3.6 5''/3''-nucleotidase SurE compare
Dsui_1266 -0.5 -1.1 transcriptional regulator NrdR compare
Dsui_2220 -0.5 -1.0 hypothetical protein compare
Dsui_1579 -0.5 -2.4 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_3342 -0.5 -1.5 ketosteroid isomerase-like enzyme compare
Dsui_1795 -0.5 -2.5 hypothetical protein compare
Dsui_3290 -0.5 -0.8 4-hydroxybenzoate synthetase (chorismate lyase) compare
Dsui_0707 -0.5 -1.4 protein RecA compare
Dsui_1600 -0.5 -3.0 putative enzyme of heme biosynthesis compare
Dsui_2593 -0.5 -2.4 PilS N terminal protein compare
Dsui_1227 -0.5 -1.9 DNA/RNA helicase, superfamily I compare
Dsui_2555 -0.5 -1.2 Bacteriophage coat protein B compare
Dsui_3268 -0.5 -1.4 exodeoxyribonuclease VII, large subunit compare
Dsui_1550 -0.5 -2.3 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0568 -0.5 -2.6 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3468 -0.5 -1.7 Response regulator receiver domain protein,histidine kinase compare
Dsui_2592 -0.5 -2.9 type II secretory pathway, component PulF compare
Dsui_1077 -0.5 -3.6 hypothetical protein compare
Dsui_2745 -0.5 -0.7 methyl-accepting chemotaxis protein compare
Dsui_2166 -0.5 -1.2 Fe2+-dicitrate sensor, membrane component compare
Dsui_2597 -0.5 -3.3 tyrosine recombinase XerD compare
Dsui_0251 -0.5 -1.3 putative S-adenosylmethionine-dependent methyltransferase, YraL family compare
Dsui_0860 -0.5 -2.2 hypothetical protein compare
Dsui_0656 -0.5 -3.4 chemotaxis protein histidine kinase-like protein compare
Dsui_2673 -0.5 -1.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in alp rich experiments